RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 IL4P05112 153 aa7.12□□□□□ -1.27
HERC1-206ENST00000559996 CSN3P07498 182 aa7.12□□□□□ -1.27
HERC1-206ENST00000559996 TPT1P13693 172 aaKnown RBP7.12□□□□□ -1.27
HERC1-206ENST00000559996 ZP3P21754 424 aa7.12□□□□□ -1.27
HERC1-206ENST00000559996 SYNJ2BPP57105 145 aa7.12□□□□□ -1.27
HERC1-206ENST00000559996 ZNF726P1Q15940 193 aa7.12□□□□□ -1.27
HERC1-206ENST00000559996 RPEL1Q2QD12 228 aa7.12□□□□□ -1.27
HERC1-206ENST00000559996 FFAR4Q5NUL3 377 aa7.12□□□□□ -1.27
HERC1-206ENST00000559996 SPATA31B1PQ5VZV4 182 aa7.12□□□□□ -1.27
HERC1-206ENST00000559996 SHISA2Q6UWI4 295 aa7.12□□□□□ -1.27
HERC1-206ENST00000559996 SSX7Q7RTT5 188 aa7.12□□□□□ -1.27
HERC1-206ENST00000559996 C1QL4Q86Z23 238 aa7.12□□□□□ -1.27
HERC1-206ENST00000559996 C3orf56Q8N813 242 aa7.12□□□□□ -1.27
HERC1-206ENST00000559996 LINC00482Q8N8I6 264 aa7.12□□□□□ -1.27
HERC1-206ENST00000559996 GNPNAT1Q96EK6 184 aaPredicted RBP7.12□□□□□ -1.27
HERC1-206ENST00000559996 SEPSECSQ9HD40 501 aaKnown RBP7.12□□□□□ -1.27
HERC1-206ENST00000559996 DNAJC4Q9NNZ3 241 aa7.12□□□□□ -1.27
HERC1-206ENST00000559996 RPRMQ9NS64 109 aa7.12□□□□□ -1.27
HERC1-206ENST00000559996 STAB1Q9NY15 2570 aa7.12□□□□□ -1.27
HERC1-206ENST00000559996 TRAV5A0A0B4J249 113 aa7.11□□□□□ -1.27
HERC1-206ENST00000559996 C17orf112F2Z3M2 114 aa7.11□□□□□ -1.27
HERC1-206ENST00000559996 MRPS12O15235 138 aaKnown RBP7.11□□□□□ -1.27
HERC1-206ENST00000559996 ZNF207O43670 478 aaKnown RBP7.11□□□□□ -1.27
HERC1-206ENST00000559996 BUB3O43684 328 aa7.11□□□□□ -1.27
HERC1-206ENST00000559996 EIF3GO75821 320 aaKnown RBP eCLIP7.11□□□□□ -1.27
HERC1-206ENST00000559996 TSPAN15O95858 294 aa7.11□□□□□ -1.27
HERC1-206ENST00000559996 OR5G3P0C626 314 aa7.11□□□□□ -1.27
HERC1-206ENST00000559996 ORM2P19652 201 aa7.11□□□□□ -1.27
HERC1-206ENST00000559996 M6PRP20645 277 aa7.11□□□□□ -1.27
HERC1-206ENST00000559996 FHITP49789 147 aa7.11□□□□□ -1.27
HERC1-206ENST00000559996 RAB2AP61019 212 aa7.11□□□□□ -1.27
HERC1-206ENST00000559996 RAB31Q13636 194 aa7.11□□□□□ -1.27
HERC1-206ENST00000559996 FAM106AQ4KMX7 169 aa7.11□□□□□ -1.27
HERC1-206ENST00000559996 TEX261Q6UWH6 196 aa7.11□□□□□ -1.27
HERC1-206ENST00000559996 WFDC9Q8NEX5 89 aa7.11□□□□□ -1.27
HERC1-206ENST00000559996 TMED6Q8WW62 240 aa7.11□□□□□ -1.27
HERC1-206ENST00000559996 DPF1Q92782 380 aa7.11□□□□□ -1.27
HERC1-206ENST00000559996 ZNF503Q96F45 646 aa7.11□□□□□ -1.27
HERC1-206ENST00000559996 FAM167A-AS1Q96KT0 104 aa7.11□□□□□ -1.27
HERC1-206ENST00000559996 UHRF2Q96PU4 802 aa7.11□□□□□ -1.27
HERC1-206ENST00000559996 SLC25A39Q9BZJ4 359 aaPredicted RBP7.11□□□□□ -1.27
HERC1-206ENST00000559996 DOK5Q9P104 306 aa7.11□□□□□ -1.27
HERC1-206ENST00000559996 WNK1Q9H4A3 2382 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 ZNF320A2RRD8 509 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 C2orf70A6NJV1 201 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 SEC14L6B5MCN3 397 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 H3BRN7 92 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 CHEK1O14757 476 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 HYPMO75409 117 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 SULT1A2P50226 295 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 ELLP55199 621 aaPredicted RBP7.1□□□□□ -1.27
HERC1-206ENST00000559996 LYZP61626 148 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 EIF5AP63241 154 aaKnown RBP7.1□□□□□ -1.27
HERC1-206ENST00000559996 PXDC1Q5TGL8 231 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 ALKAL2Q6UX46 152 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 Q6ZRG5 221 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 ZNF709Q8N972 641 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 ZNF680Q8NEM1 530 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 OR9G4Q8NGQ1 327 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 OR1B1Q8NGR6 318 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 GATAD1Q8WUU5 269 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 PHYHIPLQ96FC7 376 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 SMPXQ9UHP9 88 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 SMAD5-AS1Q9Y6J3 95 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 VWFP04275 2813 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 CMYA5Q8N3K9 4069 aa7.1□□□□□ -1.27
HERC1-206ENST00000559996 ANK2Q01484 3957 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 IGHV3-49A0A0A0MS15 119 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 IGHV7-4-1A0A0J9YVY3 117 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 ZNF98A6NK75 572 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 FABP1P07148 127 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 C4BPBP20851 252 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 CBLN1P23435 193 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 NPPCP23582 126 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 ACOT6Q3I5F7 207 aaPredicted RBP7.09□□□□□ -1.27
HERC1-206ENST00000559996 TMEM41BQ5BJD5 291 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 FAM74A1Q5RGS3 127 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 FAM90A2PQ658T7 463 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 LEMD1Q68G75 181 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 C16orf54Q6UWD8 224 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 MIR17HGQ75NE6 70 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 LINC00305Q7Z4B0 112 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 OR10G4Q8NGN3 311 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 OR10G9Q8NGN4 311 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 OR10G7Q8NGN6 311 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 SHANK2-AS3Q9BTD1 123 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 C20orf24Q9BUV8 137 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 PBDC1Q9BVG4 233 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 SLC25A2Q9BXI2 301 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 DAZ1Q9NQZ3 744 aaKnown RBP7.09□□□□□ -1.27
HERC1-206ENST00000559996 SIGLEC8Q9NYZ4 499 aa7.09□□□□□ -1.27
HERC1-206ENST00000559996 TECRQ9NZ01 308 aaKnown RBP7.09□□□□□ -1.27
HERC1-206ENST00000559996 IGHV3OR16-13A0A075B7E8 117 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 IGHV3-74A0A0B4J1X5 117 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 IGHV3-66A0A0C4DH42 116 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 OVOL1O14753 267 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 SCGB2A1O75556 95 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 FOLR2P14207 255 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 FAM78BQ5VT40 261 aa7.08□□□□□ -1.28
HERC1-206ENST00000559996 C10orf113Q5VZT2 155 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms