RNA–Protein interactions for RNA: ENST00000561375.5

DCAF11-238, Transcript of DDB1 and CUL4 associated factor 11, human

TSL 3

Gene DCAF11, Length 748 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DCAF11-238	ENST00000561375	NEU1	Q99519	415 aa		12.9	□□□□□ -0.34
DCAF11-238	ENST00000561375	PFDN2	Q9UHV9	154 aa		12.9	□□□□□ -0.34
DCAF11-238	ENST00000561375	KIAA1109	Q2LD37	5005 aa		12.89	□□□□□ -0.35
DCAF11-238	ENST00000561375	GPX4	P36969	197 aa	Predicted RBP	12.89	□□□□□ -0.35
DCAF11-238	ENST00000561375	SRPX	P78539	464 aa		12.89	□□□□□ -0.35
DCAF11-238	ENST00000561375	LINC00336	Q6ZUF6	198 aa		12.89	□□□□□ -0.35
DCAF11-238	ENST00000561375	CCDC190	Q86UF4	302 aa		12.89	□□□□□ -0.35
DCAF11-238	ENST00000561375	PLA2G2E	Q9NZK7	142 aa		12.89	□□□□□ -0.35
DCAF11-238	ENST00000561375	RFNG	Q9Y644	331 aa		12.89	□□□□□ -0.35
DCAF11-238	ENST00000561375		V9GYH0	126 aa		12.89	□□□□□ -0.35
DCAF11-238	ENST00000561375	TMEM189	A5PLL7	270 aa		12.88	□□□□□ -0.35
DCAF11-238	ENST00000561375	FABP1	P07148	127 aa		12.88	□□□□□ -0.35
DCAF11-238	ENST00000561375	HTN3	P15516	51 aa		12.88	□□□□□ -0.35
DCAF11-238	ENST00000561375	ZNF79	Q15937	498 aa		12.88	□□□□□ -0.35
DCAF11-238	ENST00000561375	PYDC2	Q56P42	97 aa		12.88	□□□□□ -0.35
DCAF11-238	ENST00000561375	OR8I2	Q8N0Y5	310 aa		12.88	□□□□□ -0.35
DCAF11-238	ENST00000561375	IGKV1OR2-108	A0A075B7D4	117 aa		12.87	□□□□□ -0.35
DCAF11-238	ENST00000561375		A0A1B0GVY2	172 aa		12.87	□□□□□ -0.35
DCAF11-238	ENST00000561375	SNRPGP15	A8MWD9	76 aa		12.87	□□□□□ -0.35
DCAF11-238	ENST00000561375	C1orf194	Q5T5A4	169 aa		12.87	□□□□□ -0.35
DCAF11-238	ENST00000561375	FAM222A	Q5U5X8	452 aa		12.87	□□□□□ -0.35
DCAF11-238	ENST00000561375	FAM78B	Q5VT40	261 aa		12.87	□□□□□ -0.35
DCAF11-238	ENST00000561375	C20orf173	Q96LM9	149 aa		12.87	□□□□□ -0.35
DCAF11-238	ENST00000561375	TRGV9	Q99603	122 aa		12.87	□□□□□ -0.35
DCAF11-238	ENST00000561375	SLC25A22	Q9H936	323 aa		12.87	□□□□□ -0.35
DCAF11-238	ENST00000561375	DKK2	Q9UBU2	259 aa		12.87	□□□□□ -0.35
DCAF11-238	ENST00000561375	SMIM9	A6NGZ8	99 aa		12.86	□□□□□ -0.35
DCAF11-238	ENST00000561375	PRSS29P	A6NIE9	313 aa		12.86	□□□□□ -0.35
DCAF11-238	ENST00000561375	RTL8C	O15255	209 aa		12.86	□□□□□ -0.35
DCAF11-238	ENST00000561375	PITX3	O75364	302 aa		12.86	□□□□□ -0.35
DCAF11-238	ENST00000561375	VAMP1	P23763	118 aa		12.86	□□□□□ -0.35
DCAF11-238	ENST00000561375	ATP5I	P56385	69 aa	Predicted RBP	12.86	□□□□□ -0.35
DCAF11-238	ENST00000561375	RAB11A	P62491	216 aa		12.86	□□□□□ -0.35
DCAF11-238	ENST00000561375	PSG9	Q00887	426 aa		12.86	□□□□□ -0.35
DCAF11-238	ENST00000561375	EBLN2	Q6P2I7	272 aa		12.86	□□□□□ -0.35
DCAF11-238	ENST00000561375	UBE2DNL	Q8IWF7	75 aa		12.86	□□□□□ -0.35
DCAF11-238	ENST00000561375	C7orf50	Q9BRJ6	194 aa	Known RBP	12.86	□□□□□ -0.35
DCAF11-238	ENST00000561375	MAGT1	Q9H0U3	335 aa		12.86	□□□□□ -0.35
DCAF11-238	ENST00000561375	SLC25A32	Q9H2D1	315 aa		12.86	□□□□□ -0.35
DCAF11-238	ENST00000561375	GOLT1B	Q9Y3E0	138 aa		12.86	□□□□□ -0.35
DCAF11-238	ENST00000561375	IGLV2-18	A0A075B6J9	118 aa		12.85	□□□□□ -0.35
DCAF11-238	ENST00000561375		A0A0J9YX75	114 aa		12.85	□□□□□ -0.35
DCAF11-238	ENST00000561375	LOC102723971	A0A1B0GUV8	181 aa		12.85	□□□□□ -0.35
DCAF11-238	ENST00000561375	ISLR	O14498	428 aa		12.85	□□□□□ -0.35
DCAF11-238	ENST00000561375	C1orf158	Q8N1D5	194 aa		12.85	□□□□□ -0.35
DCAF11-238	ENST00000561375	C16orf92	Q96LL3	132 aa		12.85	□□□□□ -0.35
DCAF11-238	ENST00000561375	NIPSNAP3B	Q9BS92	247 aa		12.85	□□□□□ -0.35
DCAF11-238	ENST00000561375	PCLO	Q9Y6V0	5065 aa		12.85	□□□□□ -0.35
DCAF11-238	ENST00000561375		A6NHS1	94 aa		12.84	□□□□□ -0.35
DCAF11-238	ENST00000561375	HBE1	P02100	147 aa		12.84	□□□□□ -0.35
DCAF11-238	ENST00000561375	PAX9	P55771	341 aa		12.84	□□□□□ -0.35
DCAF11-238	ENST00000561375	SPANXN2	Q5MJ10	180 aa		12.84	□□□□□ -0.35
DCAF11-238	ENST00000561375	THAP8	Q8NA92	274 aa		12.84	□□□□□ -0.35
DCAF11-238	ENST00000561375	TRIM63	Q969Q1	353 aa		12.84	□□□□□ -0.35
DCAF11-238	ENST00000561375	CLUHP3	Q96NS8	147 aa		12.84	□□□□□ -0.35
DCAF11-238	ENST00000561375	YTHDF2	Q9Y5A9	579 aa	Known RBP	12.84	□□□□□ -0.35
DCAF11-238	ENST00000561375	DUXB	A0A1W2PPF3	345 aa		12.83	□□□□□ -0.36
DCAF11-238	ENST00000561375	WRB	O00258	174 aa		12.83	□□□□□ -0.36
DCAF11-238	ENST00000561375	IFNA21	P01568	189 aa		12.83	□□□□□ -0.36
DCAF11-238	ENST00000561375	GATA2	P23769	480 aa	Predicted RBP	12.83	□□□□□ -0.36
DCAF11-238	ENST00000561375	FAU	P35544	74 aa	Known RBP	12.83	□□□□□ -0.36
DCAF11-238	ENST00000561375	GALR1	P47211	349 aa		12.83	□□□□□ -0.36
DCAF11-238	ENST00000561375	TMEM128	Q5BJH2	165 aa		12.83	□□□□□ -0.36
DCAF11-238	ENST00000561375	SPATA31B1P	Q5VZV4	182 aa		12.83	□□□□□ -0.36
DCAF11-238	ENST00000561375	RSG1	Q9BU20	258 aa		12.83	□□□□□ -0.36
DCAF11-238	ENST00000561375	RPRM	Q9NS64	109 aa		12.83	□□□□□ -0.36
DCAF11-238	ENST00000561375	DOK5	Q9P104	306 aa		12.83	□□□□□ -0.36
DCAF11-238	ENST00000561375	NACA	E9PAV3	2078 aa		12.83	□□□□□ -0.36
DCAF11-238	ENST00000561375	FAT2	Q9NYQ8	4349 aa		12.82	□□□□□ -0.36
DCAF11-238	ENST00000561375	TEX48	A0A1B0GUV7	120 aa		12.82	□□□□□ -0.36
DCAF11-238	ENST00000561375		H3BP45	60 aa		12.82	□□□□□ -0.36
DCAF11-238	ENST00000561375	ORM2	P19652	201 aa		12.82	□□□□□ -0.36
DCAF11-238	ENST00000561375	RRN3P1	Q2M238	152 aa		12.82	□□□□□ -0.36
DCAF11-238	ENST00000561375	TMEM182	Q6ZP80	229 aa	Predicted RBP	12.82	□□□□□ -0.36
DCAF11-238	ENST00000561375	C17orf77	Q96MU5	243 aa		12.82	□□□□□ -0.36
DCAF11-238	ENST00000561375	SRR	Q9GZT4	340 aa		12.82	□□□□□ -0.36
DCAF11-238	ENST00000561375	ZNF98	A6NK75	572 aa		12.81	□□□□□ -0.36
DCAF11-238	ENST00000561375	PRSS46	E5RG02	174 aa		12.81	□□□□□ -0.36
DCAF11-238	ENST00000561375	SYNGR2	O43760	224 aa		12.81	□□□□□ -0.36
DCAF11-238	ENST00000561375	MED6	O75586	246 aa		12.81	□□□□□ -0.36
DCAF11-238	ENST00000561375	HOXB5	P09067	269 aa		12.81	□□□□□ -0.36
DCAF11-238	ENST00000561375	MEOX2	P50222	304 aa		12.81	□□□□□ -0.36
DCAF11-238	ENST00000561375	AKR1C1	Q04828	323 aa		12.81	□□□□□ -0.36
DCAF11-238	ENST00000561375	PPP1R1A	Q13522	171 aa		12.81	□□□□□ -0.36
DCAF11-238	ENST00000561375	LGALS9B	Q3B8N2	356 aa		12.81	□□□□□ -0.36
DCAF11-238	ENST00000561375	GGNBP1	Q5YKI7	109 aa		12.81	□□□□□ -0.36
DCAF11-238	ENST00000561375	IGFL4	Q6B9Z1	124 aa		12.81	□□□□□ -0.36
DCAF11-238	ENST00000561375	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		12.81	□□□□□ -0.36
DCAF11-238	ENST00000561375	TOMM5	Q8N4H5	51 aa		12.81	□□□□□ -0.36
DCAF11-238	ENST00000561375	LRTM2	Q8N967	370 aa		12.81	□□□□□ -0.36
DCAF11-238	ENST00000561375	TMEM208	Q9BTX3	173 aa		12.81	□□□□□ -0.36
DCAF11-238	ENST00000561375	PKHD1	P08F94	4074 aa		12.81	□□□□□ -0.36
DCAF11-238	ENST00000561375	DNAH2	Q9P225	4427 aa		12.8	□□□□□ -0.36
DCAF11-238	ENST00000561375	PIGBOS1	A0A0B4J2F0	54 aa		12.8	□□□□□ -0.36
DCAF11-238	ENST00000561375	PRM2	P04554	102 aa		12.8	□□□□□ -0.36
DCAF11-238	ENST00000561375	SLC25A6	P12236	298 aa		12.8	□□□□□ -0.36
DCAF11-238	ENST00000561375	AP3S2	P59780	193 aa		12.8	□□□□□ -0.36
DCAF11-238	ENST00000561375	DAD1	P61803	113 aa		12.8	□□□□□ -0.36
DCAF11-238	ENST00000561375	SPANXN5	Q5MJ07	72 aa		12.8	□□□□□ -0.36
DCAF11-238	ENST00000561375	SAMD13	Q5VXD3	122 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms