RNA–Protein interactions for RNA: ENST00000564899.1

SF3B3-205, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-205ENST00000564899 CITED2Q99967 270 aaPredicted RBP8.52□□□□□ -1.05
SF3B3-205ENST00000564899 ACTR3CQ9C0K3 210 aaPredicted RBP8.52□□□□□ -1.05
SF3B3-205ENST00000564899 SLC25A22Q9H936 323 aa8.52□□□□□ -1.05
SF3B3-205ENST00000564899 TSSC4Q9Y5U2 329 aaPredicted RBP8.52□□□□□ -1.05
SF3B3-205ENST00000564899 IGHV4OR15-8A0A075B7B6 117 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 A0A087WW49 117 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 ELOA3CA0A087WX78 387 aaPredicted RBP8.51□□□□□ -1.05
SF3B3-205ENST00000564899 A0A1W2PPV4 95 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 WI2-2373I1.2A0A1W2PRP0 233 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 SEC14L6B5MCN3 397 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 I3L521 148 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 NDUFA4O00483 81 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 HSPB1P04792 205 aaKnown RBP8.51□□□□□ -1.05
SF3B3-205ENST00000564899 NMBP08949 121 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 RHOBP62745 196 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 BLOC1S1P78537 153 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 USF2Q15853 346 aaPredicted RBP8.51□□□□□ -1.05
SF3B3-205ENST00000564899 ZNF726P1Q15940 193 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 FAM78BQ5VT40 261 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 C10orf113Q5VZT2 155 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 SPATA31B1PQ5VZV4 182 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 TOMM20LQ6UXN7 152 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 PATE2Q6UY27 113 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 RPP25LQ8N5L8 163 aaKnown RBP8.51□□□□□ -1.05
SF3B3-205ENST00000564899 TMEM37Q8WXS4 190 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 SAT2Q96F10 170 aaPredicted RBP8.51□□□□□ -1.05
SF3B3-205ENST00000564899 RCC1LQ96I51 464 aaKnown RBP8.51□□□□□ -1.05
SF3B3-205ENST00000564899 RNF2Q99496 336 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 ZFAND3Q9H8U3 227 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 DNAJC4Q9NNZ3 241 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 HIGD1AQ9Y241 93 aa8.51□□□□□ -1.05
SF3B3-205ENST00000564899 CTXND1A0A1B0GTU2 59 aa8.5□□□□□ -1.05
SF3B3-205ENST00000564899 A0A1W2PRX2 142 aa8.5□□□□□ -1.05
SF3B3-205ENST00000564899 EIF3GO75821 320 aaKnown RBP eCLIP8.5□□□□□ -1.05
SF3B3-205ENST00000564899 COL7A1Q02388 2944 aa8.5□□□□□ -1.05
SF3B3-205ENST00000564899 RPEL1Q2QD12 228 aa8.5□□□□□ -1.05
SF3B3-205ENST00000564899 DEFB136Q30KP8 78 aa8.5□□□□□ -1.05
SF3B3-205ENST00000564899 LCN15Q6UWW0 184 aa8.5□□□□□ -1.05
SF3B3-205ENST00000564899 C8orf86Q6ZUL3 223 aa8.5□□□□□ -1.05
SF3B3-205ENST00000564899 SSX7Q7RTT5 188 aa8.5□□□□□ -1.05
SF3B3-205ENST00000564899 RAB24Q969Q5 203 aa8.5□□□□□ -1.05
SF3B3-205ENST00000564899 UHRF2Q96PU4 802 aa8.5□□□□□ -1.05
SF3B3-205ENST00000564899 C20orf24Q9BUV8 137 aa8.5□□□□□ -1.05
SF3B3-205ENST00000564899 MRPL32Q9BYC8 188 aaKnown RBP8.5□□□□□ -1.05
SF3B3-205ENST00000564899 SEPSECSQ9HD40 501 aaKnown RBP8.5□□□□□ -1.05
SF3B3-205ENST00000564899 MRPL27Q9P0M9 148 aaKnown RBP8.5□□□□□ -1.05
SF3B3-205ENST00000564899 FUT9Q9Y231 359 aa8.5□□□□□ -1.05
SF3B3-205ENST00000564899 EPPK1P58107 5090 aaKnown RBP8.5□□□□□ -1.05
SF3B3-205ENST00000564899 IGHV3OR16-8A0A075B7F1 116 aa8.49□□□□□ -1.05
SF3B3-205ENST00000564899 MAP1LC3B2A6NCE7 125 aa8.49□□□□□ -1.05
SF3B3-205ENST00000564899 LINC01619G3V211 115 aa8.49□□□□□ -1.05
SF3B3-205ENST00000564899 HMGB3O15347 200 aaKnown RBP8.49□□□□□ -1.05
SF3B3-205ENST00000564899 PRB2P02812 416 aaPredicted RBP8.49□□□□□ -1.05
SF3B3-205ENST00000564899 H2AFB1P0C5Y9 115 aa8.49□□□□□ -1.05
SF3B3-205ENST00000564899 ZP3P21754 424 aa8.49□□□□□ -1.05
SF3B3-205ENST00000564899 FAM106AQ4KMX7 169 aa8.49□□□□□ -1.05
SF3B3-205ENST00000564899 CLLU1Q5K131 121 aa8.49□□□□□ -1.05
SF3B3-205ENST00000564899 UNQ9165/PRO28630Q6UXU0 137 aa8.49□□□□□ -1.05
SF3B3-205ENST00000564899 MIR17HGQ75NE6 70 aa8.49□□□□□ -1.05
SF3B3-205ENST00000564899 LINC00305Q7Z4B0 112 aa8.49□□□□□ -1.05
SF3B3-205ENST00000564899 S100A7AQ86SG5 101 aa8.49□□□□□ -1.05
SF3B3-205ENST00000564899 OR1N2Q8NGR9 330 aa8.49□□□□□ -1.05
SF3B3-205ENST00000564899 SFT2D1Q8WV19 159 aa8.49□□□□□ -1.05
SF3B3-205ENST00000564899 TMEM190Q8WZ59 177 aa8.49□□□□□ -1.05
SF3B3-205ENST00000564899 DPF1Q92782 380 aa8.49□□□□□ -1.05
SF3B3-205ENST00000564899 SLC25A39Q9BZJ4 359 aaPredicted RBP8.49□□□□□ -1.05
SF3B3-205ENST00000564899 MAP1LC3BQ9GZQ8 125 aa8.49□□□□□ -1.05
SF3B3-205ENST00000564899 RABAC1Q9UI14 185 aa8.49□□□□□ -1.05
SF3B3-205ENST00000564899 DNAH9Q9NYC9 4486 aa8.49□□□□□ -1.05
SF3B3-205ENST00000564899 A0A1B0GV50 99 aa8.48□□□□□ -1.05
SF3B3-205ENST00000564899 ZNF320A2RRD8 509 aa8.48□□□□□ -1.05
SF3B3-205ENST00000564899 H3BRN7 92 aa8.48□□□□□ -1.05
SF3B3-205ENST00000564899 HBE1P02100 147 aa8.48□□□□□ -1.05
SF3B3-205ENST00000564899 S100A7P31151 101 aa8.48□□□□□ -1.05
SF3B3-205ENST00000564899 HOXD3P31249 432 aaPredicted RBP8.48□□□□□ -1.05
SF3B3-205ENST00000564899 TAS2R45P59539 299 aa8.48□□□□□ -1.05
SF3B3-205ENST00000564899 MORN5Q5VZ52 161 aa8.48□□□□□ -1.05
SF3B3-205ENST00000564899 GPHB5Q86YW7 130 aa8.48□□□□□ -1.05
SF3B3-205ENST00000564899 OR11H1Q8NG94 326 aa8.48□□□□□ -1.05
SF3B3-205ENST00000564899 MBD3L1Q8WWY6 194 aa8.48□□□□□ -1.05
SF3B3-205ENST00000564899 DUX3Q96PT4 197 aa8.48□□□□□ -1.05
SF3B3-205ENST00000564899 METTL26Q96S19 204 aa8.48□□□□□ -1.05
SF3B3-205ENST00000564899 SHANK2-AS3Q9BTD1 123 aa8.48□□□□□ -1.05
SF3B3-205ENST00000564899 SCRT1Q9BWW7 348 aa8.48□□□□□ -1.05
SF3B3-205ENST00000564899 HRH4Q9H3N8 390 aa8.48□□□□□ -1.05
SF3B3-205ENST00000564899 TECRQ9NZ01 308 aaKnown RBP8.48□□□□□ -1.05
SF3B3-205ENST00000564899 TENM3Q9P273 2699 aa8.47□□□□□ -1.05
SF3B3-205ENST00000564899 TRAV5A0A0B4J249 113 aa8.47□□□□□ -1.05
SF3B3-205ENST00000564899 TEX46H3BTG2 121 aa8.47□□□□□ -1.05
SF3B3-205ENST00000564899 ZNF207O43670 478 aaKnown RBP8.47□□□□□ -1.05
SF3B3-205ENST00000564899 STAG3L2P0CL84 134 aa8.47□□□□□ -1.05
SF3B3-205ENST00000564899 STAG3L3P0CL85 134 aa8.47□□□□□ -1.05
SF3B3-205ENST00000564899 C8orf88P0DMB2 117 aa8.47□□□□□ -1.05
SF3B3-205ENST00000564899 SLURP1P55000 103 aa8.47□□□□□ -1.05
SF3B3-205ENST00000564899 FGF8P55075 233 aaPredicted RBP8.47□□□□□ -1.05
SF3B3-205ENST00000564899 NSUN5P1Q3KNT7 163 aa8.47□□□□□ -1.05
SF3B3-205ENST00000564899 KHDC3LQ587J8 217 aa8.47□□□□□ -1.05
SF3B3-205ENST00000564899 REC114Q7Z4M0 266 aa8.47□□□□□ -1.05
SF3B3-205ENST00000564899 NDUFA11Q86Y39 141 aa8.47□□□□□ -1.05
SF3B3-205ENST00000564899 IQCF2Q8IXL9 164 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms