RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 PLA2G10O15496 165 aa6.13□□□□□ -1.43
CAPN3-213ENST00000565173 LYRM1O43325 122 aa6.13□□□□□ -1.43
CAPN3-213ENST00000565173 IFNA10P01566 189 aa6.13□□□□□ -1.43
CAPN3-213ENST00000565173 AKR1C4P17516 323 aa6.13□□□□□ -1.43
CAPN3-213ENST00000565173 GPX4P36969 197 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-213ENST00000565173 SMCO1Q147U7 214 aa6.13□□□□□ -1.43
CAPN3-213ENST00000565173 GSG1LQ6UXU4 331 aa6.13□□□□□ -1.43
CAPN3-213ENST00000565173 LINC00336Q6ZUF6 198 aa6.13□□□□□ -1.43
CAPN3-213ENST00000565173 LGI3Q8N145 548 aa6.13□□□□□ -1.43
CAPN3-213ENST00000565173 DTD1Q8TEA8 209 aa6.13□□□□□ -1.43
CAPN3-213ENST00000565173 CLUHP3Q96NS8 147 aa6.13□□□□□ -1.43
CAPN3-213ENST00000565173 SLC25A21Q9BQT8 299 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-213ENST00000565173 SAV1Q9H4B6 383 aaPredicted RBP6.13□□□□□ -1.43
CAPN3-213ENST00000565173 SHPKQ9UHJ6 478 aa6.13□□□□□ -1.43
CAPN3-213ENST00000565173 HSPG2P98160 4391 aa6.13□□□□□ -1.43
CAPN3-213ENST00000565173 SMIM9A6NGZ8 99 aa6.12□□□□□ -1.43
CAPN3-213ENST00000565173 RTL8CO15255 209 aa6.12□□□□□ -1.43
CAPN3-213ENST00000565173 UPK1BO75841 260 aa6.12□□□□□ -1.43
CAPN3-213ENST00000565173 NDUFB6O95139 128 aa6.12□□□□□ -1.43
CAPN3-213ENST00000565173 IGKV3-20P01619 116 aa6.12□□□□□ -1.43
CAPN3-213ENST00000565173 P0DMU3 169 aa6.12□□□□□ -1.43
CAPN3-213ENST00000565173 FAM231AP0DMU4 169 aa6.12□□□□□ -1.43
CAPN3-213ENST00000565173 FAM231CP0DMU5 169 aa6.12□□□□□ -1.43
CAPN3-213ENST00000565173 FXYD7P58549 80 aa6.12□□□□□ -1.43
CAPN3-213ENST00000565173 OR8G2PQ6IF36 304 aa6.12□□□□□ -1.43
CAPN3-213ENST00000565173 CENPSQ8N2Z9 138 aa6.12□□□□□ -1.43
CAPN3-213ENST00000565173 C17orf77Q96MU5 243 aa6.12□□□□□ -1.43
CAPN3-213ENST00000565173 NDUFAF3Q9BU61 184 aa6.12□□□□□ -1.43
CAPN3-213ENST00000565173 PLA2G2EQ9NZK7 142 aa6.12□□□□□ -1.43
CAPN3-213ENST00000565173 KCNIP3Q9Y2W7 256 aa6.12□□□□□ -1.43
CAPN3-213ENST00000565173 IGKV1OR2-108A0A075B7D4 117 aa6.11□□□□□ -1.43
CAPN3-213ENST00000565173 PITX3O75364 302 aa6.11□□□□□ -1.43
CAPN3-213ENST00000565173 SPART-AS1P0CW21 52 aa6.11□□□□□ -1.43
CAPN3-213ENST00000565173 ANXA3P12429 323 aa6.11□□□□□ -1.43
CAPN3-213ENST00000565173 VAMP1P23763 118 aa6.11□□□□□ -1.43
CAPN3-213ENST00000565173 BTCP35070 178 aa6.11□□□□□ -1.43
CAPN3-213ENST00000565173 PSMB3P49720 205 aa6.11□□□□□ -1.43
CAPN3-213ENST00000565173 EMP1P54849 157 aa6.11□□□□□ -1.43
CAPN3-213ENST00000565173 ATP5IP56385 69 aaPredicted RBP6.11□□□□□ -1.43
CAPN3-213ENST00000565173 C1orf194Q5T5A4 169 aa6.11□□□□□ -1.43
CAPN3-213ENST00000565173 MZT2BQ6NZ67 158 aa6.11□□□□□ -1.43
CAPN3-213ENST00000565173 FOXI2Q6ZQN5 318 aa6.11□□□□□ -1.43
CAPN3-213ENST00000565173 C1orf158Q8N1D5 194 aa6.11□□□□□ -1.43
CAPN3-213ENST00000565173 LINC00052Q96N35 136 aa6.11□□□□□ -1.43
CAPN3-213ENST00000565173 PBDC1Q9BVG4 233 aa6.11□□□□□ -1.43
CAPN3-213ENST00000565173 SLC35B3Q9H1N7 401 aa6.11□□□□□ -1.43
CAPN3-213ENST00000565173 DKK2Q9UBU2 259 aa6.11□□□□□ -1.43
CAPN3-213ENST00000565173 FLVCR2Q9UPI3 526 aa6.11□□□□□ -1.43
CAPN3-213ENST00000565173 FAM240BA0A1B0GVZ2 78 aa6.1□□□□□ -1.43
CAPN3-213ENST00000565173 TMEM189A5PLL7 270 aa6.1□□□□□ -1.43
CAPN3-213ENST00000565173 PRSS29PA6NIE9 313 aa6.1□□□□□ -1.43
CAPN3-213ENST00000565173 ZFP92A6NM28 416 aa6.1□□□□□ -1.43
CAPN3-213ENST00000565173 SNRPGP15A8MWD9 76 aa6.1□□□□□ -1.43
CAPN3-213ENST00000565173 F6UB75 175 aa6.1□□□□□ -1.43
CAPN3-213ENST00000565173 M0R2N4 97 aa6.1□□□□□ -1.43
CAPN3-213ENST00000565173 PAX9P55771 341 aa6.1□□□□□ -1.43
CAPN3-213ENST00000565173 IFITM3Q01628 133 aa6.1□□□□□ -1.43
CAPN3-213ENST00000565173 ASAH1Q13510 395 aa6.1□□□□□ -1.43
CAPN3-213ENST00000565173 LGALS9BQ3B8N2 356 aa6.1□□□□□ -1.43
CAPN3-213ENST00000565173 TMEM128Q5BJH2 165 aa6.1□□□□□ -1.43
CAPN3-213ENST00000565173 FAM222AQ5U5X8 452 aa6.1□□□□□ -1.43
CAPN3-213ENST00000565173 Q6ZR54 194 aa6.1□□□□□ -1.43
CAPN3-213ENST00000565173 THAP8Q8NA92 274 aa6.1□□□□□ -1.43
CAPN3-213ENST00000565173 C20orf173Q96LM9 149 aa6.1□□□□□ -1.43
CAPN3-213ENST00000565173 TRGV9Q99603 122 aa6.1□□□□□ -1.43
CAPN3-213ENST00000565173 RFNGQ9Y644 331 aa6.1□□□□□ -1.43
CAPN3-213ENST00000565173 TRAV6A0A075B6T7 132 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 IGHV3OR16-12A0A075B7B8 117 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 A0A0J9YX75 114 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 A8MTW9 85 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 PRSS46E5RG02 174 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 ISLRO14498 428 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 SFT2D2O95562 160 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 TCRBP04435 133 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 MED14OSP0DP75 135 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 ANXA7P20073 488 aaKnown RBP6.09□□□□□ -1.43
CAPN3-213ENST00000565173 NUP62P37198 522 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-213ENST00000565173 ID1P41134 155 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 DEFA1P59665 94 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 DEFA3P59666 94 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 LYZP61626 148 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 SRPXP78539 464 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 PSG9Q00887 426 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 PPP1R1AQ13522 171 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 OR2F1Q13607 317 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 OXA1LQ15070 435 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 C4orf46Q504U0 113 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 FAM78BQ5VT40 261 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 SPATA31B1PQ5VZV4 182 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 AMTNQ6UX39 209 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 TMEM182Q6ZP80 229 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-213ENST00000565173 OR4B1Q8NGF8 309 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 OR1S1Q8NH92 325 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 ENKURQ8TC29 256 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 FAM210BQ96KR6 192 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 NIPSNAP3BQ9BS92 247 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 C20orf85Q9H1P6 137 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 PFDN2Q9UHV9 154 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 LRP1BQ9NZR2 4599 aa6.09□□□□□ -1.43
CAPN3-213ENST00000565173 DUXBA0A1W2PPF3 345 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms