RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 IGKV1-5P01602 117 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 RBP4P02753 201 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 P0C879 139 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 CGB3P0DN86 165 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 CGB7P0DN87 165 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 NFYBP25208 207 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 IL3RAP26951 378 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 ATP6V0CP27449 155 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 DUTP33316 252 aaKnown RBP2.44□□□□□ -2.02
SPG11-225ENST00000561391 PPP1CCP36873 323 aaKnown RBP2.44□□□□□ -2.02
SPG11-225ENST00000561391 SNCAP37840 140 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 RAB13P51153 203 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 DYNLT3P51808 116 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 SUB1P53999 127 aaKnown RBP eCLIP2.44□□□□□ -2.02
SPG11-225ENST00000561391 PRRX1P54821 245 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 PAX9P55771 341 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 OR2B8PP59922 312 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 HSPE1P61604 102 aaKnown RBP2.44□□□□□ -2.02
SPG11-225ENST00000561391 RPL31P62899 125 aaKnown RBP2.44□□□□□ -2.02
SPG11-225ENST00000561391 ZNF616Q08AN1 781 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 BTN1A1Q13410 526 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 EIF4EBP1Q13541 118 aaPredicted RBP2.44□□□□□ -2.02
SPG11-225ENST00000561391 EDDM3AQ14507 147 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 CLINT1Q14677 625 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 RHEBQ15382 184 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 POU2AF1Q16633 256 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 GUCA2BQ16661 112 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 GUK1Q16774 197 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 LRRC75BQ2VPJ9 315 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 ZNF876PQ49A33 203 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 FAM74A3Q4VXF1 159 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 KHDC3LQ587J8 217 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 TMEM41BQ5BJD5 291 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 SOHLH1Q5JUK2 328 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 SPANXN5Q5MJ07 72 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 FFAR4Q5NUL3 377 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 C9orf66Q5T8R8 295 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 PRAMEF5Q5TYX0 476 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 NCR3LG1Q68D85 454 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 STUMQ69YW2 141 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 LGALS9CQ6DKI2 356 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 PRR27Q6MZM9 219 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 LYPD2Q6UXB3 125 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 TMEM14EPQ6UXP3 125 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 HEPN1Q6WQI6 88 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 Q6ZRG5 221 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 SLC25A48Q6ZT89 311 aaKnown RBP2.44□□□□□ -2.02
SPG11-225ENST00000561391 ZNF429Q86V71 674 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 BATF2Q8N1L9 274 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 C11orf42Q8N5U0 333 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 HSD17B11Q8NBQ5 300 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 OR4A5Q8NH83 315 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 RFESDQ8TAC1 157 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 VSTM2AQ8TAG5 236 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 FAM213BQ8TBF2 198 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 DTD1Q8TEA8 209 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 SFT2D1Q8WV19 159 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 PHLDA1Q8WV24 401 aaPredicted RBP2.44□□□□□ -2.02
SPG11-225ENST00000561391 PCNPQ8WW12 178 aaKnown RBP2.44□□□□□ -2.02
SPG11-225ENST00000561391 ITLN1Q8WWA0 313 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 MBD3L1Q8WWY6 194 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 TMEM190Q8WZ59 177 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 BTF3L4Q96K17 158 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 LINC00052Q96N35 136 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 NABP2Q9BQ15 211 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 TXNDC17Q9BRA2 123 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 TMEM147Q9BVK8 224 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 SMIM3Q9BZL3 60 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 NKX6-2Q9C056 277 aaPredicted RBP2.44□□□□□ -2.02
SPG11-225ENST00000561391 ACTR3CQ9C0K3 210 aaPredicted RBP2.44□□□□□ -2.02
SPG11-225ENST00000561391 MAGT1Q9H0U3 335 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 WFDC1Q9HC57 220 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 RETNQ9HD89 108 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 ENY2Q9NPA8 101 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 SLC39A9Q9NUM3 307 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 CALYQ9NYX4 217 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 IDI2-AS1Q9NZ38 188 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 KAAG1Q9UBP8 84 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 MIOXQ9UGB7 285 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 PSG11Q9UQ72 335 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 WDR83OSQ9Y284 106 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 ZNF257Q9Y2Q1 563 aa2.44□□□□□ -2.02
SPG11-225ENST00000561391 FAT2Q9NYQ8 4349 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 TRAV39A0A0B4J263 110 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 IGHV3-64DA0A0J9YX35 117 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 A0A1W2PN81 502 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 RBFOX3A6NFN3 312 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 C17orf98A8MV24 154 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 EPM2AB3EWF7 344 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 SEC14L6B5MCN3 397 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 INS-IGF2F8WCM5 200 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 NPFFO15130 113 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 TGOLN2O43493 480 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 ENSAO43768 121 aaKnown RBP2.43□□□□□ -2.02
SPG11-225ENST00000561391 FCGR3BO75015 233 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 BRI3O95415 125 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 TMEM50AO95807 157 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 MT-CO2P00403 227 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 IFNA10P01566 189 aa2.43□□□□□ -2.02
SPG11-225ENST00000561391 IGKV1-39P01597 117 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms