RNA–Protein interactions for RNA: ENST00000561869.1

CHD9-204, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-204ENST00000561869 A8MWV9 139 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 G3V2T6 193 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 H7C1C5 153 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 AIPO00170 330 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 INE1O15225 51 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 MFSD11O43934 449 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 TIMM17BO60830 172 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 NDUFC2O95298 119 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 DHFRP00374 187 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 S100A5P33763 92 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 PHBP35232 272 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 ROMO1P60602 79 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 LCN6P62502 163 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 CNBPP62633 177 aaKnown RBP0.52□□□□□ -2.33
CHD9-204ENST00000561869 UBE2BP63146 152 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 GNG3P63215 75 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 GNG5P63218 68 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 SURF2Q15527 256 aaPredicted RBP0.52□□□□□ -2.33
CHD9-204ENST00000561869 SCGB2B2Q4G0G5 96 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 AKR1C8PQ5T2L2 129 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 BCL2L15Q5TBC7 163 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 PATE2Q6UY27 113 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 SOSTDC1Q6X4U4 206 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 LINC00301Q8NCQ3 95 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 NUP35Q8NFH5 326 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 LYSMD1Q96S90 227 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 ACER3Q9NUN7 267 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 MED29Q9NX70 200 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 SNURFQ9Y675 71 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 CHCHD2Q9Y6H1 151 aaPredicted RBP0.52□□□□□ -2.33
CHD9-204ENST00000561869 ROCK1Q13464 1354 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 UHRF1BP1Q6BDS2 1440 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 TRPM1Q7Z4N2 1603 aa0.52□□□□□ -2.33
CHD9-204ENST00000561869 MUC5BQ9HC84 5762 aaPredicted RBP0.51□□□□□ -2.33
CHD9-204ENST00000561869 E5RI56 91 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 TMEM256-PLSCR3K7ERE1 68 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 GEMIN2O14893 280 aaKnown RBP0.51□□□□□ -2.33
CHD9-204ENST00000561869 NDUFB3O43676 98 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 GADD45GO95257 159 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 ROS1P08922 2347 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 HLA-EP13747 358 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 PPP1R2P41236 205 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 NCAPD3P42695 1498 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 INSL3P51460 131 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 DYNLT3P51808 116 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 PLCXD2Q0VAA5 305 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 TNS3Q68CZ2 1445 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 PPP1R2P3Q6NXS1 205 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 KRTAP26-1Q6PEX3 210 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 UBR2Q8IWV8 1755 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 TAF1LQ8IZX4 1826 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 DOCK4Q8N1I0 1966 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 OR10K1Q8NGX5 313 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 OR13C6PQ8NH95 151 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 C4orf3Q8WVX3 66 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 PATE1Q8WXA2 126 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 PLEKHB2Q96CS7 222 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 LINC00526Q96FQ7 95 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 GPER1Q99527 375 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 PAIP2Q9BPZ3 127 aaKnown RBP0.51□□□□□ -2.33
CHD9-204ENST00000561869 RASL12Q9NYN1 266 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 SS18L2Q9UHA2 77 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 SSR3Q9UNL2 185 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 SCN8AQ9UQD0 1980 aa0.51□□□□□ -2.33
CHD9-204ENST00000561869 EML6Q6ZMW3 1958 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 DLG5Q8TDM6 1919 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 ARHGEF11O15085 1522 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 NISCHQ9Y2I1 1504 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 RFX7Q2KHR2 1363 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 A0A087WSZ3 146 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 TRBV6-8A0A0A6YYG3 113 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 TRAV5A0A0B4J249 113 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 TLCD2A6NGC4 264 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 RIIAD1A6NNX1 92 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 B4DSR2 109 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 ZNF736B4DX44 427 aaPredicted RBP0.5□□□□□ -2.33
CHD9-204ENST00000561869 E7EUB6 86 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 IGLV1-51P01701 117 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 CRHP06850 196 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 NFYBP25208 207 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 ZNF93P35789 620 aaPredicted RBP0.5□□□□□ -2.33
CHD9-204ENST00000561869 GNG10P50151 68 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 CRYBA4P53673 196 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 DSCR4P56555 118 aaPredicted RBP0.5□□□□□ -2.33
CHD9-204ENST00000561869 GRINAQ7Z429 371 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 SMIM20Q8N5G0 67 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 NEK7Q8TDX7 302 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 MALSU1Q96EH3 234 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 GPX7Q96SL4 187 aaPredicted RBP0.5□□□□□ -2.33
CHD9-204ENST00000561869 HOPXQ9BPY8 73 aaPredicted RBP0.5□□□□□ -2.33
CHD9-204ENST00000561869 SLC25A21Q9BQT8 299 aaPredicted RBP0.5□□□□□ -2.33
CHD9-204ENST00000561869 TMEM70Q9BUB7 260 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 RTL8AQ9BWD3 113 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 NPCDR1Q9BY65 106 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 OR2J1Q9GZK6 312 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 C6orf62Q9GZU0 229 aaPredicted RBP0.5□□□□□ -2.33
CHD9-204ENST00000561869 POPDC3Q9HBV1 291 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 PCTPQ9UKL6 214 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 KLK9Q9UKQ9 250 aa0.5□□□□□ -2.33
CHD9-204ENST00000561869 UFC1Q9Y3C8 167 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms