RNA–Protein interactions for RNA: ENST00000562670.5

CLK3-209, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-209ENST00000562670 PROK1P58294 105 aa10.73□□□□□ -0.69
CLK3-209ENST00000562670 USF2Q15853 346 aaPredicted RBP10.73□□□□□ -0.69
CLK3-209ENST00000562670 SPATA31B1PQ5VZV4 182 aa10.73□□□□□ -0.69
CLK3-209ENST00000562670 TOMM20LQ6UXN7 152 aa10.73□□□□□ -0.69
CLK3-209ENST00000562670 LCNL1Q6ZST4 164 aa10.73□□□□□ -0.69
CLK3-209ENST00000562670 MIR17HGQ75NE6 70 aa10.73□□□□□ -0.69
CLK3-209ENST00000562670 SUN5Q8TC36 379 aa10.73□□□□□ -0.69
CLK3-209ENST00000562670 C4orf3Q8WVX3 66 aa10.73□□□□□ -0.69
CLK3-209ENST00000562670 FAM167A-AS1Q96KT0 104 aa10.73□□□□□ -0.69
CLK3-209ENST00000562670 FAM210AQ96ND0 272 aa10.73□□□□□ -0.69
CLK3-209ENST00000562670 SHANK2-AS3Q9BTD1 123 aa10.73□□□□□ -0.69
CLK3-209ENST00000562670 PBDC1Q9BVG4 233 aa10.73□□□□□ -0.69
CLK3-209ENST00000562670 SLC25A39Q9BZJ4 359 aaPredicted RBP10.73□□□□□ -0.69
CLK3-209ENST00000562670 SMDT1Q9H4I9 107 aa10.73□□□□□ -0.69
CLK3-209ENST00000562670 MANBALQ9NQG1 85 aa10.73□□□□□ -0.69
CLK3-209ENST00000562670 DOK5Q9P104 306 aa10.73□□□□□ -0.69
CLK3-209ENST00000562670 PPP5D1E7EU14 171 aa10.72□□□□□ -0.69
CLK3-209ENST00000562670 I3L521 148 aa10.72□□□□□ -0.69
CLK3-209ENST00000562670 IFNA1P01562 189 aa10.72□□□□□ -0.69
CLK3-209ENST00000562670 TRBV12-3P01733 135 aa10.72□□□□□ -0.69
CLK3-209ENST00000562670 IGHV3-11P01762 117 aa10.72□□□□□ -0.69
CLK3-209ENST00000562670 TCTEX1D4Q5JR98 221 aa10.72□□□□□ -0.69
CLK3-209ENST00000562670 TMEM190Q8WZ59 177 aa10.72□□□□□ -0.69
CLK3-209ENST00000562670 UHRF2Q96PU4 802 aa10.72□□□□□ -0.69
CLK3-209ENST00000562670 GNB4Q9HAV0 340 aa10.72□□□□□ -0.69
CLK3-209ENST00000562670 TMEM167BQ9NRX6 74 aa10.72□□□□□ -0.69
CLK3-209ENST00000562670 TMEM14CQ9P0S9 112 aa10.72□□□□□ -0.69
CLK3-209ENST00000562670 RABAC1Q9UI14 185 aa10.72□□□□□ -0.69
CLK3-209ENST00000562670 NF1P21359 2839 aa10.71□□□□□ -0.69
CLK3-209ENST00000562670 GCHFRP30047 84 aa10.71□□□□□ -0.69
CLK3-209ENST00000562670 FGF8P55075 233 aaPredicted RBP10.71□□□□□ -0.69
CLK3-209ENST00000562670 MORN5Q5VZ52 161 aa10.71□□□□□ -0.69
CLK3-209ENST00000562670 GPHB5Q86YW7 130 aa10.71□□□□□ -0.69
CLK3-209ENST00000562670 SCRT1Q9BWW7 348 aa10.71□□□□□ -0.69
CLK3-209ENST00000562670 SLC25A2Q9BXI2 301 aa10.71□□□□□ -0.69
CLK3-209ENST00000562670 RNF114Q9Y508 228 aa10.71□□□□□ -0.69
CLK3-209ENST00000562670 MAST4O15021 2626 aa10.7□□□□□ -0.7
CLK3-209ENST00000562670 CD5P06127 495 aa10.7□□□□□ -0.7
CLK3-209ENST00000562670 BCL2P10415 239 aa10.7□□□□□ -0.7
CLK3-209ENST00000562670 GP9P14770 177 aa10.7□□□□□ -0.7
CLK3-209ENST00000562670 CRYBB3P26998 211 aa10.7□□□□□ -0.7
CLK3-209ENST00000562670 CCL20P78556 96 aa10.7□□□□□ -0.7
CLK3-209ENST00000562670 ZNF506Q5JVG8 444 aa10.7□□□□□ -0.7
CLK3-209ENST00000562670 C1orf194Q5T5A4 169 aa10.7□□□□□ -0.7
CLK3-209ENST00000562670 ZNF503Q96F45 646 aa10.7□□□□□ -0.7
CLK3-209ENST00000562670 METTL26Q96S19 204 aa10.7□□□□□ -0.7
CLK3-209ENST00000562670 TXNDC17Q9BRA2 123 aa10.7□□□□□ -0.7
CLK3-209ENST00000562670 U3KQE9 123 aa10.7□□□□□ -0.7
CLK3-209ENST00000562670 LOC102723971A0A1B0GUV8 181 aa10.69□□□□□ -0.7
CLK3-209ENST00000562670 ANKRD34BA5PLL1 514 aa10.69□□□□□ -0.7
CLK3-209ENST00000562670 ZNF98A6NK75 572 aa10.69□□□□□ -0.7
CLK3-209ENST00000562670 A8MWP6 167 aa10.69□□□□□ -0.7
CLK3-209ENST00000562670 K7EMT4 169 aa10.69□□□□□ -0.7
CLK3-209ENST00000562670 HMGB3O15347 200 aaKnown RBP10.69□□□□□ -0.7
CLK3-209ENST00000562670 OR7C2O60412 319 aa10.69□□□□□ -0.7
CLK3-209ENST00000562670 HSPB1P04792 205 aaKnown RBP10.69□□□□□ -0.7
CLK3-209ENST00000562670 ZP3P21754 424 aa10.69□□□□□ -0.7
CLK3-209ENST00000562670 GUK1Q16774 197 aa10.69□□□□□ -0.7
CLK3-209ENST00000562670 REC114Q7Z4M0 266 aa10.69□□□□□ -0.7
CLK3-209ENST00000562670 SLC7A5P1Q8MH63 180 aa10.69□□□□□ -0.7
CLK3-209ENST00000562670 GPR82Q96P67 336 aa10.69□□□□□ -0.7
CLK3-209ENST00000562670 A0A1B0GV50 99 aa10.68□□□□□ -0.7
CLK3-209ENST00000562670 RBFOX3A6NFN3 312 aa10.68□□□□□ -0.7
CLK3-209ENST00000562670 LGALS9O00182 355 aa10.68□□□□□ -0.7
CLK3-209ENST00000562670 UBE2L3P68036 154 aaKnown RBP10.68□□□□□ -0.7
CLK3-209ENST00000562670 FAM106AQ4KMX7 169 aa10.68□□□□□ -0.7
CLK3-209ENST00000562670 BPIFA4PQ86YQ2 179 aa10.68□□□□□ -0.7
CLK3-209ENST00000562670 PAXXQ9BUH6 204 aa10.68□□□□□ -0.7
CLK3-209ENST00000562670 OR51M1Q9H341 326 aa10.68□□□□□ -0.7
CLK3-209ENST00000562670 DAZ1Q9NQZ3 744 aaKnown RBP10.68□□□□□ -0.7
CLK3-209ENST00000562670 GNG13Q9P2W3 67 aa10.68□□□□□ -0.7
CLK3-209ENST00000562670 VAX2Q9UIW0 290 aa10.68□□□□□ -0.7
CLK3-209ENST00000562670 TSSC4Q9Y5U2 329 aaPredicted RBP10.68□□□□□ -0.7
CLK3-209ENST00000562670 TRAV5A0A0B4J249 113 aa10.67□□□□□ -0.7
CLK3-209ENST00000562670 IGHV3-35A0A0C4DH35 117 aa10.67□□□□□ -0.7
CLK3-209ENST00000562670 MRPS12O15235 138 aaKnown RBP10.67□□□□□ -0.7
CLK3-209ENST00000562670 BUB3O43684 328 aa10.67□□□□□ -0.7
CLK3-209ENST00000562670 EIF3GO75821 320 aaKnown RBP eCLIP10.67□□□□□ -0.7
CLK3-209ENST00000562670 RPL7P18124 248 aaKnown RBP10.67□□□□□ -0.7
CLK3-209ENST00000562670 NPPCP23582 126 aa10.67□□□□□ -0.7
CLK3-209ENST00000562670 FOXL1Q12952 345 aa10.67□□□□□ -0.7
CLK3-209ENST00000562670 PEA15Q15121 130 aa10.67□□□□□ -0.7
CLK3-209ENST00000562670 RPEL1Q2QD12 228 aa10.67□□□□□ -0.7
CLK3-209ENST00000562670 TOR2AQ5JU69 321 aa10.67□□□□□ -0.7
CLK3-209ENST00000562670 FXYD5Q96DB9 178 aa10.67□□□□□ -0.7
CLK3-209ENST00000562670 NARS2Q96I59 477 aaKnown RBP10.67□□□□□ -0.7
CLK3-209ENST00000562670 TMPRSS5Q9H3S3 457 aa10.67□□□□□ -0.7
CLK3-209ENST00000562670 UFC1Q9Y3C8 167 aa10.67□□□□□ -0.7
CLK3-209ENST00000562670 C2CD3Q4AC94 2353 aa10.67□□□□□ -0.7
CLK3-209ENST00000562670 IGHV4OR15-8A0A075B7B6 117 aa10.66□□□□□ -0.7
CLK3-209ENST00000562670 A0A087WW49 117 aa10.66□□□□□ -0.7
CLK3-209ENST00000562670 A0A1W2PRE2 83 aa10.66□□□□□ -0.7
CLK3-209ENST00000562670 ATP6V1G1O75348 118 aa10.66□□□□□ -0.7
CLK3-209ENST00000562670 IGLC2P0DOY2 106 aa10.66□□□□□ -0.7
CLK3-209ENST00000562670 HIST1H1EP10412 219 aaKnown RBP10.66□□□□□ -0.7
CLK3-209ENST00000562670 CD28P10747 220 aa10.66□□□□□ -0.7
CLK3-209ENST00000562670 MEF2BQ02080 365 aaPredicted RBP10.66□□□□□ -0.7
CLK3-209ENST00000562670 FHL3Q13643 280 aa10.66□□□□□ -0.7
CLK3-209ENST00000562670 PDE6HQ13956 83 aa10.66□□□□□ -0.7
CLK3-209ENST00000562670 ICAM4Q14773 271 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms