RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 PPT1P50897 306 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 CRIP2P52943 208 aaPredicted RBP5.12□□□□□ -1.59
CAPN3-210ENST00000561817 PLP1P60201 277 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 ZNF90Q03938 601 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 RAB31Q13636 194 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 FAM90A2PQ658T7 463 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 MIR17HGQ75NE6 70 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 SLC35E3Q7Z769 313 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 CIARTQ8N365 385 aaPredicted RBP5.12□□□□□ -1.59
CAPN3-210ENST00000561817 OR4X1Q8NH49 305 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 RXFP4Q8TDU9 374 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 ACY3Q96HD9 319 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 FAM167A-AS1Q96KT0 104 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 C1RLQ9NZP8 487 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 GNG13Q9P2W3 67 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 VAX2Q9UIW0 290 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 ITPR3Q14573 2671 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 TEX15Q9BXT5 2789 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 CREBBPQ92793 2442 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 NOTCH2Q04721 2471 aa5.12□□□□□ -1.59
CAPN3-210ENST00000561817 IGHV3-21A0A0B4J1V1 117 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 FAM74A7A6NL05 159 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 NPIPB6E9PJ23 425 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 IGKV1-17P01599 117 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 ARL14EPLP0DKL9 152 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 NPPCP23582 126 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 GCHFRP30047 84 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 PSMB3P49720 205 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 RPL15P61313 204 aaKnown RBP5.11□□□□□ -1.59
CAPN3-210ENST00000561817 SELENOTP62341 195 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 RHOBP62745 196 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 DEFA5Q01523 94 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 FAM74A3Q4VXF1 159 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 MORN5Q5VZ52 161 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 SPNS3Q6ZMD2 512 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 C9orf139Q6ZV77 190 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 SVBPQ8N300 66 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 CYB561D1Q8N8Q1 229 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 OR1L6Q8NGR2 347 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 SGMS2Q8NHU3 365 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 ZNF48Q96MX3 618 aaPredicted RBP5.11□□□□□ -1.59
CAPN3-210ENST00000561817 SMR3AQ99954 134 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 CITED1Q99966 193 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 C19orf24Q9BVV8 132 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 NKX6-2Q9C056 277 aaPredicted RBP5.11□□□□□ -1.59
CAPN3-210ENST00000561817 TNFRSF19Q9NS68 423 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 FUT9Q9Y231 359 aa5.11□□□□□ -1.59
CAPN3-210ENST00000561817 FLNAP21333 2647 aaKnown RBP5.11□□□□□ -1.59
CAPN3-210ENST00000561817 TRBV9A0A0B4J1U6 114 aa5.1□□□□□ -1.59
CAPN3-210ENST00000561817 ZFP92A6NM28 416 aa5.1□□□□□ -1.59
CAPN3-210ENST00000561817 ATP6V0E1O15342 81 aa5.1□□□□□ -1.59
CAPN3-210ENST00000561817 SAP30O75446 220 aa5.1□□□□□ -1.59
CAPN3-210ENST00000561817 NDUFB8O95169 186 aa5.1□□□□□ -1.59
CAPN3-210ENST00000561817 CXorf1O96002 111 aa5.1□□□□□ -1.59
CAPN3-210ENST00000561817 FCGR2BP31994 310 aaPredicted RBP5.1□□□□□ -1.59
CAPN3-210ENST00000561817 CNN1P51911 297 aaKnown RBP5.1□□□□□ -1.59
CAPN3-210ENST00000561817 MEF2BQ02080 365 aaPredicted RBP5.1□□□□□ -1.59
CAPN3-210ENST00000561817 SOHLH1Q5JUK2 328 aa5.1□□□□□ -1.59
CAPN3-210ENST00000561817 RBMS3Q6XE24 437 aaKnown RBP5.1□□□□□ -1.59
CAPN3-210ENST00000561817 TMEM219Q86XT9 240 aa5.1□□□□□ -1.59
CAPN3-210ENST00000561817 BCL6BQ8N143 479 aaPredicted RBP5.1□□□□□ -1.59
CAPN3-210ENST00000561817 RASL11BQ9BPW5 248 aa5.1□□□□□ -1.59
CAPN3-210ENST00000561817 SLC25A2Q9BXI2 301 aa5.1□□□□□ -1.59
CAPN3-210ENST00000561817 MRPL32Q9BYC8 188 aaKnown RBP5.1□□□□□ -1.59
CAPN3-210ENST00000561817 DNAJC4Q9NNZ3 241 aa5.1□□□□□ -1.59
CAPN3-210ENST00000561817 MANBALQ9NQG1 85 aa5.1□□□□□ -1.59
CAPN3-210ENST00000561817 YAE1D1Q9NRH1 226 aa5.1□□□□□ -1.59
CAPN3-210ENST00000561817 MOB4Q9Y3A3 225 aa5.1□□□□□ -1.59
CAPN3-210ENST00000561817 YTHDF2Q9Y5A9 579 aaKnown RBP5.1□□□□□ -1.59
CAPN3-210ENST00000561817 MAST4O15021 2626 aa5.1□□□□□ -1.59
CAPN3-210ENST00000561817 MXRA5Q9NR99 2828 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 TRAV5A0A0B4J249 113 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 MDFIC2A0A1B0GVS7 189 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 A0A1W2PPV4 95 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 A0A1W2PRX2 142 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 KRTAP9-7A8MTY7 169 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 TMEM250H0YL14 139 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 H3BQ15 152 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 H3BUX3 64 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 SNAPINO95295 136 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 BRI3O95415 125 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 IFNA1P01562 189 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 C8orf88P0DMB2 117 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 PTTG1IPP53801 180 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 SLAQ13239 276 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 BTN1A1Q13410 526 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 DEFB112Q30KQ8 113 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 TIGITQ495A1 244 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 AKIRIN2Q53H80 203 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 FAM78BQ5VT40 261 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 ZNF343Q6P1L6 599 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 OR5T1Q8NG75 326 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 TMEM68Q96MH6 324 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 RNF2Q99496 336 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 SPAG8Q99932 426 aaPredicted RBP5.09□□□□□ -1.59
CAPN3-210ENST00000561817 ALKBH7Q9BT30 221 aaPredicted RBP5.09□□□□□ -1.59
CAPN3-210ENST00000561817 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
CAPN3-210ENST00000561817 TECRQ9NZ01 308 aaKnown RBP5.09□□□□□ -1.59
CAPN3-210ENST00000561817 MRPL27Q9P0M9 148 aaKnown RBP5.09□□□□□ -1.59
CAPN3-210ENST00000561817 ARL2-SNX15V9GYD0 113 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms