RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 GGACTQ9BVM4 153 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 TMEM231Q9H6L2 316 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 MAP6D1Q9H9H5 199 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 NPVFQ9HCQ7 196 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 OR5AC2Q9NZP5 309 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 DNAH7Q8WXX0 4024 aa6.33□□□□□ -1.4
UBR1-204ENST00000563239 SMCO3A2RU48 225 aa6.32□□□□□ -1.4
UBR1-204ENST00000563239 FABP1P07148 127 aa6.32□□□□□ -1.4
UBR1-204ENST00000563239 PVALBP20472 110 aaPredicted RBP6.32□□□□□ -1.4
UBR1-204ENST00000563239 SULT1A1P50225 295 aa6.32□□□□□ -1.4
UBR1-204ENST00000563239 PLP1P60201 277 aa6.32□□□□□ -1.4
UBR1-204ENST00000563239 SLC38A11Q08AI6 406 aa6.32□□□□□ -1.4
UBR1-204ENST00000563239 PATE2Q6UY27 113 aa6.32□□□□□ -1.4
UBR1-204ENST00000563239 LINC00528Q8N1L1 170 aa6.32□□□□□ -1.4
UBR1-204ENST00000563239 TMEM217Q8N7C4 229 aa6.32□□□□□ -1.4
UBR1-204ENST00000563239 PPP1R1CQ8WVI7 109 aa6.32□□□□□ -1.4
UBR1-204ENST00000563239 GRAMD2BQ96HH9 432 aa6.32□□□□□ -1.4
UBR1-204ENST00000563239 MGST2Q99735 147 aa6.32□□□□□ -1.4
UBR1-204ENST00000563239 MGAT4CQ9UBM8 478 aa6.32□□□□□ -1.4
UBR1-204ENST00000563239 SLC45A2Q9UMX9 530 aa6.32□□□□□ -1.4
UBR1-204ENST00000563239 U3KQK5 164 aa6.32□□□□□ -1.4
UBR1-204ENST00000563239 HELTA6NFD8 242 aa6.31□□□□□ -1.4
UBR1-204ENST00000563239 DNASE2O00115 360 aaPredicted RBP6.31□□□□□ -1.4
UBR1-204ENST00000563239 MPC2O95563 127 aa6.31□□□□□ -1.4
UBR1-204ENST00000563239 CFDP00746 253 aaPredicted RBP6.31□□□□□ -1.4
UBR1-204ENST00000563239 LINC00869P0C866 280 aa6.31□□□□□ -1.4
UBR1-204ENST00000563239 ORM2P19652 201 aa6.31□□□□□ -1.4
UBR1-204ENST00000563239 RPL11P62913 178 aaKnown RBP6.31□□□□□ -1.4
UBR1-204ENST00000563239 PAFAH1B2P68402 229 aa6.31□□□□□ -1.4
UBR1-204ENST00000563239 CYCSP99999 105 aaKnown RBP6.31□□□□□ -1.4
UBR1-204ENST00000563239 NHLH2Q02577 135 aa6.31□□□□□ -1.4
UBR1-204ENST00000563239 OXA1LQ15070 435 aa6.31□□□□□ -1.4
UBR1-204ENST00000563239 FCN2Q15485 313 aa6.31□□□□□ -1.4
UBR1-204ENST00000563239 LRRC37A5PQ49AS3 106 aa6.31□□□□□ -1.4
UBR1-204ENST00000563239 C1orf194Q5T5A4 169 aa6.31□□□□□ -1.4
UBR1-204ENST00000563239 TEPPQ6URK8 271 aa6.31□□□□□ -1.4
UBR1-204ENST00000563239 SIGLEC15Q6ZMC9 328 aa6.31□□□□□ -1.4
UBR1-204ENST00000563239 BPIFCQ8NFQ6 507 aa6.31□□□□□ -1.4
UBR1-204ENST00000563239 STXBP6Q8NFX7 210 aa6.31□□□□□ -1.4
UBR1-204ENST00000563239 OR11H7Q8NGC8 314 aa6.31□□□□□ -1.4
UBR1-204ENST00000563239 NARS2Q96I59 477 aaKnown RBP6.31□□□□□ -1.4
UBR1-204ENST00000563239 RCHY1Q96PM5 261 aa6.31□□□□□ -1.4
UBR1-204ENST00000563239 RETNQ9HD89 108 aa6.31□□□□□ -1.4
UBR1-204ENST00000563239 WDR83OSQ9Y284 106 aa6.31□□□□□ -1.4
UBR1-204ENST00000563239 LOC102724200A0A096LPH7 203 aaPredicted RBP6.3□□□□□ -1.4
UBR1-204ENST00000563239 ZNF98A6NK75 572 aa6.3□□□□□ -1.4
UBR1-204ENST00000563239 E5RGE8 158 aa6.3□□□□□ -1.4
UBR1-204ENST00000563239 H3BRN7 92 aa6.3□□□□□ -1.4
UBR1-204ENST00000563239 SOCS3O14543 225 aa6.3□□□□□ -1.4
UBR1-204ENST00000563239 AGPAT2O15120 278 aa6.3□□□□□ -1.4
UBR1-204ENST00000563239 S100A11P31949 105 aa6.3□□□□□ -1.4
UBR1-204ENST00000563239 CMC4P56277 68 aaPredicted RBP6.3□□□□□ -1.4
UBR1-204ENST00000563239 DEFB131AP59861 70 aa6.3□□□□□ -1.4
UBR1-204ENST00000563239 SELENOTP62341 195 aa6.3□□□□□ -1.4
UBR1-204ENST00000563239 EWSR1Q01844 656 aaKnown RBP eCLIP6.3□□□□□ -1.4
UBR1-204ENST00000563239 RGS21Q2M5E4 152 aa6.3□□□□□ -1.4
UBR1-204ENST00000563239 OR1B1Q8NGR6 318 aa6.3□□□□□ -1.4
UBR1-204ENST00000563239 GGTLC1Q9BX51 225 aa6.3□□□□□ -1.4
UBR1-204ENST00000563239 SLC25A32Q9H2D1 315 aa6.3□□□□□ -1.4
UBR1-204ENST00000563239 NRN1Q9NPD7 142 aa6.3□□□□□ -1.4
UBR1-204ENST00000563239 UQCC1Q9NVA1 299 aa6.3□□□□□ -1.4
UBR1-204ENST00000563239 DOK5Q9P104 306 aa6.3□□□□□ -1.4
UBR1-204ENST00000563239 HYPMO75409 117 aa6.29□□□□□ -1.4
UBR1-204ENST00000563239 RLN2P04090 185 aa6.29□□□□□ -1.4
UBR1-204ENST00000563239 ZNF688P0C7X2 276 aa6.29□□□□□ -1.4
UBR1-204ENST00000563239 LYL1P12980 280 aa6.29□□□□□ -1.4
UBR1-204ENST00000563239 RPL35AP18077 110 aaKnown RBP6.29□□□□□ -1.4
UBR1-204ENST00000563239 NUP62P37198 522 aaPredicted RBP6.29□□□□□ -1.4
UBR1-204ENST00000563239 AP2S1P53680 142 aaPredicted RBP6.29□□□□□ -1.4
UBR1-204ENST00000563239 LEMD1Q68G75 181 aa6.29□□□□□ -1.4
UBR1-204ENST00000563239 STX12Q86Y82 276 aa6.29□□□□□ -1.4
UBR1-204ENST00000563239 CHAC2Q8WUX2 184 aa6.29□□□□□ -1.4
UBR1-204ENST00000563239 TMEM37Q8WXS4 190 aa6.29□□□□□ -1.4
UBR1-204ENST00000563239 UHRF2Q96PU4 802 aa6.29□□□□□ -1.4
UBR1-204ENST00000563239 SPATA25Q9BR10 227 aa6.29□□□□□ -1.4
UBR1-204ENST00000563239 SHANK2-AS3Q9BTD1 123 aa6.29□□□□□ -1.4
UBR1-204ENST00000563239 TMEM147Q9BVK8 224 aa6.29□□□□□ -1.4
UBR1-204ENST00000563239 SCRT1Q9BWW7 348 aa6.29□□□□□ -1.4
UBR1-204ENST00000563239 SLC25A39Q9BZJ4 359 aaPredicted RBP6.29□□□□□ -1.4
UBR1-204ENST00000563239 ARL6Q9H0F7 186 aa6.29□□□□□ -1.4
UBR1-204ENST00000563239 ZMAT4Q9H898 229 aa6.29□□□□□ -1.4
UBR1-204ENST00000563239 EPPK1P58107 5090 aaKnown RBP6.29□□□□□ -1.4
UBR1-204ENST00000563239 UBE2L5PA0A1B0GUS4 154 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 KNCNA6PVL3 124 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 MRPS12O15235 138 aaKnown RBP6.28□□□□□ -1.4
UBR1-204ENST00000563239 GIG44P09565 113 aaPredicted RBP6.28□□□□□ -1.4
UBR1-204ENST00000563239 CAMLGP49069 296 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 HBG1P69891 147 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 HBG2P69892 147 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 OPCMLQ14982 345 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 ATP6V1FQ16864 119 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 Q5BKY6 102 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 MORN5Q5VZ52 161 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 MIC13Q5XKP0 118 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 ZNF546Q86UE3 836 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 OR8I2Q8N0Y5 310 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 OR5C1Q8NGR4 320 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 OVOL2Q9BRP0 275 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 SLC25A31Q9H0C2 315 aa6.28□□□□□ -1.4
UBR1-204ENST00000563239 MED28Q9H204 178 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms