RNA–Protein interactions for RNA: ENST00000565511.5

RAB40C-209, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 783 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-209ENST00000565511 RBM38Q9H0Z9 239 aaKnown RBP17.02■□□□□ 0.32
RAB40C-209ENST00000565511 ZNF705FA8MVS1 300 aaPredicted RBP17.01■□□□□ 0.31
RAB40C-209ENST00000565511 WRBO00258 174 aa17.01■□□□□ 0.31
RAB40C-209ENST00000565511 ZNF705DP0CH99 300 aaPredicted RBP17.01■□□□□ 0.31
RAB40C-209ENST00000565511 ZNF705BP0CI00 300 aaPredicted RBP17.01■□□□□ 0.31
RAB40C-209ENST00000565511 GATA2P23769 480 aaPredicted RBP17.01■□□□□ 0.31
RAB40C-209ENST00000565511 PSMB3P49720 205 aa17.01■□□□□ 0.31
RAB40C-209ENST00000565511 AP3S2P59780 193 aa17.01■□□□□ 0.31
RAB40C-209ENST00000565511 GGNBP1Q5YKI7 109 aa17.01■□□□□ 0.31
RAB40C-209ENST00000565511 FOXI2Q6ZQN5 318 aa17.01■□□□□ 0.31
RAB40C-209ENST00000565511 SLC35B3Q9H1N7 401 aa17.01■□□□□ 0.31
RAB40C-209ENST00000565511 SLC25A32Q9H2D1 315 aa17.01■□□□□ 0.31
RAB40C-209ENST00000565511 H3BP45 60 aa17■□□□□ 0.31
RAB40C-209ENST00000565511 NUTF2P61970 127 aaKnown RBP17■□□□□ 0.31
RAB40C-209ENST00000565511 RAB11AP62491 216 aa17■□□□□ 0.31
RAB40C-209ENST00000565511 C1orf194Q5T5A4 169 aa17■□□□□ 0.31
RAB40C-209ENST00000565511 SLC25A21Q9BQT8 299 aaPredicted RBP17■□□□□ 0.31
RAB40C-209ENST00000565511 RNF126Q9BV68 326 aa17■□□□□ 0.31
RAB40C-209ENST00000565511 DEFB131BA0A096LNP1 70 aa16.99■□□□□ 0.31
RAB40C-209ENST00000565511 SNRPGP15A8MWD9 76 aa16.99■□□□□ 0.31
RAB40C-209ENST00000565511 SYNGR2O43760 224 aa16.99■□□□□ 0.31
RAB40C-209ENST00000565511 AMBPP02760 352 aa16.99■□□□□ 0.31
RAB40C-209ENST00000565511 PPP1R14BQ96C90 147 aa16.99■□□□□ 0.31
RAB40C-209ENST00000565511 TMED3Q9Y3Q3 217 aa16.99■□□□□ 0.31
RAB40C-209ENST00000565511 IGHV3OR16-12A0A075B7B8 117 aa16.98■□□□□ 0.31
RAB40C-209ENST00000565511 ADAP1O75689 374 aa16.98■□□□□ 0.31
RAB40C-209ENST00000565511 OR8I2Q8N0Y5 310 aa16.98■□□□□ 0.31
RAB40C-209ENST00000565511 CENPSQ8N2Z9 138 aa16.98■□□□□ 0.31
RAB40C-209ENST00000565511 OR4B1Q8NGF8 309 aa16.98■□□□□ 0.31
RAB40C-209ENST00000565511 COQ8AQ8NI60 647 aa16.98■□□□□ 0.31
RAB40C-209ENST00000565511 NEU1Q99519 415 aa16.98■□□□□ 0.31
RAB40C-209ENST00000565511 SRRQ9GZT4 340 aa16.98■□□□□ 0.31
RAB40C-209ENST00000565511 MED6O75586 246 aa16.97■□□□□ 0.31
RAB40C-209ENST00000565511 FABP1P07148 127 aa16.97■□□□□ 0.31
RAB40C-209ENST00000565511 ID1P41134 155 aa16.97■□□□□ 0.31
RAB40C-209ENST00000565511 EMP1P54849 157 aa16.97■□□□□ 0.31
RAB40C-209ENST00000565511 SPANXN5Q5MJ07 72 aa16.97■□□□□ 0.31
RAB40C-209ENST00000565511 PFDN2Q9UHV9 154 aa16.97■□□□□ 0.31
RAB40C-209ENST00000565511 FLVCR2Q9UPI3 526 aa16.97■□□□□ 0.31
RAB40C-209ENST00000565511 KIAA1109Q2LD37 5005 aa16.96■□□□□ 0.31
RAB40C-209ENST00000565511 A0A0J9YX75 114 aa16.96■□□□□ 0.31
RAB40C-209ENST00000565511 CCDC160A6NGH7 325 aa16.96■□□□□ 0.31
RAB40C-209ENST00000565511 FAM78BQ5VT40 261 aa16.96■□□□□ 0.31
RAB40C-209ENST00000565511 ACOT7LQ6ZUV0 252 aa16.96■□□□□ 0.31
RAB40C-209ENST00000565511 C1orf158Q8N1D5 194 aa16.96■□□□□ 0.31
RAB40C-209ENST00000565511 CLUHP3Q96NS8 147 aa16.96■□□□□ 0.31
RAB40C-209ENST00000565511 CIB3Q96Q77 187 aaPredicted RBP16.96■□□□□ 0.31
RAB40C-209ENST00000565511 KRTAP17-1Q9BYP8 105 aa16.96■□□□□ 0.31
RAB40C-209ENST00000565511 SLC25A22Q9H936 323 aa16.96■□□□□ 0.31
RAB40C-209ENST00000565511 PLA2G2EQ9NZK7 142 aa16.96■□□□□ 0.31
RAB40C-209ENST00000565511 ZNF98A6NK75 572 aa16.95■□□□□ 0.3
RAB40C-209ENST00000565511 ISLRO14498 428 aa16.95■□□□□ 0.3
RAB40C-209ENST00000565511 CCNKO75909 580 aa16.95■□□□□ 0.3
RAB40C-209ENST00000565511 S100A5P33763 92 aa16.95■□□□□ 0.3
RAB40C-209ENST00000565511 PAX9P55771 341 aa16.95■□□□□ 0.3
RAB40C-209ENST00000565511 BAK1Q16611 211 aa16.95■□□□□ 0.3
RAB40C-209ENST00000565511 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.95■□□□□ 0.3
RAB40C-209ENST00000565511 PIGBOS1A0A0B4J2F0 54 aa16.94■□□□□ 0.3
RAB40C-209ENST00000565511 C9orf170A2RU37 121 aa16.94■□□□□ 0.3
RAB40C-209ENST00000565511 POLR2GP62487 172 aaKnown RBP eCLIP16.94■□□□□ 0.3
RAB40C-209ENST00000565511 IGFL4Q6B9Z1 124 aa16.94■□□□□ 0.3
RAB40C-209ENST00000565511 DEDD2Q8WXF8 326 aa16.94■□□□□ 0.3
RAB40C-209ENST00000565511 SDHCQ99643 169 aaPredicted RBP16.94■□□□□ 0.3
RAB40C-209ENST00000565511 RSG1Q9BU20 258 aa16.94■□□□□ 0.3
RAB40C-209ENST00000565511 A8MTW9 85 aa16.93■□□□□ 0.3
RAB40C-209ENST00000565511 ORM2P19652 201 aa16.93■□□□□ 0.3
RAB40C-209ENST00000565511 PSG9Q00887 426 aa16.93■□□□□ 0.3
RAB40C-209ENST00000565511 AKR1C1Q04828 323 aa16.93■□□□□ 0.3
RAB40C-209ENST00000565511 AMTNQ6UX39 209 aa16.93■□□□□ 0.3
RAB40C-209ENST00000565511 DOK5Q9P104 306 aa16.93■□□□□ 0.3
RAB40C-209ENST00000565511 TRAV8-2A0A0B4J237 113 aa16.92■□□□□ 0.3
RAB40C-209ENST00000565511 PMS2P5A8MQ11 134 aa16.92■□□□□ 0.3
RAB40C-209ENST00000565511 BTCP35070 178 aa16.92■□□□□ 0.3
RAB40C-209ENST00000565511 ID3Q02535 119 aa16.92■□□□□ 0.3
RAB40C-209ENST00000565511 OR4D5Q8NGN0 318 aa16.92■□□□□ 0.3
RAB40C-209ENST00000565511 C16orf92Q96LL3 132 aa16.92■□□□□ 0.3
RAB40C-209ENST00000565511 DKK2Q9UBU2 259 aa16.92■□□□□ 0.3
RAB40C-209ENST00000565511 STRAPQ9Y3F4 350 aaKnown RBP16.92■□□□□ 0.3
RAB40C-209ENST00000565511 RFNGQ9Y644 331 aa16.92■□□□□ 0.3
RAB40C-209ENST00000565511 NDUFB6O95139 128 aa16.91■□□□□ 0.3
RAB40C-209ENST00000565511 FAM222AQ5U5X8 452 aa16.91■□□□□ 0.3
RAB40C-209ENST00000565511 BPIFCQ8NFQ6 507 aa16.91■□□□□ 0.3
RAB40C-209ENST00000565511 OR1B1Q8NGR6 318 aa16.91■□□□□ 0.3
RAB40C-209ENST00000565511 SLC45A2Q9UMX9 530 aa16.91■□□□□ 0.3
RAB40C-209ENST00000565511 PKHD1P08F94 4074 aa16.91■□□□□ 0.3
RAB40C-209ENST00000565511 SMIM9A6NGZ8 99 aa16.9■□□□□ 0.3
RAB40C-209ENST00000565511 H3BRN7 92 aa16.9■□□□□ 0.3
RAB40C-209ENST00000565511 SPART-AS1P0CW21 52 aa16.9■□□□□ 0.3
RAB40C-209ENST00000565511 GALR1P47211 349 aa16.9■□□□□ 0.3
RAB40C-209ENST00000565511 UBE2MP61081 183 aaKnown RBP16.9■□□□□ 0.3
RAB40C-209ENST00000565511 RPP30P78346 268 aaKnown RBP16.9■□□□□ 0.3
RAB40C-209ENST00000565511 EBLN2Q6P2I7 272 aa16.9■□□□□ 0.3
RAB40C-209ENST00000565511 RNF182Q8N6D2 247 aa16.9■□□□□ 0.3
RAB40C-209ENST00000565511 RPRMQ9NS64 109 aa16.9■□□□□ 0.3
RAB40C-209ENST00000565511 LINC00854A0A1B0GVQ3 168 aa16.89■□□□□ 0.29
RAB40C-209ENST00000565511 CFDP00746 253 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-209ENST00000565511 PRM2P04554 102 aa16.89■□□□□ 0.29
RAB40C-209ENST00000565511 PRB4P10163 310 aaPredicted RBP16.89■□□□□ 0.29
RAB40C-209ENST00000565511 SPATA31B1PQ5VZV4 182 aa16.89■□□□□ 0.29
RAB40C-209ENST00000565511 CYP2G1PQ6ZSU1 146 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms