RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 AQP4P55087 323 aa1.43□□□□□ -2.18
UBR1-205ENST00000564540 DYNLT1P63172 113 aa1.43□□□□□ -2.18
UBR1-205ENST00000564540 ERHP84090 104 aaKnown RBP1.43□□□□□ -2.18
UBR1-205ENST00000564540 SLC38A11Q08AI6 406 aa1.43□□□□□ -2.18
UBR1-205ENST00000564540 EIF3IQ13347 325 aaKnown RBP1.43□□□□□ -2.18
UBR1-205ENST00000564540 NNATQ16517 81 aa1.43□□□□□ -2.18
UBR1-205ENST00000564540 TMEM229BQ8NBD8 167 aa1.43□□□□□ -2.18
UBR1-205ENST00000564540 OR4X2Q8NGF9 303 aa1.43□□□□□ -2.18
UBR1-205ENST00000564540 OR4D11Q8NGI4 311 aa1.43□□□□□ -2.18
UBR1-205ENST00000564540 OR2T10Q8NGZ9 312 aa1.43□□□□□ -2.18
UBR1-205ENST00000564540 MRPS24Q96EL2 167 aaKnown RBP1.43□□□□□ -2.18
UBR1-205ENST00000564540 NPCDR1Q9BY65 106 aa1.43□□□□□ -2.18
UBR1-205ENST00000564540 FAM107BQ9H098 131 aa1.43□□□□□ -2.18
UBR1-205ENST00000564540 POPDC3Q9HBV1 291 aa1.43□□□□□ -2.18
UBR1-205ENST00000564540 NAT8BQ9UHF3 227 aa1.43□□□□□ -2.18
UBR1-205ENST00000564540 ARHGEF28Q8N1W1 1705 aaKnown RBP1.43□□□□□ -2.18
UBR1-205ENST00000564540 OBSL1O75147 1896 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 RIMBP3CA6NJZ7 1639 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 RIMBP3BA6NNM3 1639 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 RIMBP3Q9UFD9 1639 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 IGKV1D-42A0A075B6H8 117 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 TRAV36DV7A0A075B6V5 113 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 TRGV10A0A0A0MS01 117 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 A0A0G2JQZ4 141 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 A0A1B0GX51 115 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 C7orf71A4D174 169 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 HMSDA8MTL9 139 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 IBA57-AS1B1ANH7 110 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 FNDC10F2Z333 226 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 K7ERJ3 54 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 NDUFB3O43676 98 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 PGLYRP1O75594 196 aaPredicted RBP1.42□□□□□ -2.18
UBR1-205ENST00000564540 COX6A1P12074 109 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 HLA-EP13747 358 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 PEBP1P30086 187 aaKnown RBP1.42□□□□□ -2.18
UBR1-205ENST00000564540 AKR1C3P42330 323 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 HINT1P49773 126 aaPredicted RBP1.42□□□□□ -2.18
UBR1-205ENST00000564540 GTF2A1P52655 376 aaPredicted RBP1.42□□□□□ -2.18
UBR1-205ENST00000564540 CKS1BP61024 79 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 TPRXLQ17RH7 258 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 DEFB115Q30KQ5 88 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 PHF5AQ7RTV0 110 aaKnown RBP1.42□□□□□ -2.18
UBR1-205ENST00000564540 CROCCP2Q86T23 111 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 C9orf163Q8N9P6 203 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 WFDC11Q8NEX6 87 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 OR4E2Q8NGC2 313 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 LZICQ8WZA0 190 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 ADAT1Q9BUB4 502 aaKnown RBP1.42□□□□□ -2.18
UBR1-205ENST00000564540 TMEM138Q9NPI0 162 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 TMEM106BQ9NUM4 274 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 CEP152O94986 1710 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 CEP164Q9UPV0 1460 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 UBR2Q8IWV8 1755 aa1.42□□□□□ -2.18
UBR1-205ENST00000564540 ZNF705FA8MVS1 300 aaPredicted RBP1.41□□□□□ -2.18
UBR1-205ENST00000564540 M0QZK8 103 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 LYZL6O75951 148 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 CST7O76096 145 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 NAPSAO96009 420 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 METTL15P1P0C7V9 234 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 TMEM258P61165 79 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 HBBP68871 147 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 PSG9Q00887 426 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 ZNF345Q14585 488 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 BRMS1LQ5PSV4 323 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 EIF5AL1Q6IS14 154 aaKnown RBP1.41□□□□□ -2.18
UBR1-205ENST00000564540 PATE2Q6UY27 113 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 Q6ZTI0 123 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 AAED1Q7RTV5 226 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 DEFB128Q7Z7B8 93 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 LRRC28Q86X40 367 aaPredicted RBP1.41□□□□□ -2.18
UBR1-205ENST00000564540 IFT20Q8IY31 132 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 SLC30A7Q8NEW0 376 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 OR8B3Q8NGG8 313 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 ZNF418Q8TF45 676 aaPredicted RBP1.41□□□□□ -2.18
UBR1-205ENST00000564540 OR2H1Q9GZK4 316 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 BCL2L10Q9HD36 194 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 CAMSAP2Q08AD1 1489 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 ADGBQ8N7X0 1667 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 NUP210LQ5VU65 1888 aa1.41□□□□□ -2.18
UBR1-205ENST00000564540 RIC1Q4ADV7 1423 aa1.4□□□□□ -2.18
UBR1-205ENST00000564540 TRAV3A0A0B4J244 114 aa1.4□□□□□ -2.19
UBR1-205ENST00000564540 A0A1B0GW64 132 aa1.4□□□□□ -2.19
UBR1-205ENST00000564540 TMEM189A5PLL7 270 aa1.4□□□□□ -2.19
UBR1-205ENST00000564540 J3QQQ9 107 aa1.4□□□□□ -2.19
UBR1-205ENST00000564540 TNFSF15O95150 251 aa1.4□□□□□ -2.19
UBR1-205ENST00000564540 PMP2P02689 132 aa1.4□□□□□ -2.19
UBR1-205ENST00000564540 FABP2P12104 132 aa1.4□□□□□ -2.19
UBR1-205ENST00000564540 SDC4P31431 198 aa1.4□□□□□ -2.19
UBR1-205ENST00000564540 RPL26P61254 145 aaKnown RBP1.4□□□□□ -2.19
UBR1-205ENST00000564540 NDUFA5Q16718 116 aa1.4□□□□□ -2.19
UBR1-205ENST00000564540 SMIM21Q3B7S5 101 aa1.4□□□□□ -2.19
UBR1-205ENST00000564540 CCDC153Q494R4 210 aa1.4□□□□□ -2.19
UBR1-205ENST00000564540 Q5XG85 94 aa1.4□□□□□ -2.19
UBR1-205ENST00000564540 Q8IYB0 196 aa1.4□□□□□ -2.19
UBR1-205ENST00000564540 TCEAL4Q96EI5 215 aa1.4□□□□□ -2.19
UBR1-205ENST00000564540 TIMM21Q9BVV7 248 aa1.4□□□□□ -2.19
UBR1-205ENST00000564540 CACYBPQ9HB71 228 aaKnown RBP1.4□□□□□ -2.19
UBR1-205ENST00000564540 TAF9BQ9HBM6 251 aa1.4□□□□□ -2.19
UBR1-205ENST00000564540 SPANXCQ9NY87 97 aa1.4□□□□□ -2.19
UBR1-205ENST00000564540 RPL26L1Q9UNX3 145 aaKnown RBP1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms