RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 SLX4Q8IY92 1834 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 KTN1Q86UP2 1357 aaKnown RBP1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 ABCC12Q96J65 1359 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 CPSF1Q10570 1443 aaKnown RBP1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 FMN1Q68DA7 1419 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 UACAQ9BZF9 1416 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 DICER1Q9UPY3 1922 aaKnown RBP1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 CCDC141Q6ZP82 1450 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 ARHGAP35Q9NRY4 1499 aa1.56□□□□□ -2.16
SHCBP1-202ENST00000563219 ZCCHC11Q5TAX3 1644 aaKnown RBP1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 HECW1Q76N89 1606 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 MAST2Q6P0Q8 1798 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 WNK3Q9BYP7 1800 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 TRBV20OR9-2A0A075B6H5 130 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 ODF3BA8MYP8 253 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 OVOL1O14753 267 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 APODP05090 189 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 CD2P06729 351 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 GPX1P07203 203 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 BCL2P10415 239 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 IL7P13232 177 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 HLA-EP13747 358 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 HIST1H1DP16402 221 aaKnown RBP1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 PPIBP23284 216 aaKnown RBP1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 SRIP30626 198 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 BRS3P32247 399 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 RBM11P57052 281 aaKnown RBP1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 FXYD7P58549 80 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 CLLU1Q5K131 121 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 RPL22L1Q6P5R6 122 aaKnown RBP1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 GLIPR1L1Q6UWM5 242 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 ZNF705AQ6ZN79 300 aaPredicted RBP1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 LINC00299Q6ZSB3 139 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 NUP35Q8NFH5 326 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 OR8B12Q8NGG6 310 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 LCN9Q8WX39 176 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 S100ZQ8WXG8 99 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 TMEM106AQ96A25 262 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 MAGOHBQ96A72 148 aaKnown RBP1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 ADAT3Q96EY9 351 aaPredicted RBP1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 IMMP2LQ96T52 175 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 MED9Q9NWA0 146 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 OR5AC2Q9NZP5 309 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 AK3Q9UIJ7 227 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 BOKQ9UMX3 212 aaPredicted RBP1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 CCL26Q9Y258 94 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 MED31Q9Y3C7 131 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 MYH3P11055 1940 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 OVOS2A0A0G2JMS6 1433 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 DISP2A7MBM2 1401 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 MYOM3Q5VTT5 1437 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 DNMBPQ6XZF7 1577 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 BAZ1AQ9NRL2 1556 aaPredicted RBP1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 HECW2Q9P2P5 1572 aa1.55□□□□□ -2.16
SHCBP1-202ENST00000563219 WDR90Q96KV7 1748 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 CASZ1Q86V15 1759 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 PTPRSQ13332 1948 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 SCN9AQ15858 1988 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 IGHV3-15A0A0B4J1V0 119 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 A0A0G2JMM0 328 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 A0A1W2PPB8 328 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 TMEM212A6NML5 194 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 KIR3DP1A8MWS1 328 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 CLDN25C9JDP6 229 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 LEPROTO15243 131 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 NDUFB2O95178 105 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 ZNF728P0DKX0 622 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 CSRP1P21291 193 aaKnown RBP1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 RPS4Y1P22090 263 aaKnown RBP1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 HLA-DMBP28068 263 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 CASP1P29466 404 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 ETV6P41212 452 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 ATP5G3P48201 142 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 NDUFA6P56556 154 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 TPPP2P59282 170 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 GNGT1P63211 74 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 RHOGP84095 191 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 MYL5Q02045 173 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 MEF2BQ02080 365 aaPredicted RBP1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 HSD52Q0P140 79 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 C12orf74Q32Q52 190 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 CCSMST1Q4G0I0 132 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 FKBP1CQ5VVH2 108 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 HRCT1Q6UXD1 115 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 Q6ZS52 159 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 SLC35E3Q7Z769 313 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 GKN2Q86XP6 184 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 TEX29Q8N6K0 151 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 OR52R1Q8NGF1 315 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 CLDND2Q8NHS1 167 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 SLC25A40Q8TBP6 338 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 SMCR5Q8TEV8 140 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 DERL1Q9BUN8 251 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 IMUPQ9GZP8 106 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 WDR61Q9GZS3 305 aaKnown RBP1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 PRO1933Q9H354 126 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 SAR1AQ9NR31 198 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 TAS2R8Q9NYW2 309 aa1.54□□□□□ -2.16
SHCBP1-202ENST00000563219 TVP23BQ9NYZ1 205 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms