RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 C2orf82Q6UX34 121 aa0.08□□□□□ -2.4
PSMA4-221ENST00000560842 TRAPPC5Q8IUR0 188 aa0.08□□□□□ -2.4
PSMA4-221ENST00000560842 OR2T35Q8NGX2 323 aa0.08□□□□□ -2.4
PSMA4-221ENST00000560842 CCDC42Q96M95 316 aa0.08□□□□□ -2.4
PSMA4-221ENST00000560842 NIT2Q9NQR4 276 aa0.08□□□□□ -2.4
PSMA4-221ENST00000560842 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.08□□□□□ -2.4
PSMA4-221ENST00000560842 UQCC1Q9NVA1 299 aa0.08□□□□□ -2.4
PSMA4-221ENST00000560842 TNFSF18Q9UNG2 199 aa0.08□□□□□ -2.4
PSMA4-221ENST00000560842 ARHGEF11O15085 1522 aa0.08□□□□□ -2.4
PSMA4-221ENST00000560842 HAND1O96004 215 aa0.07□□□□□ -2.4
PSMA4-221ENST00000560842 LSM6P62312 80 aaKnown RBP0.07□□□□□ -2.4
PSMA4-221ENST00000560842 RHOBP62745 196 aa0.07□□□□□ -2.4
PSMA4-221ENST00000560842 TRIM4Q9C037 500 aa0.07□□□□□ -2.4
PSMA4-221ENST00000560842 GLTPQ9NZD2 209 aa0.07□□□□□ -2.4
PSMA4-221ENST00000560842 NAV3Q8IVL0 2385 aa0.07□□□□□ -2.4
PSMA4-221ENST00000560842 PLB1Q6P1J6 1458 aa0.07□□□□□ -2.4
PSMA4-221ENST00000560842 MYH10P35580 1976 aa0.06□□□□□ -2.4
PSMA4-221ENST00000560842 MAST4O15021 2626 aa0.06□□□□□ -2.4
PSMA4-221ENST00000560842 FMN1Q68DA7 1419 aa0.06□□□□□ -2.4
PSMA4-221ENST00000560842 A8MWV9 139 aa0.06□□□□□ -2.4
PSMA4-221ENST00000560842 E7EUB6 86 aa0.06□□□□□ -2.4
PSMA4-221ENST00000560842 PDE6DO43924 150 aa0.06□□□□□ -2.4
PSMA4-221ENST00000560842 NIPSNAP2O75323 286 aa0.06□□□□□ -2.4
PSMA4-221ENST00000560842 FOXA3P55318 350 aaPredicted RBP0.06□□□□□ -2.4
PSMA4-221ENST00000560842 DSCR4P56555 118 aaPredicted RBP0.06□□□□□ -2.4
PSMA4-221ENST00000560842 EIF5AP63241 154 aaKnown RBP0.06□□□□□ -2.4
PSMA4-221ENST00000560842 TMEM97Q5BJF2 176 aa0.06□□□□□ -2.4
PSMA4-221ENST00000560842 OR8J2Q8NGG1 315 aa0.06□□□□□ -2.4
PSMA4-221ENST00000560842 OR51A2Q8NGJ7 313 aa0.06□□□□□ -2.4
PSMA4-221ENST00000560842 PRELID3BQ9Y3B1 194 aa0.06□□□□□ -2.4
PSMA4-221ENST00000560842 ASH1LQ9NR48 2969 aaKnown RBP0.06□□□□□ -2.4
PSMA4-221ENST00000560842 TRGV10A0A0A0MS01 117 aa0.05□□□□□ -2.4
PSMA4-221ENST00000560842 TRAV4A0A0B4J268 109 aa0.05□□□□□ -2.4
PSMA4-221ENST00000560842 M0R378 163 aa0.05□□□□□ -2.4
PSMA4-221ENST00000560842 TCRBP04435 133 aa0.05□□□□□ -2.4
PSMA4-221ENST00000560842 AESQ08117 197 aa0.05□□□□□ -2.4
PSMA4-221ENST00000560842 C22orf39Q6P5X5 142 aa0.05□□□□□ -2.4
PSMA4-221ENST00000560842 C4orf22Q6V702 233 aa0.05□□□□□ -2.4
PSMA4-221ENST00000560842 PDZD9Q8IXQ8 264 aa0.05□□□□□ -2.4
PSMA4-221ENST00000560842 PSTPIP2Q9H939 334 aa0.05□□□□□ -2.4
PSMA4-221ENST00000560842 UCK1Q9HA47 277 aa0.05□□□□□ -2.4
PSMA4-221ENST00000560842 PARVBQ9HBI1 364 aa0.05□□□□□ -2.4
PSMA4-221ENST00000560842 PCTPQ9UKL6 214 aa0.05□□□□□ -2.4
PSMA4-221ENST00000560842 RFX7Q2KHR2 1363 aa0.05□□□□□ -2.4
PSMA4-221ENST00000560842 CCDC144AA2RUR9 1427 aa0.04□□□□□ -2.4
PSMA4-221ENST00000560842 A0A087WSZ3 146 aa0.04□□□□□ -2.4
PSMA4-221ENST00000560842 TRAV10A0A0B4J240 114 aa0.04□□□□□ -2.4
PSMA4-221ENST00000560842 RPP14O95059 124 aaKnown RBP0.04□□□□□ -2.4
PSMA4-221ENST00000560842 LYPLA2O95372 231 aa0.04□□□□□ -2.4
PSMA4-221ENST00000560842 SRP14P37108 136 aaKnown RBP0.04□□□□□ -2.4
PSMA4-221ENST00000560842 KRR1Q13601 381 aaKnown RBP0.04□□□□□ -2.4
PSMA4-221ENST00000560842 RRN3P1Q2M238 152 aa0.04□□□□□ -2.4
PSMA4-221ENST00000560842 LYRM7Q5U5X0 104 aa0.04□□□□□ -2.4
PSMA4-221ENST00000560842 EXOC3-AS1Q8N2X6 119 aa0.04□□□□□ -2.4
PSMA4-221ENST00000560842 OR10K1Q8NGX5 313 aa0.04□□□□□ -2.4
PSMA4-221ENST00000560842 STAG3L4Q8TBR4 150 aa0.04□□□□□ -2.4
PSMA4-221ENST00000560842 PSMF1Q92530 271 aa0.04□□□□□ -2.4
PSMA4-221ENST00000560842 ARL5BQ96KC2 179 aa0.04□□□□□ -2.4
PSMA4-221ENST00000560842 MYO18AQ92614 2054 aaKnown RBP0.03□□□□□ -2.4
PSMA4-221ENST00000560842 B4DSR2 109 aa0.03□□□□□ -2.4
PSMA4-221ENST00000560842 RPS17P08708 135 aaKnown RBP0.03□□□□□ -2.4
PSMA4-221ENST00000560842 PIGPP57054 158 aa0.03□□□□□ -2.4
PSMA4-221ENST00000560842 ATOH7Q8N100 152 aa0.03□□□□□ -2.4
PSMA4-221ENST00000560842 YPEL2Q96QA6 119 aa0.03□□□□□ -2.4
PSMA4-221ENST00000560842 ZFYVE9O95405 1425 aa0.03□□□□□ -2.41
PSMA4-221ENST00000560842 SYNE1Q8NF91 8797 aaKnown RBP0.03□□□□□ -2.41
PSMA4-221ENST00000560842 NDUFB3O43676 98 aa0.02□□□□□ -2.41
PSMA4-221ENST00000560842 CEBPGP53567 150 aa0.02□□□□□ -2.41
PSMA4-221ENST00000560842 CANT1Q8WVQ1 401 aa0.02□□□□□ -2.41
PSMA4-221ENST00000560842 TRBV19A0A075B6N1 114 aa0.01□□□□□ -2.41
PSMA4-221ENST00000560842 COX7CP15954 63 aa0.01□□□□□ -2.41
PSMA4-221ENST00000560842 DEFA3P59666 94 aa0.01□□□□□ -2.41
PSMA4-221ENST00000560842 RGS21Q2M5E4 152 aa0.01□□□□□ -2.41
PSMA4-221ENST00000560842 OR5D14Q8NGL3 314 aa0.01□□□□□ -2.41
PSMA4-221ENST00000560842 Q8TAT8 98 aa0.01□□□□□ -2.41
PSMA4-221ENST00000560842 ZC2HC1AQ96GY0 325 aa0.01□□□□□ -2.41
PSMA4-221ENST00000560842 SLC25A21Q9BQT8 299 aaPredicted RBP0.01□□□□□ -2.41
PSMA4-221ENST00000560842 CCDC94Q9BW85 323 aaPredicted RBP0.01□□□□□ -2.41
PSMA4-221ENST00000560842 LY96Q9Y6Y9 160 aa0.01□□□□□ -2.41
PSMA4-221ENST00000560842 SCN8AQ9UQD0 1980 aa0.01□□□□□ -2.41
PSMA4-221ENST00000560842 H3BRM9 83 aa0□□□□□ -2.41
PSMA4-221ENST00000560842 ERC2-IT1O76042 136 aa0□□□□□ -2.41
PSMA4-221ENST00000560842 CD2P06729 351 aa0□□□□□ -2.41
PSMA4-221ENST00000560842 SPINK7P58062 85 aa0□□□□□ -2.41
PSMA4-221ENST00000560842 GLIPR1L1Q6UWM5 242 aa0□□□□□ -2.41
PSMA4-221ENST00000560842 ASCC3Q8N3C0 2202 aaKnown RBP0□□□□□ -2.41
PSMA4-221ENST00000560842 GPR98Q8WXG9 6306 aa0□□□□□ -2.41
PSMA4-221ENST00000560842 PARVGQ9HBI0 331 aa0□□□□□ -2.41
PSMA4-221ENST00000560842 MEGF8Q7Z7M0 2845 aa-0□□□□□ -2.41
PSMA4-221ENST00000560842 MYLKQ15746 1914 aa-0.01□□□□□ -2.41
PSMA4-221ENST00000560842 F8W1H4 67 aa-0.01□□□□□ -2.41
PSMA4-221ENST00000560842 TEN1Q86WV5 123 aa-0.01□□□□□ -2.41
PSMA4-221ENST00000560842 OR10AC1Q8NH08 325 aa-0.01□□□□□ -2.41
PSMA4-221ENST00000560842 PRAP1Q96NZ9 151 aa-0.01□□□□□ -2.41
PSMA4-221ENST00000560842 HEATR1Q9H583 2144 aaKnown RBP-0.01□□□□□ -2.41
PSMA4-221ENST00000560842 PTPRFP10586 1907 aa-0.01□□□□□ -2.41
PSMA4-221ENST00000560842 OR7C1O76099 320 aaPredicted RBP-0.02□□□□□ -2.41
PSMA4-221ENST00000560842 IGLV1-51P01701 117 aa-0.02□□□□□ -2.41
PSMA4-221ENST00000560842 CXCL8P10145 99 aa-0.02□□□□□ -2.41
PSMA4-221ENST00000560842 CCL7P80098 99 aa-0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms