RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 RNF125Q96EQ8 232 aa7.57□□□□□ -1.2
UBFD1-202ENST00000563366 UHRF2Q96PU4 802 aa7.57□□□□□ -1.2
UBFD1-202ENST00000563366 RARRES2Q99969 163 aa7.57□□□□□ -1.2
UBFD1-202ENST00000563366 TCEAL7Q9BRU2 100 aa7.57□□□□□ -1.2
UBFD1-202ENST00000563366 NIPSNAP3BQ9BS92 247 aa7.57□□□□□ -1.2
UBFD1-202ENST00000563366 SH2D7A6NKC9 451 aaPredicted RBP7.56□□□□□ -1.2
UBFD1-202ENST00000563366 C11orf94C9JXX5 98 aa7.56□□□□□ -1.2
UBFD1-202ENST00000563366 BMPR1BO00238 502 aa7.56□□□□□ -1.2
UBFD1-202ENST00000563366 HOXA3O43365 443 aaPredicted RBP7.56□□□□□ -1.2
UBFD1-202ENST00000563366 PAGE4O60829 102 aa7.56□□□□□ -1.2
UBFD1-202ENST00000563366 TRGV3P03979 118 aa7.56□□□□□ -1.2
UBFD1-202ENST00000563366 IL4P05112 153 aa7.56□□□□□ -1.2
UBFD1-202ENST00000563366 ADCYAP1P18509 176 aa7.56□□□□□ -1.2
UBFD1-202ENST00000563366 PPIFP30405 207 aaKnown RBP7.56□□□□□ -1.2
UBFD1-202ENST00000563366 RAB9AP51151 201 aa7.56□□□□□ -1.2
UBFD1-202ENST00000563366 TPPP2P59282 170 aa7.56□□□□□ -1.2
UBFD1-202ENST00000563366 RPL15P61313 204 aaKnown RBP7.56□□□□□ -1.2
UBFD1-202ENST00000563366 LYZP61626 148 aa7.56□□□□□ -1.2
UBFD1-202ENST00000563366 UBE2L3P68036 154 aaKnown RBP7.56□□□□□ -1.2
UBFD1-202ENST00000563366 SLC35B1P78383 322 aa7.56□□□□□ -1.2
UBFD1-202ENST00000563366 PNRC1Q12796 327 aaPredicted RBP7.56□□□□□ -1.2
UBFD1-202ENST00000563366 CT83Q5H943 113 aa7.56□□□□□ -1.2
UBFD1-202ENST00000563366 ZNF600Q6ZNG1 722 aa7.56□□□□□ -1.2
UBFD1-202ENST00000563366 CYB561D1Q8N8Q1 229 aa7.56□□□□□ -1.2
UBFD1-202ENST00000563366 OR5AU1Q8NGC0 362 aa7.56□□□□□ -1.2
UBFD1-202ENST00000563366 TMPRSS5Q9H3S3 457 aa7.56□□□□□ -1.2
UBFD1-202ENST00000563366 DOK5Q9P104 306 aa7.56□□□□□ -1.2
UBFD1-202ENST00000563366 SOX21Q9Y651 276 aaPredicted RBP7.56□□□□□ -1.2
UBFD1-202ENST00000563366 NBPF19A0A087WUL8 3843 aa7.55□□□□□ -1.2
UBFD1-202ENST00000563366 A0A1W2PRE2 83 aa7.55□□□□□ -1.2
UBFD1-202ENST00000563366 WI2-2373I1.2A0A1W2PRP0 233 aa7.55□□□□□ -1.2
UBFD1-202ENST00000563366 OR2T8A6NH00 312 aa7.55□□□□□ -1.2
UBFD1-202ENST00000563366 LINC01548A6NM66 108 aa7.55□□□□□ -1.2
UBFD1-202ENST00000563366 CTSGP08311 255 aa7.55□□□□□ -1.2
UBFD1-202ENST00000563366 BLCAPP62952 87 aa7.55□□□□□ -1.2
UBFD1-202ENST00000563366 SPATA31B1PQ5VZV4 182 aa7.55□□□□□ -1.2
UBFD1-202ENST00000563366 CST9LP1Q5W188 147 aa7.55□□□□□ -1.2
UBFD1-202ENST00000563366 PATE2Q6UY27 113 aa7.55□□□□□ -1.2
UBFD1-202ENST00000563366 ZNF491Q8N8L2 437 aa7.55□□□□□ -1.2
UBFD1-202ENST00000563366 OR4F5Q8NH21 305 aa7.55□□□□□ -1.2
UBFD1-202ENST00000563366 OR4F4Q96R69 305 aa7.55□□□□□ -1.2
UBFD1-202ENST00000563366 PAXXQ9BUH6 204 aa7.55□□□□□ -1.2
UBFD1-202ENST00000563366 SLC25A2Q9BXI2 301 aa7.55□□□□□ -1.2
UBFD1-202ENST00000563366 OR51M1Q9H341 326 aa7.55□□□□□ -1.2
UBFD1-202ENST00000563366 YAE1D1Q9NRH1 226 aa7.55□□□□□ -1.2
UBFD1-202ENST00000563366 MRPL27Q9P0M9 148 aaKnown RBP7.55□□□□□ -1.2
UBFD1-202ENST00000563366 FLNAP21333 2647 aaKnown RBP7.55□□□□□ -1.2
UBFD1-202ENST00000563366 ITPR2Q14571 2701 aa7.55□□□□□ -1.2
UBFD1-202ENST00000563366 CSPG4Q6UVK1 2322 aa7.55□□□□□ -1.2
UBFD1-202ENST00000563366 CELSR1Q9NYQ6 3014 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 TEX15Q9BXT5 2789 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 ZANQ9Y493 2812 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 FAM74A7A6NL05 159 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 C9JQL5 133 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 TGOLN2O43493 480 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 IGHG4P01861 327 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 PF4V1P10720 104 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 GPR183P32249 361 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 CEBPGP53567 150 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 CD81P60033 236 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 CFHR3Q02985 330 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 KRTAP1-1Q07627 177 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 RHEBQ15382 184 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 BPIFA4PQ86YQ2 179 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 SIGLECL1Q8N7X8 197 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 LINC00482Q8N8I6 264 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 RPUSD4Q96CM3 377 aaKnown RBP7.54□□□□□ -1.2
UBFD1-202ENST00000563366 FAM167A-AS1Q96KT0 104 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 MS4A10Q96PG2 267 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 SHANK2-AS3Q9BTD1 123 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 SLC25A39Q9BZJ4 359 aaPredicted RBP7.54□□□□□ -1.2
UBFD1-202ENST00000563366 TMEM14CQ9P0S9 112 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 RABAC1Q9UI14 185 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 PRELID1Q9Y255 219 aa7.54□□□□□ -1.2
UBFD1-202ENST00000563366 ZNF727A8MUV8 499 aa7.53□□□□□ -1.2
UBFD1-202ENST00000563366 B4DEV8 164 aa7.53□□□□□ -1.2
UBFD1-202ENST00000563366 H3BRN7 92 aa7.53□□□□□ -1.2
UBFD1-202ENST00000563366 CLDN34H7C241 214 aa7.53□□□□□ -1.2
UBFD1-202ENST00000563366 CLEC3BP05452 202 aa7.53□□□□□ -1.2
UBFD1-202ENST00000563366 UBE2G2P60604 165 aa7.53□□□□□ -1.2
UBFD1-202ENST00000563366 GUCA2BQ16661 112 aa7.53□□□□□ -1.2
UBFD1-202ENST00000563366 FAM90A2PQ658T7 463 aa7.53□□□□□ -1.2
UBFD1-202ENST00000563366 OR4F17Q8NGA8 305 aa7.53□□□□□ -1.2
UBFD1-202ENST00000563366 TVP23CQ96ET8 276 aa7.53□□□□□ -1.2
UBFD1-202ENST00000563366 RAX2Q96IS3 184 aa7.53□□□□□ -1.2
UBFD1-202ENST00000563366 GPR82Q96P67 336 aa7.53□□□□□ -1.2
UBFD1-202ENST00000563366 SMIM7Q9BQ49 75 aa7.53□□□□□ -1.2
UBFD1-202ENST00000563366 CDC42EP3Q9UKI2 254 aa7.53□□□□□ -1.2
UBFD1-202ENST00000563366 PUS1Q9Y606 427 aaKnown RBP eCLIP7.53□□□□□ -1.2
UBFD1-202ENST00000563366 CCDC168Q8NDH2 2452 aa7.53□□□□□ -1.2
UBFD1-202ENST00000563366 M0R036 132 aa7.52□□□□□ -1.21
UBFD1-202ENST00000563366 EIF3GO75821 320 aaKnown RBP eCLIP7.52□□□□□ -1.21
UBFD1-202ENST00000563366 ELANEP08246 267 aa7.52□□□□□ -1.21
UBFD1-202ENST00000563366 RPL7P18124 248 aaKnown RBP7.52□□□□□ -1.21
UBFD1-202ENST00000563366 ARL3P36405 182 aa7.52□□□□□ -1.21
UBFD1-202ENST00000563366 SRSF2Q01130 221 aaKnown RBP7.52□□□□□ -1.21
UBFD1-202ENST00000563366 FOXE3Q13461 319 aa7.52□□□□□ -1.21
UBFD1-202ENST00000563366 TEX38Q6PEX7 206 aa7.52□□□□□ -1.21
UBFD1-202ENST00000563366 CLEC19AQ6UXS0 136 aa7.52□□□□□ -1.21
UBFD1-202ENST00000563366 Q8N2B8 174 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms