RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 SPTBN1Q01082 2364 aaKnown RBP13.13□□□□□ -0.31
LINC00554-201ENST00000564841 FNDC10F2Z333 226 aa13.13□□□□□ -0.31
LINC00554-201ENST00000564841 LIPFP07098 398 aa13.13□□□□□ -0.31
LINC00554-201ENST00000564841 REG1BP48304 166 aa13.13□□□□□ -0.31
LINC00554-201ENST00000564841 PET117Q6UWS5 81 aa13.13□□□□□ -0.31
LINC00554-201ENST00000564841 FAM231DQ6ZW35 169 aa13.13□□□□□ -0.31
LINC00554-201ENST00000564841 IFI27L2Q9H2X8 130 aa13.13□□□□□ -0.31
LINC00554-201ENST00000564841 MOSP00540 346 aa13.13□□□□□ -0.31
LINC00554-201ENST00000564841 ZNRF1Q8ND25 227 aa13.13□□□□□ -0.31
LINC00554-201ENST00000564841 NEU4Q8WWR8 484 aaPredicted RBP13.13□□□□□ -0.31
LINC00554-201ENST00000564841 CHCHD1Q96BP2 118 aaKnown RBP13.13□□□□□ -0.31
LINC00554-201ENST00000564841 JKAMPQ9P055 326 aa13.13□□□□□ -0.31
LINC00554-201ENST00000564841 PPIAL4EA0A075B759 164 aa13.12□□□□□ -0.31
LINC00554-201ENST00000564841 PPIAL4FP0DN26 164 aa13.12□□□□□ -0.31
LINC00554-201ENST00000564841 SEC11AP67812 179 aa13.12□□□□□ -0.31
LINC00554-201ENST00000564841 LINC01545Q5VT33 79 aa13.12□□□□□ -0.31
LINC00554-201ENST00000564841 H3BRM9 83 aa13.12□□□□□ -0.31
LINC00554-201ENST00000564841 IGHG3P01860 377 aa13.12□□□□□ -0.31
LINC00554-201ENST00000564841 OR5AL1P0C617 328 aa13.12□□□□□ -0.31
LINC00554-201ENST00000564841 TMEM177Q53S58 311 aa13.12□□□□□ -0.31
LINC00554-201ENST00000564841 PAXXQ9BUH6 204 aa13.12□□□□□ -0.31
LINC00554-201ENST00000564841 MS4A6AQ9H2W1 248 aa13.12□□□□□ -0.31
LINC00554-201ENST00000564841 TRGV8A0A0C4DH27 118 aa13.11□□□□□ -0.31
LINC00554-201ENST00000564841 CHEK1O14757 476 aa13.11□□□□□ -0.31
LINC00554-201ENST00000564841 APOHP02749 345 aaPredicted RBP13.11□□□□□ -0.31
LINC00554-201ENST00000564841 NBL1P41271 181 aa13.11□□□□□ -0.31
LINC00554-201ENST00000564841 PCP2Q8IVA1 136 aa13.11□□□□□ -0.31
LINC00554-201ENST00000564841 TMEM14BQ9NUH8 114 aa13.11□□□□□ -0.31
LINC00554-201ENST00000564841 TRAV8-1A0A0A6YYK1 113 aa13.11□□□□□ -0.31
LINC00554-201ENST00000564841 MGST3O14880 152 aa13.11□□□□□ -0.31
LINC00554-201ENST00000564841 WDR82Q6UXN9 313 aa13.11□□□□□ -0.31
LINC00554-201ENST00000564841 PATE2Q6UY27 113 aa13.11□□□□□ -0.31
LINC00554-201ENST00000564841 DEFB108BQ8NET1 73 aa13.11□□□□□ -0.31
LINC00554-201ENST00000564841 OR2Z1Q8NG97 314 aa13.11□□□□□ -0.31
LINC00554-201ENST00000564841 C18orf15Q96N68 181 aa13.11□□□□□ -0.31
LINC00554-201ENST00000564841 TTTY13Q9BZ97 58 aa13.11□□□□□ -0.31
LINC00554-201ENST00000564841 SVEP1Q4LDE5 3571 aa13.11□□□□□ -0.31
LINC00554-201ENST00000564841 SRRM4A7MD48 611 aaKnown RBP13.1□□□□□ -0.31
LINC00554-201ENST00000564841 F2RL2O00254 374 aa13.1□□□□□ -0.31
LINC00554-201ENST00000564841 SLC25A5P05141 298 aaKnown RBP13.1□□□□□ -0.31
LINC00554-201ENST00000564841 DUX4L9Q6RFH8 374 aaPredicted RBP13.1□□□□□ -0.31
LINC00554-201ENST00000564841 Q6ZT83 130 aa13.1□□□□□ -0.31
LINC00554-201ENST00000564841 SCNM1Q9BWG6 230 aa13.1□□□□□ -0.31
LINC00554-201ENST00000564841 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.1□□□□□ -0.31
LINC00554-201ENST00000564841 LOC389332A0A1B0GUA5 103 aa13.1□□□□□ -0.31
LINC00554-201ENST00000564841 IGKV1-16P04430 117 aa13.1□□□□□ -0.31
LINC00554-201ENST00000564841 FAM90A1Q86YD7 464 aa13.1□□□□□ -0.31
LINC00554-201ENST00000564841 WFDC3Q8IUB2 231 aa13.1□□□□□ -0.31
LINC00554-201ENST00000564841 MTURNQ8N3F0 131 aa13.1□□□□□ -0.31
LINC00554-201ENST00000564841 VSTM2AQ8TAG5 236 aa13.1□□□□□ -0.31
LINC00554-201ENST00000564841 ZNF747Q9BV97 191 aa13.1□□□□□ -0.31
LINC00554-201ENST00000564841 A0A1W2PPM0 123 aa13.1□□□□□ -0.31
LINC00554-201ENST00000564841 PGPA6NDG6 321 aa13.1□□□□□ -0.31
LINC00554-201ENST00000564841 K7ERJ3 54 aa13.1□□□□□ -0.31
LINC00554-201ENST00000564841 ZNF788Q6ZQV5 615 aa13.1□□□□□ -0.31
LINC00554-201ENST00000564841 RPP21Q9H633 154 aaKnown RBP13.1□□□□□ -0.31
LINC00554-201ENST00000564841 DKK4Q9UBT3 224 aa13.1□□□□□ -0.31
LINC00554-201ENST00000564841 TSSC4Q9Y5U2 329 aaPredicted RBP13.1□□□□□ -0.31
LINC00554-201ENST00000564841 BMI1P35226 326 aa13.09□□□□□ -0.31
LINC00554-201ENST00000564841 IGFL2Q6UWQ7 119 aa13.09□□□□□ -0.31
LINC00554-201ENST00000564841 ABHD17AQ96GS6 310 aa13.09□□□□□ -0.31
LINC00554-201ENST00000564841 PSMB11A5LHX3 300 aa13.09□□□□□ -0.31
LINC00554-201ENST00000564841 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.09□□□□□ -0.31
LINC00554-201ENST00000564841 SAA2P0DJI9 122 aaPredicted RBP13.09□□□□□ -0.31
LINC00554-201ENST00000564841 PROCRQ9UNN8 238 aa13.09□□□□□ -0.31
LINC00554-201ENST00000564841 INSIG2Q9Y5U4 225 aa13.09□□□□□ -0.31
LINC00554-201ENST00000564841 FAM90A9PA6NNJ1 464 aa13.08□□□□□ -0.32
LINC00554-201ENST00000564841 E7EUB6 86 aa13.08□□□□□ -0.32
LINC00554-201ENST00000564841 FAM87AP0C7U9 286 aa13.08□□□□□ -0.32
LINC00554-201ENST00000564841 FCGR2BP31994 310 aaPredicted RBP13.08□□□□□ -0.32
LINC00554-201ENST00000564841 LOXL3P58215 753 aa13.08□□□□□ -0.32
LINC00554-201ENST00000564841 ATP5L2Q7Z4Y8 100 aa13.08□□□□□ -0.32
LINC00554-201ENST00000564841 ITLN1Q8WWA0 313 aa13.08□□□□□ -0.32
LINC00554-201ENST00000564841 DDB2Q92466 427 aa13.08□□□□□ -0.32
LINC00554-201ENST00000564841 HSPB8Q9UJY1 196 aa13.08□□□□□ -0.32
LINC00554-201ENST00000564841 AKAP6Q13023 2319 aa13.08□□□□□ -0.32
LINC00554-201ENST00000564841 A6NDN8 102 aa13.08□□□□□ -0.32
LINC00554-201ENST00000564841 COX7A2P2O60397 106 aa13.08□□□□□ -0.32
LINC00554-201ENST00000564841 P01737 135 aa13.08□□□□□ -0.32
LINC00554-201ENST00000564841 NMUP48645 174 aa13.08□□□□□ -0.32
LINC00554-201ENST00000564841 CT45A1Q5HYN5 189 aa13.08□□□□□ -0.32
LINC00554-201ENST00000564841 RUSC1-AS1Q66K80 236 aa13.08□□□□□ -0.32
LINC00554-201ENST00000564841 SEM1Q6ZVN7 128 aa13.08□□□□□ -0.32
LINC00554-201ENST00000564841 CT45A3Q8NHU0 189 aa13.08□□□□□ -0.32
LINC00554-201ENST00000564841 MRPL36Q9P0J6 103 aaKnown RBP13.08□□□□□ -0.32
LINC00554-201ENST00000564841 FOXA2Q9Y261 457 aaPredicted RBP13.08□□□□□ -0.32
LINC00554-201ENST00000564841 A8MWL6 223 aa13.07□□□□□ -0.32
LINC00554-201ENST00000564841 ADH4P08319 380 aa13.07□□□□□ -0.32
LINC00554-201ENST00000564841 CIARTQ8N365 385 aaPredicted RBP13.07□□□□□ -0.32
LINC00554-201ENST00000564841 RBMXL3Q8N7X1 1067 aaKnown RBP13.07□□□□□ -0.32
LINC00554-201ENST00000564841 FXYD5Q96DB9 178 aa13.07□□□□□ -0.32
LINC00554-201ENST00000564841 TPPP3Q9BW30 176 aa13.07□□□□□ -0.32
LINC00554-201ENST00000564841 PIEZO1Q92508 2521 aa13.07□□□□□ -0.32
LINC00554-201ENST00000564841 CECR9P0C854 216 aa13.07□□□□□ -0.32
LINC00554-201ENST00000564841 PRDX2P32119 198 aa13.07□□□□□ -0.32
LINC00554-201ENST00000564841 CEACAM3P40198 252 aa13.07□□□□□ -0.32
LINC00554-201ENST00000564841 MSMPQ1L6U9 139 aa13.07□□□□□ -0.32
LINC00554-201ENST00000564841 RND1Q92730 232 aa13.07□□□□□ -0.32
LINC00554-201ENST00000564841 AP5S1Q9NUS5 200 aa13.07□□□□□ -0.32
LINC00554-201ENST00000564841 EPDR1Q9UM22 224 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms