RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 HAX1O00165 279 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 CIDEAO60543 219 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 P01737 135 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 SCGB1A1P11684 91 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 IGLL1P15814 213 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 S100A7P31151 101 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 SSTR5P35346 364 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 FAM27E3Q08E93 113 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 RIGQ13278 110 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 TNXAQ16473 311 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 TMEM108Q6UXF1 575 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 TCF24Q7RTU0 167 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 ABHD12Q8N2K0 398 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 C5orf17Q8NAS9 161 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 NUP37Q8NFH4 326 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 NUP35Q8NFH5 326 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 OR10AG1Q8NH19 301 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 RCHY1Q96PM5 261 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 WNT10AQ9GZT5 417 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 CST9LQ9H4G1 147 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 CALYQ9NYX4 217 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 KLF12Q9Y4X4 402 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 YLPM1P49750 1951 aaKnown RBP6.94□□□□□ -1.3
CCDC33-209ENST00000560565 ARID1AO14497 2285 aa6.94□□□□□ -1.3
CCDC33-209ENST00000560565 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.93□□□□□ -1.3
CCDC33-209ENST00000560565 TRAV34A0A0B4J273 112 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 KBTBD11-OT1A0A1B0GTJ5 212 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 GAGE10A6NGK3 116 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 C2orf70A6NJV1 201 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 VSTM5A8MXK1 200 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 GGTLC3B5MD39 225 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 M0R1B8 84 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 CT45A6P0DMU7 189 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 CT45A5P0DMU8 189 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 CT45A7P0DMV0 189 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 CD40P25942 277 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 TCL1AP56279 114 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 FXYD3Q14802 87 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 SPINK9Q5DT21 86 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 KIAA2026Q5HYC2 2103 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 CT45A1Q5HYN5 189 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 BVES-AS1Q5T3Y7 98 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 UNQ5815/PRO19632Q6UWF5 114 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 SLC25A48Q6ZT89 311 aaKnown RBP6.93□□□□□ -1.3
CCDC33-209ENST00000560565 LYG1Q8N1E2 194 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 OR4X2Q8NGF9 303 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 CT45A3Q8NHU0 189 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 RNASE8Q8TDE3 154 aaKnown RBP6.93□□□□□ -1.3
CCDC33-209ENST00000560565 LRRC29Q8WV35 223 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 LINC00574Q9H8X3 128 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 IDI2-AS1Q9NZ38 188 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 ACANP16112 2415 aa6.93□□□□□ -1.3
CCDC33-209ENST00000560565 FLNAP21333 2647 aaKnown RBP6.93□□□□□ -1.3
CCDC33-209ENST00000560565 VPS13CQ709C8 3753 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 TEX50A0A1B0GTY4 177 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 SERTM2A0A1B0GWG4 89 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 TCRBV4S1A1TA0A5B7 111 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 HIGD1CA8MV81 97 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 H3BRM9 83 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 ACTL6BO94805 426 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 IGLV2-8P01709 118 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 IGHV3-13P01766 116 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 CT45A10P0DMU9 189 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 CD33P20138 364 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 GPR183P32249 361 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 RPS16P62249 146 aaKnown RBP6.92□□□□□ -1.3
CCDC33-209ENST00000560565 SLAQ13239 276 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 EDDM3AQ14507 147 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 RNF151Q2KHN1 245 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 KIAA1644Q3SXP7 199 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 ZNF329Q86UD4 541 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 THAP8Q8NA92 274 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 OR2T6Q8NHC8 308 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 UBALD1Q8TB05 177 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 H1FXQ92522 213 aaKnown RBP6.92□□□□□ -1.3
CCDC33-209ENST00000560565 NUDT11Q96G61 164 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 MDFIQ99750 246 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 CSTL1Q9H114 145 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 SCRT2Q9NQ03 307 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 ZNF355PQ9NSJ1 428 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 EPDR1Q9UM22 224 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 CHTOPQ9Y3Y2 248 aaKnown RBP6.92□□□□□ -1.3
CCDC33-209ENST00000560565 DSCAMO60469 2012 aa6.92□□□□□ -1.3
CCDC33-209ENST00000560565 PRRC2AP48634 2157 aaKnown RBP6.92□□□□□ -1.3
CCDC33-209ENST00000560565 IGLV3-9A0A075B6K5 115 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 LOC105371242A0A075B767 164 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 IGHV3-43A0A0B4J1X8 118 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 hADV38S2A0JD32 116 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 CBY3A6NI87 242 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 F2Z2F3 143 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 ZNF207O43670 478 aaKnown RBP6.91□□□□□ -1.3
CCDC33-209ENST00000560565 SPINK4O60575 86 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 FOXH1O75593 365 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 GOSR1O95249 250 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 NUDT3O95989 172 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 IGHV3-43DP0DP04 118 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 COX8AP10176 69 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 FOXA3P55318 350 aaPredicted RBP6.91□□□□□ -1.3
CCDC33-209ENST00000560565 LOXL3P58215 753 aa6.91□□□□□ -1.3
CCDC33-209ENST00000560565 PAX2Q02962 417 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms