RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 FCN2Q15485 313 aa12.45□□□□□ -0.42
CLK3-207ENST00000562389 ATP6V1FQ16864 119 aa12.45□□□□□ -0.42
CLK3-207ENST00000562389 SIGLEC15Q6ZMC9 328 aa12.45□□□□□ -0.42
CLK3-207ENST00000562389 LINC00322Q6ZN03 302 aaPredicted RBP12.45□□□□□ -0.42
CLK3-207ENST00000562389 SBSPONQ8IVN8 264 aa12.45□□□□□ -0.42
CLK3-207ENST00000562389 STPG3Q8N7X2 389 aa12.45□□□□□ -0.42
CLK3-207ENST00000562389 OR11H7Q8NGC8 314 aa12.45□□□□□ -0.42
CLK3-207ENST00000562389 RNF126Q9BV68 326 aa12.45□□□□□ -0.42
CLK3-207ENST00000562389 LINC00869P0C866 280 aa12.44□□□□□ -0.42
CLK3-207ENST00000562389 S100A7P31151 101 aa12.44□□□□□ -0.42
CLK3-207ENST00000562389 BAXQ07812 192 aa12.44□□□□□ -0.42
CLK3-207ENST00000562389 C1orf194Q5T5A4 169 aa12.44□□□□□ -0.42
CLK3-207ENST00000562389 ZNF546Q86UE3 836 aa12.44□□□□□ -0.42
CLK3-207ENST00000562389 STXBP6Q8NFX7 210 aa12.44□□□□□ -0.42
CLK3-207ENST00000562389 MGST2Q99735 147 aa12.44□□□□□ -0.42
CLK3-207ENST00000562389 ASCL2Q99929 193 aa12.44□□□□□ -0.42
CLK3-207ENST00000562389 WDR83OSQ9Y284 106 aa12.44□□□□□ -0.42
CLK3-207ENST00000562389 K7EQG2 157 aa12.43□□□□□ -0.42
CLK3-207ENST00000562389 AGPAT2O15120 278 aa12.43□□□□□ -0.42
CLK3-207ENST00000562389 ORM2P19652 201 aa12.43□□□□□ -0.42
CLK3-207ENST00000562389 NHLH2Q02577 135 aa12.43□□□□□ -0.42
CLK3-207ENST00000562389 WFDC3Q8IUB2 231 aa12.43□□□□□ -0.42
CLK3-207ENST00000562389 OR1B1Q8NGR6 318 aa12.43□□□□□ -0.42
CLK3-207ENST00000562389 DCANP1Q8TF63 244 aa12.43□□□□□ -0.42
CLK3-207ENST00000562389 ASB13Q8WXK3 278 aa12.43□□□□□ -0.42
CLK3-207ENST00000562389 PPP1R14BQ96C90 147 aa12.43□□□□□ -0.42
CLK3-207ENST00000562389 CITED4Q96RK1 184 aa12.43□□□□□ -0.42
CLK3-207ENST00000562389 MAP6D1Q9H9H5 199 aa12.43□□□□□ -0.42
CLK3-207ENST00000562389 MBD2Q9UBB5 411 aa12.43□□□□□ -0.42
CLK3-207ENST00000562389 FBXL17Q9UF56 701 aa12.43□□□□□ -0.42
CLK3-207ENST00000562389 UBE2L5PA0A1B0GUS4 154 aa12.42□□□□□ -0.42
CLK3-207ENST00000562389 RBMY1BA6NDE4 496 aaKnown RBP12.42□□□□□ -0.42
CLK3-207ENST00000562389 RBMY1EA6NEQ0 496 aaKnown RBP12.42□□□□□ -0.42
CLK3-207ENST00000562389 RBMY1DP0C7P1 496 aaKnown RBP12.42□□□□□ -0.42
CLK3-207ENST00000562389 LYL1P12980 280 aa12.42□□□□□ -0.42
CLK3-207ENST00000562389 RAB31Q13636 194 aa12.42□□□□□ -0.42
CLK3-207ENST00000562389 PXDC1Q5TGL8 231 aa12.42□□□□□ -0.42
CLK3-207ENST00000562389 OR5C1Q8NGR4 320 aa12.42□□□□□ -0.42
CLK3-207ENST00000562389 DNAH9Q9NYC9 4486 aa12.42□□□□□ -0.42
CLK3-207ENST00000562389 ZNF98A6NK75 572 aa12.41□□□□□ -0.42
CLK3-207ENST00000562389 H3BRN7 92 aa12.41□□□□□ -0.42
CLK3-207ENST00000562389 HYPMO75409 117 aa12.41□□□□□ -0.42
CLK3-207ENST00000562389 CAMLGP49069 296 aa12.41□□□□□ -0.42
CLK3-207ENST00000562389 RAP2BP61225 183 aa12.41□□□□□ -0.42
CLK3-207ENST00000562389 HAGHQ16775 308 aa12.41□□□□□ -0.42
CLK3-207ENST00000562389 FAM24BQ8N5W8 94 aa12.41□□□□□ -0.42
CLK3-207ENST00000562389 CHAC2Q8WUX2 184 aa12.41□□□□□ -0.42
CLK3-207ENST00000562389 TM2D3Q9BRN9 247 aa12.41□□□□□ -0.42
CLK3-207ENST00000562389 NRN1Q9NPD7 142 aa12.41□□□□□ -0.42
CLK3-207ENST00000562389 DOK5Q9P104 306 aa12.41□□□□□ -0.42
CLK3-207ENST00000562389 HIGD1AQ9Y241 93 aa12.41□□□□□ -0.42
CLK3-207ENST00000562389 GIPP09681 153 aaPredicted RBP12.4□□□□□ -0.42
CLK3-207ENST00000562389 S100A7AQ86SG5 101 aa12.4□□□□□ -0.42
CLK3-207ENST00000562389 OR8I2Q8N0Y5 310 aa12.4□□□□□ -0.42
CLK3-207ENST00000562389 THAP6Q8TBB0 222 aa12.4□□□□□ -0.42
CLK3-207ENST00000562389 SHANK2-AS3Q9BTD1 123 aa12.4□□□□□ -0.42
CLK3-207ENST00000562389 GGTLC1Q9BX51 225 aa12.4□□□□□ -0.42
CLK3-207ENST00000562389 SLC25A39Q9BZJ4 359 aaPredicted RBP12.4□□□□□ -0.42
CLK3-207ENST00000562389 ARL6Q9H0F7 186 aa12.4□□□□□ -0.42
CLK3-207ENST00000562389 HSPB11Q9Y547 144 aa12.4□□□□□ -0.42
CLK3-207ENST00000562389 LOC102724200A0A096LPH7 203 aaPredicted RBP12.39□□□□□ -0.43
CLK3-207ENST00000562389 MPDU1O75352 247 aa12.39□□□□□ -0.43
CLK3-207ENST00000562389 OR5G3P0C626 314 aa12.39□□□□□ -0.43
CLK3-207ENST00000562389 FGF7P21781 194 aa12.39□□□□□ -0.43
CLK3-207ENST00000562389 RPL12P30050 165 aaKnown RBP12.39□□□□□ -0.43
CLK3-207ENST00000562389 DEFB131AP59861 70 aa12.39□□□□□ -0.43
CLK3-207ENST00000562389 PRR20EP86478 221 aa12.39□□□□□ -0.43
CLK3-207ENST00000562389 PRR20CP86479 221 aa12.39□□□□□ -0.43
CLK3-207ENST00000562389 PRR20DP86480 221 aa12.39□□□□□ -0.43
CLK3-207ENST00000562389 PRR20BP86481 221 aa12.39□□□□□ -0.43
CLK3-207ENST00000562389 PRR20AP86496 221 aa12.39□□□□□ -0.43
CLK3-207ENST00000562389 OPCMLQ14982 345 aa12.39□□□□□ -0.43
CLK3-207ENST00000562389 APRG1Q8IVJ8 170 aa12.39□□□□□ -0.43
CLK3-207ENST00000562389 GPR82Q96P67 336 aa12.39□□□□□ -0.43
CLK3-207ENST00000562389 ARV1Q9H2C2 271 aa12.39□□□□□ -0.43
CLK3-207ENST00000562389 SLC25A32Q9H2D1 315 aa12.39□□□□□ -0.43
CLK3-207ENST00000562389 ZMAT4Q9H898 229 aa12.39□□□□□ -0.43
CLK3-207ENST00000562389 SLC25A22Q9H936 323 aa12.39□□□□□ -0.43
CLK3-207ENST00000562389 SEPSECSQ9HD40 501 aaKnown RBP12.39□□□□□ -0.43
CLK3-207ENST00000562389 GALR1P47211 349 aa12.38□□□□□ -0.43
CLK3-207ENST00000562389 RPL29P47914 159 aaKnown RBP12.38□□□□□ -0.43
CLK3-207ENST00000562389 FGL1Q08830 312 aa12.38□□□□□ -0.43
CLK3-207ENST00000562389 CLINT1Q14677 625 aa12.38□□□□□ -0.43
CLK3-207ENST00000562389 MIC13Q5XKP0 118 aa12.38□□□□□ -0.43
CLK3-207ENST00000562389 PATE2Q6UY27 113 aa12.38□□□□□ -0.43
CLK3-207ENST00000562389 SCRT1Q9BWW7 348 aa12.38□□□□□ -0.43
CLK3-207ENST00000562389 TGP01266 2768 aa12.37□□□□□ -0.43
CLK3-207ENST00000562389 ZNF688P0C7X2 276 aa12.37□□□□□ -0.43
CLK3-207ENST00000562389 ZNF124Q15973 351 aa12.37□□□□□ -0.43
CLK3-207ENST00000562389 Q6ZRG5 221 aa12.37□□□□□ -0.43
CLK3-207ENST00000562389 UHRF2Q96PU4 802 aa12.37□□□□□ -0.43
CLK3-207ENST00000562389 ATP5SQ99766 215 aa12.37□□□□□ -0.43
CLK3-207ENST00000562389 SPATA25Q9BR10 227 aa12.37□□□□□ -0.43
CLK3-207ENST00000562389 NPCDR1Q9BY65 106 aa12.37□□□□□ -0.43
CLK3-207ENST00000562389 RNF24Q9Y225 148 aa12.37□□□□□ -0.43
CLK3-207ENST00000562389 U3KQK5 164 aa12.37□□□□□ -0.43
CLK3-207ENST00000562389 ELOA3CA0A087WX78 387 aaPredicted RBP12.36□□□□□ -0.43
CLK3-207ENST00000562389 SOCS3O14543 225 aa12.36□□□□□ -0.43
CLK3-207ENST00000562389 COX7A2P2O60397 106 aa12.36□□□□□ -0.43
CLK3-207ENST00000562389 B2MP61769 119 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms