RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 TMED4Q7Z7H5 227 aa0.6□□□□□ -2.31
CHD9-211ENST00000564600 BPIFA4PQ86YQ2 179 aa0.6□□□□□ -2.31
CHD9-211ENST00000564600 OR2T10Q8NGZ9 312 aa0.6□□□□□ -2.31
CHD9-211ENST00000564600 SFT2D1Q8WV19 159 aa0.6□□□□□ -2.31
CHD9-211ENST00000564600 LYSMD1Q96S90 227 aa0.6□□□□□ -2.31
CHD9-211ENST00000564600 GINS4Q9BRT9 223 aa0.6□□□□□ -2.31
CHD9-211ENST00000564600 RTL8AQ9BWD3 113 aa0.6□□□□□ -2.31
CHD9-211ENST00000564600 LYRM2Q9NU23 88 aaPredicted RBP0.6□□□□□ -2.31
CHD9-211ENST00000564600 PRNDQ9UKY0 176 aa0.6□□□□□ -2.31
CHD9-211ENST00000564600 SNURFQ9Y675 71 aa0.6□□□□□ -2.31
CHD9-211ENST00000564600 FBN2P35556 2912 aa0.6□□□□□ -2.31
CHD9-211ENST00000564600 NUP98P52948 1817 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 UHRF1BP1Q6BDS2 1440 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 YTHDC2Q9H6S0 1430 aaKnown RBP0.59□□□□□ -2.31
CHD9-211ENST00000564600 PIAS1O75925 651 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 NDUFC2O95298 119 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 BRS3P32247 399 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 SSR2P43308 183 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 DSCR4P56555 118 aaPredicted RBP0.59□□□□□ -2.31
CHD9-211ENST00000564600 TCTAP57738 103 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 ROMO1P60602 79 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 EIF5AP63241 154 aaKnown RBP0.59□□□□□ -2.31
CHD9-211ENST00000564600 MYL5Q02045 173 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 BRMS1LQ5PSV4 323 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 AKR1C8PQ5T2L2 129 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 PHF5AQ7RTV0 110 aaKnown RBP0.59□□□□□ -2.31
CHD9-211ENST00000564600 STX12Q86Y82 276 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 C15orf53Q8NAA6 179 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 PPTC7Q8NI37 304 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 PLEKHB2Q96CS7 222 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 ZHX1-C8orf76Q96EF9 292 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 GPER1Q99527 375 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 MRPL57Q9BQC6 102 aaKnown RBP0.59□□□□□ -2.31
CHD9-211ENST00000564600 PRADC1Q9BSG0 188 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 C9orf16Q9BUW7 83 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 REG4Q9BYZ8 158 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 RASL12Q9NYN1 266 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 OPTCQ9UBM4 332 aa0.59□□□□□ -2.31
CHD9-211ENST00000564600 STAB1Q9NY15 2570 aa0.59□□□□□ -2.32
CHD9-211ENST00000564600 PIK3C2AO00443 1686 aa0.59□□□□□ -2.32
CHD9-211ENST00000564600 MYLKQ15746 1914 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 MIA2Q96PC5 1412 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 TRAV14DV4A0A0A6YYC5 116 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 E5RI56 91 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 E7EUB6 86 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 TAX1BP3O14907 124 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 IFNA1P01562 189 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 UBBP0CG47 229 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 HLA-EP13747 358 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 SRP14P37108 136 aaKnown RBP0.58□□□□□ -2.32
CHD9-211ENST00000564600 PPP1R2P41236 205 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 RHOBP62745 196 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 DYNLT1P63172 113 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 CDK5R1Q15078 307 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 DCUN1D2Q6PH85 259 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 PATE2Q6UY27 113 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 SOSTDC1Q6X4U4 206 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 GRINAQ7Z429 371 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 Q8IYB0 196 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 PATE1Q8WXA2 126 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 DNAJC9Q8WXX5 260 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 MALSU1Q96EH3 234 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 SELENOSQ9BQE4 189 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 GINS3Q9BRX5 216 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 BCL2L10Q9HD36 194 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 ENY2Q9NPA8 101 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 FAM32AQ9Y421 112 aaKnown RBP0.58□□□□□ -2.32
CHD9-211ENST00000564600 POLEQ07864 2286 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 CEP192Q8TEP8 1941 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 MYH2Q9UKX2 1941 aa0.58□□□□□ -2.32
CHD9-211ENST00000564600 MYH10P35580 1976 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 TEP1Q99973 2627 aaKnown RBP0.57□□□□□ -2.32
CHD9-211ENST00000564600 NCOR1O75376 2440 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 CAMSAP2Q08AD1 1489 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 TRAV1-1A0A0B4J248 108 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 DUXBA0A1W2PPF3 345 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 GEMIN2O14893 280 aaKnown RBP0.57□□□□□ -2.32
CHD9-211ENST00000564600 ATG12O94817 140 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 IFNA14P01570 189 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 IFNA4P05014 189 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 SMIM17P0DL12 118 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 S100A5P33763 92 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 NDUFA6P56556 154 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 NCALDP61601 193 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 UBE2BP63146 152 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 RPL19P84098 196 aaKnown RBP0.57□□□□□ -2.32
CHD9-211ENST00000564600 TAF1AQ15573 450 aaPredicted RBP0.57□□□□□ -2.32
CHD9-211ENST00000564600 BCL2L15Q5TBC7 163 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 ZNF833PQ6ZTB9 187 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 OR13C6PQ8NH95 151 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 NEK7Q8TDX7 302 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 AP3S1Q92572 193 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 PBDC1Q9BVG4 233 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 CCDC94Q9BW85 323 aaPredicted RBP0.57□□□□□ -2.32
CHD9-211ENST00000564600 C6orf62Q9GZU0 229 aaPredicted RBP0.57□□□□□ -2.32
CHD9-211ENST00000564600 ACER3Q9NUN7 267 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 SMPXQ9UHP9 88 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 ATPIF1Q9UII2 106 aa0.57□□□□□ -2.32
CHD9-211ENST00000564600 ANKRD17O75179 2603 aaKnown RBP0.57□□□□□ -2.32
CHD9-211ENST00000564600 DOCK4Q8N1I0 1966 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms