RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 PBDC1Q9BVG4 233 aa12.52□□□□□ -0.41
RNF40-206ENST00000564260 HSPB11Q9Y547 144 aa12.52□□□□□ -0.41
RNF40-206ENST00000564260 HYPMO75409 117 aa12.51□□□□□ -0.41
RNF40-206ENST00000564260 APOHP02749 345 aaPredicted RBP12.51□□□□□ -0.41
RNF40-206ENST00000564260 LINC00869P0C866 280 aa12.51□□□□□ -0.41
RNF40-206ENST00000564260 RPL29P47914 159 aaKnown RBP12.51□□□□□ -0.41
RNF40-206ENST00000564260 CAMLGP49069 296 aa12.51□□□□□ -0.41
RNF40-206ENST00000564260 OR2F1Q13607 317 aa12.51□□□□□ -0.41
RNF40-206ENST00000564260 PARD6GQ9BYG4 376 aaPredicted RBP12.51□□□□□ -0.41
RNF40-206ENST00000564260 NHLH2Q02577 135 aa12.5□□□□□ -0.41
RNF40-206ENST00000564260 SIGLEC15Q6ZMC9 328 aa12.5□□□□□ -0.41
RNF40-206ENST00000564260 Q6ZRG5 221 aa12.5□□□□□ -0.41
RNF40-206ENST00000564260 STPG3Q8N7X2 389 aa12.5□□□□□ -0.41
RNF40-206ENST00000564260 AQP10Q96PS8 301 aa12.5□□□□□ -0.41
RNF40-206ENST00000564260 PFDN5Q99471 154 aa12.5□□□□□ -0.41
RNF40-206ENST00000564260 MGST2Q99735 147 aa12.5□□□□□ -0.41
RNF40-206ENST00000564260 ATP5SQ99766 215 aa12.5□□□□□ -0.41
RNF40-206ENST00000564260 B9D2Q9BPU9 175 aa12.5□□□□□ -0.41
RNF40-206ENST00000564260 IGHV3-49A0A0A0MS15 119 aa12.49□□□□□ -0.41
RNF40-206ENST00000564260 UBE2L5PA0A1B0GUS4 154 aa12.49□□□□□ -0.41
RNF40-206ENST00000564260 PRR20EP86478 221 aa12.49□□□□□ -0.41
RNF40-206ENST00000564260 PRR20CP86479 221 aa12.49□□□□□ -0.41
RNF40-206ENST00000564260 PRR20DP86480 221 aa12.49□□□□□ -0.41
RNF40-206ENST00000564260 PRR20BP86481 221 aa12.49□□□□□ -0.41
RNF40-206ENST00000564260 PRR20AP86496 221 aa12.49□□□□□ -0.41
RNF40-206ENST00000564260 DEFB121Q5J5C9 76 aa12.49□□□□□ -0.41
RNF40-206ENST00000564260 OR1L4Q8NGR5 311 aa12.49□□□□□ -0.41
RNF40-206ENST00000564260 OR2T35Q8NGX2 323 aa12.49□□□□□ -0.41
RNF40-206ENST00000564260 PPP1R14BQ96C90 147 aa12.49□□□□□ -0.41
RNF40-206ENST00000564260 GGTLC1Q9BX51 225 aa12.49□□□□□ -0.41
RNF40-206ENST00000564260 MS4A6AQ9H2W1 248 aa12.49□□□□□ -0.41
RNF40-206ENST00000564260 HIGD1AQ9Y241 93 aa12.49□□□□□ -0.41
RNF40-206ENST00000564260 PRKDCP78527 4128 aaKnown RBP12.48□□□□□ -0.41
RNF40-206ENST00000564260 IGHV3OR16-13A0A075B7E8 117 aa12.48□□□□□ -0.41
RNF40-206ENST00000564260 IGHV3-74A0A0B4J1X5 117 aa12.48□□□□□ -0.41
RNF40-206ENST00000564260 OR11H12B2RN74 326 aa12.48□□□□□ -0.41
RNF40-206ENST00000564260 DNASE2O00115 360 aaPredicted RBP12.48□□□□□ -0.41
RNF40-206ENST00000564260 IGHV4-30-4P0DP06 118 aa12.48□□□□□ -0.41
RNF40-206ENST00000564260 ORM2P19652 201 aa12.48□□□□□ -0.41
RNF40-206ENST00000564260 MEOX2P50222 304 aa12.48□□□□□ -0.41
RNF40-206ENST00000564260 RPL11P62913 178 aaKnown RBP12.48□□□□□ -0.41
RNF40-206ENST00000564260 OPCMLQ14982 345 aa12.48□□□□□ -0.41
RNF40-206ENST00000564260 INO80EQ8NBZ0 244 aaPredicted RBP12.48□□□□□ -0.41
RNF40-206ENST00000564260 OR1B1Q8NGR6 318 aa12.48□□□□□ -0.41
RNF40-206ENST00000564260 NPCDR1Q9BY65 106 aa12.48□□□□□ -0.41
RNF40-206ENST00000564260 NRN1Q9NPD7 142 aa12.48□□□□□ -0.41
RNF40-206ENST00000564260 C19orf73Q9NVV2 129 aa12.48□□□□□ -0.41
RNF40-206ENST00000564260 ZNF98A6NK75 572 aa12.47□□□□□ -0.41
RNF40-206ENST00000564260 C17orf112F2Z3M2 114 aa12.47□□□□□ -0.41
RNF40-206ENST00000564260 IFNA5P01569 189 aa12.47□□□□□ -0.41
RNF40-206ENST00000564260 CD7P09564 240 aa12.47□□□□□ -0.41
RNF40-206ENST00000564260 NHLRC4P0CG21 123 aaPredicted RBP12.47□□□□□ -0.41
RNF40-206ENST00000564260 RPL7P18124 248 aaKnown RBP12.47□□□□□ -0.41
RNF40-206ENST00000564260 FGF7P21781 194 aa12.47□□□□□ -0.41
RNF40-206ENST00000564260 GALR1P47211 349 aa12.47□□□□□ -0.41
RNF40-206ENST00000564260 ZNF266Q14584 549 aa12.47□□□□□ -0.41
RNF40-206ENST00000564260 TMEM182Q6ZP80 229 aaPredicted RBP12.47□□□□□ -0.41
RNF40-206ENST00000564260 OR8I2Q8N0Y5 310 aa12.47□□□□□ -0.41
RNF40-206ENST00000564260 ZNF709Q8N972 641 aa12.47□□□□□ -0.41
RNF40-206ENST00000564260 DCANP1Q8TF63 244 aa12.47□□□□□ -0.41
RNF40-206ENST00000564260 SHANK2-AS3Q9BTD1 123 aa12.47□□□□□ -0.41
RNF40-206ENST00000564260 SLC25A39Q9BZJ4 359 aaPredicted RBP12.47□□□□□ -0.41
RNF40-206ENST00000564260 WDR61Q9GZS3 305 aaKnown RBP12.47□□□□□ -0.41
RNF40-206ENST00000564260 ARL6Q9H0F7 186 aa12.47□□□□□ -0.41
RNF40-206ENST00000564260 IGHV3-66A0A0C4DH42 116 aa12.46□□□□□ -0.41
RNF40-206ENST00000564260 H3BRN7 92 aa12.46□□□□□ -0.41
RNF40-206ENST00000564260 K7EQG2 157 aa12.46□□□□□ -0.41
RNF40-206ENST00000564260 GATA2P23769 480 aaPredicted RBP12.46□□□□□ -0.41
RNF40-206ENST00000564260 B2MP61769 119 aa12.46□□□□□ -0.41
RNF40-206ENST00000564260 CLINT1Q14677 625 aa12.46□□□□□ -0.41
RNF40-206ENST00000564260 GATAD1Q8WUU5 269 aa12.46□□□□□ -0.41
RNF40-206ENST00000564260 ARV1Q9H2C2 271 aa12.46□□□□□ -0.41
RNF40-206ENST00000564260 TUBA4BQ9H853 241 aa12.46□□□□□ -0.41
RNF40-206ENST00000564260 DNAJC4Q9NNZ3 241 aa12.46□□□□□ -0.41
RNF40-206ENST00000564260 COX7A2P2O60397 106 aa12.45□□□□□ -0.42
RNF40-206ENST00000564260 OR5G3P0C626 314 aa12.45□□□□□ -0.42
RNF40-206ENST00000564260 SNRPD3P62318 126 aaKnown RBP12.45□□□□□ -0.42
RNF40-206ENST00000564260 Q6ZNX1 250 aa12.45□□□□□ -0.42
RNF40-206ENST00000564260 SCGB1C1Q8TD33 95 aa12.45□□□□□ -0.42
RNF40-206ENST00000564260 SLC39A9Q9NUM3 307 aa12.45□□□□□ -0.42
RNF40-206ENST00000564260 FRMD6-AS1P0C7T7 363 aa12.44□□□□□ -0.42
RNF40-206ENST00000564260 ODF3L2Q3SX64 289 aa12.44□□□□□ -0.42
RNF40-206ENST00000564260 C10orf113Q5VZT2 155 aa12.44□□□□□ -0.42
RNF40-206ENST00000564260 STXBP6Q8NFX7 210 aa12.44□□□□□ -0.42
RNF40-206ENST00000564260 TNFSF18Q9UNG2 199 aa12.44□□□□□ -0.42
RNF40-206ENST00000564260 PXMP4Q9Y6I8 212 aa12.44□□□□□ -0.42
RNF40-206ENST00000564260 LINC00322Q6ZN03 302 aaPredicted RBP12.43□□□□□ -0.42
RNF40-206ENST00000564260 LINC00305Q7Z4B0 112 aa12.43□□□□□ -0.42
RNF40-206ENST00000564260 TIMM9Q9Y5J7 89 aa12.43□□□□□ -0.42
RNF40-206ENST00000564260 ISLRO14498 428 aa12.42□□□□□ -0.42
RNF40-206ENST00000564260 TAAR5O14804 337 aa12.42□□□□□ -0.42
RNF40-206ENST00000564260 CXCL2P19875 107 aa12.42□□□□□ -0.42
RNF40-206ENST00000564260 ID1P41134 155 aa12.42□□□□□ -0.42
RNF40-206ENST00000564260 PSMB3P49720 205 aa12.42□□□□□ -0.42
RNF40-206ENST00000564260 MIC13Q5XKP0 118 aa12.42□□□□□ -0.42
RNF40-206ENST00000564260 PATE2Q6UY27 113 aa12.42□□□□□ -0.42
RNF40-206ENST00000564260 BPIFA4PQ86YQ2 179 aa12.42□□□□□ -0.42
RNF40-206ENST00000564260 GBGT1Q8N5D6 347 aa12.42□□□□□ -0.42
RNF40-206ENST00000564260 TMEM37Q8WXS4 190 aa12.42□□□□□ -0.42
RNF40-206ENST00000564260 SLC25A32Q9H2D1 315 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 183.3 ms