RNA–Protein interactions for RNA: ENST00000564399.1

VPS4A-203, Transcript of vacuolar protein sorting 4 homolog A, humanhuman

TSL 5

Gene VPS4A, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4A-203ENST00000564399 OR10J6PQ8NGY7 276 aa5.05□□□□□ -1.6
VPS4A-203ENST00000564399 ZNF503Q96F45 646 aa5.05□□□□□ -1.6
VPS4A-203ENST00000564399 C20orf173Q96LM9 149 aa5.05□□□□□ -1.6
VPS4A-203ENST00000564399 TP53RKQ96S44 253 aa5.05□□□□□ -1.6
VPS4A-203ENST00000564399 TIMM8BQ9Y5J9 83 aaPredicted RBP5.05□□□□□ -1.6
VPS4A-203ENST00000564399 TRAV12-2A0A075B6T6 113 aa5.04□□□□□ -1.6
VPS4A-203ENST00000564399 A0A0G2JRQ6 117 aa5.04□□□□□ -1.6
VPS4A-203ENST00000564399 LOC100506127A0A0U1RQW1 187 aa5.04□□□□□ -1.6
VPS4A-203ENST00000564399 C3orf85A0A1B0GTC6 90 aa5.04□□□□□ -1.6
VPS4A-203ENST00000564399 PLAC8L1A1L4L8 177 aa5.04□□□□□ -1.6
VPS4A-203ENST00000564399 ZFP92A6NM28 416 aa5.04□□□□□ -1.6
VPS4A-203ENST00000564399 CRXO43186 299 aaPredicted RBP5.04□□□□□ -1.6
VPS4A-203ENST00000564399 DUSP14O95147 198 aaKnown RBP5.04□□□□□ -1.6
VPS4A-203ENST00000564399 ZNF182P17025 639 aaPredicted RBP5.04□□□□□ -1.6
VPS4A-203ENST00000564399 ELK1P19419 428 aa5.04□□□□□ -1.6
VPS4A-203ENST00000564399 M6PRP20645 277 aa5.04□□□□□ -1.6
VPS4A-203ENST00000564399 RCVRNP35243 200 aa5.04□□□□□ -1.6
VPS4A-203ENST00000564399 MEOX2P50222 304 aa5.04□□□□□ -1.6
VPS4A-203ENST00000564399 CNN1P51911 297 aaKnown RBP5.04□□□□□ -1.6
VPS4A-203ENST00000564399 PIGPP57054 158 aa5.04□□□□□ -1.6
VPS4A-203ENST00000564399 LYZP61626 148 aa5.04□□□□□ -1.6
VPS4A-203ENST00000564399 SP6Q3SY56 376 aa5.04□□□□□ -1.6
VPS4A-203ENST00000564399 SERTAD4-AS1Q5TG53 156 aa5.04□□□□□ -1.6
VPS4A-203ENST00000564399 SAMD13Q5VXD3 122 aa5.04□□□□□ -1.6
VPS4A-203ENST00000564399 Q6ZRN7 208 aaPredicted RBP5.04□□□□□ -1.6
VPS4A-203ENST00000564399 NOXA1Q86UR1 476 aa5.04□□□□□ -1.6
VPS4A-203ENST00000564399 OR11H7Q8NGC8 314 aa5.04□□□□□ -1.6
VPS4A-203ENST00000564399 C16orf74Q96GX8 76 aa5.04□□□□□ -1.6
VPS4A-203ENST00000564399 NOP10Q9NPE3 64 aaKnown RBP5.04□□□□□ -1.6
VPS4A-203ENST00000564399 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.04□□□□□ -1.6
VPS4A-203ENST00000564399 PPP1R14DQ9NXH3 145 aa5.04□□□□□ -1.6
VPS4A-203ENST00000564399 VPS13BQ7Z7G8 4022 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 A8MTW9 85 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 ZNF701M0R085 212 aaPredicted RBP5.03□□□□□ -1.6
VPS4A-203ENST00000564399 SIVA1O15304 175 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 ADAP1O75689 374 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 DNAH10OSP0CZ25 163 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 GCSHP23434 173 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 UCP1P25874 307 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 GALR1P47211 349 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 TAS2R60P59551 318 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 RND3P61587 244 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 RHOBP62745 196 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 OR2F1Q13607 317 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 KLF9Q13886 244 aaPredicted RBP5.03□□□□□ -1.6
VPS4A-203ENST00000564399 UBE2NLQ5JXB2 153 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 TMEM144Q7Z5S9 345 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 TMEM256Q8N2U0 113 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 SAMD12Q8N8I0 201 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 OR52E5Q8NH55 327 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 ZNF486Q96H40 463 aaPredicted RBP5.03□□□□□ -1.6
VPS4A-203ENST00000564399 CNBD2Q96M20 576 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 RSG1Q9BU20 258 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 SLC25A39Q9BZJ4 359 aaPredicted RBP5.03□□□□□ -1.6
VPS4A-203ENST00000564399 COPZ2Q9P299 210 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 TNFRSF18Q9Y5U5 241 aa5.03□□□□□ -1.6
VPS4A-203ENST00000564399 A0A087WTM6 91 aa5.02□□□□□ -1.61
VPS4A-203ENST00000564399 SNRPGP15A8MWD9 76 aa5.02□□□□□ -1.61
VPS4A-203ENST00000564399 BOLA2-SMG1P6H3BVE0 249 aa5.02□□□□□ -1.61
VPS4A-203ENST00000564399 FABP1P07148 127 aa5.02□□□□□ -1.61
VPS4A-203ENST00000564399 ZNF90Q03938 601 aa5.02□□□□□ -1.61
VPS4A-203ENST00000564399 FGL1Q08830 312 aa5.02□□□□□ -1.61
VPS4A-203ENST00000564399 GAMTQ14353 236 aa5.02□□□□□ -1.61
VPS4A-203ENST00000564399 IGFL4Q6B9Z1 124 aa5.02□□□□□ -1.61
VPS4A-203ENST00000564399 ZNF493Q6ZR52 646 aa5.02□□□□□ -1.61
VPS4A-203ENST00000564399 FAM219AQ8IW50 185 aa5.02□□□□□ -1.61
VPS4A-203ENST00000564399 GPX8Q8TED1 209 aa5.02□□□□□ -1.61
VPS4A-203ENST00000564399 TMEM170AQ8WVE7 144 aa5.02□□□□□ -1.61
VPS4A-203ENST00000564399 SLC25A22Q9H936 323 aa5.02□□□□□ -1.61
VPS4A-203ENST00000564399 CACNG5Q9UF02 275 aa5.02□□□□□ -1.61
VPS4A-203ENST00000564399 GAGE12BA1L429 117 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 KRTAP29-1A8MX34 341 aaPredicted RBP5.01□□□□□ -1.61
VPS4A-203ENST00000564399 H3BNG1 76 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 GABARAPH6UMI1 98 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 TMEM127O75204 238 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 GAGE7O76087 117 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 GABARAPO95166 117 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 RLN2P04090 185 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 GAGE12FP0CL80 117 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 GAGE12GP0CL81 117 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 GAGE12IP0CL82 117 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 HOXA5P20719 270 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 HIST1H1AQ02539 215 aaPredicted RBP5.01□□□□□ -1.61
VPS4A-203ENST00000564399 NMSQ5H8A3 153 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 NFE4Q86UQ8 179 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 SNX29P2Q8IUI4 249 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 ARRDC1Q8N5I2 433 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 RNF182Q8N6D2 247 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 CCDC71LQ8N9Z2 235 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 ZNF738Q8NE65 137 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 TMEM263Q8WUH6 116 aaKnown RBP5.01□□□□□ -1.61
VPS4A-203ENST00000564399 NRG4Q8WWG1 115 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 SLC35E1Q96K37 410 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 SLC25A32Q9H2D1 315 aa5.01□□□□□ -1.61
VPS4A-203ENST00000564399 IGKV1D-37A0A075B6S9 117 aa5□□□□□ -1.61
VPS4A-203ENST00000564399 SMIM31A0A1B0GVY4 71 aa5□□□□□ -1.61
VPS4A-203ENST00000564399 ZNF98A6NK75 572 aa5□□□□□ -1.61
VPS4A-203ENST00000564399 NXPH4O95158 308 aa5□□□□□ -1.61
VPS4A-203ENST00000564399 PLA2G1BP04054 148 aaKnown RBP5□□□□□ -1.61
VPS4A-203ENST00000564399 GABARAPL2P60520 117 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms