RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 ZNF343Q6P1L6 599 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 CYP2G1PQ6ZSU1 146 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 TMEM144Q7Z5S9 345 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 RNF152Q8N8N0 203 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 THAP8Q8NA92 274 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 TMEM116Q8NCL8 245 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 OR51G1Q8NGK1 321 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 OR1L6Q8NGR2 347 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 VN1R17PQ8TDU5 208 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 CACNG8Q8WXS5 425 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 CXorf58Q96LI9 332 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 UHRF2Q96PU4 802 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 GINS3Q9BRX5 216 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 PBDC1Q9BVG4 233 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 SLA2Q9H6Q3 261 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 PUS1Q9Y606 427 aaKnown RBP eCLIP3.99□□□□□ -1.77
SPG11-220ENST00000559933 PXMP4Q9Y6I8 212 aa3.99□□□□□ -1.77
SPG11-220ENST00000559933 ANK2Q01484 3957 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 STAB1Q9NY15 2570 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 VWFP04275 2813 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 TRBV7-1A0A0A6YYK4 115 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 BORCS7-ASMTA0A0B4J1R7 106 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 TRAV5A0A0B4J249 113 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 DFFBO76075 338 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 LY86O95711 162 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 APOHP02749 345 aaPredicted RBP3.98□□□□□ -1.77
SPG11-220ENST00000559933 IL4P05112 153 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 SPP1P10451 314 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 PSG1P11464 419 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 TPT1P13693 172 aaKnown RBP3.98□□□□□ -1.77
SPG11-220ENST00000559933 ORM2P19652 201 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 HOXD3P31249 432 aaPredicted RBP3.98□□□□□ -1.77
SPG11-220ENST00000559933 NPBWR1P48145 328 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 ATP5IP56385 69 aaPredicted RBP3.98□□□□□ -1.77
SPG11-220ENST00000559933 SYNJ2BPP57105 145 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 B2MP61769 119 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 ZNF616Q08AN1 781 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 ZNF726P1Q15940 193 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 ATP6V1FQ16864 119 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 ETFRF1Q6IPR1 90 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 FAM122CQ6P4D5 195 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 TOMM20LQ6UXN7 152 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 PATE2Q6UY27 113 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 SLC51BQ86UW2 128 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 BAP18Q8IXM2 172 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 OR11H1Q8NG94 326 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 OR1B1Q8NGR6 318 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 OR2G3Q8NGZ4 309 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 STOML3Q8TAV4 291 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 SCGB1C1Q8TD33 95 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 C4orf3Q8WVX3 66 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 USMG5Q96IX5 58 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 UBE2E2Q96LR5 201 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 TRGV9Q99603 122 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 CITED1Q99966 193 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 C20orf24Q9BUV8 137 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 GON7Q9BXV9 100 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 ARV1Q9H2C2 271 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 SLC25A22Q9H936 323 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 NPVFQ9HCQ7 196 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 THYN1Q9P016 225 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 PEF1Q9UBV8 284 aaKnown RBP3.98□□□□□ -1.77
SPG11-220ENST00000559933 SLC45A2Q9UMX9 530 aa3.98□□□□□ -1.77
SPG11-220ENST00000559933 WNK1Q9H4A3 2382 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 TRRAPQ9Y4A5 3859 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 A0A0G2JLM5 398 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 WI2-2373I1.2A0A1W2PRP0 233 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 FNDC10F2Z333 226 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 H3BTX0 84 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 TAAR5O14804 337 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 NUPL2O15504 423 aaKnown RBP3.97□□□□□ -1.77
SPG11-220ENST00000559933 CYB5BO43169 146 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 JTBO76095 146 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 SCAF4O95104 1147 aaKnown RBP3.97□□□□□ -1.77
SPG11-220ENST00000559933 BRI3O95415 125 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 TOMM40O96008 361 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 HSPB1P04792 205 aaKnown RBP3.97□□□□□ -1.77
SPG11-220ENST00000559933 RD3LP0DJH9 198 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 ZNF266Q14584 549 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 RPEL1Q2QD12 228 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 MIR17HGQ75NE6 70 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 COMMD1Q8N668 190 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 OR1N2Q8NGR9 330 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 FAM213BQ8TBF2 198 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 TMEM37Q8WXS4 190 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 DLX4Q92988 240 aaPredicted RBP3.97□□□□□ -1.77
SPG11-220ENST00000559933 PPP1R14BQ96C90 147 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 GGACTQ9BVM4 153 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 SCRT1Q9BWW7 348 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 PARD6GQ9BYG4 376 aaPredicted RBP3.97□□□□□ -1.77
SPG11-220ENST00000559933 SLC39A9Q9NUM3 307 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 TSSC4Q9Y5U2 329 aaPredicted RBP3.97□□□□□ -1.77
SPG11-220ENST00000559933 COL6A5A8TX70 2615 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 CMYA5Q8N3K9 4069 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 NOTCH1P46531 2555 aa3.97□□□□□ -1.77
SPG11-220ENST00000559933 ZNF320A2RRD8 509 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 C17orf112F2Z3M2 114 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 LINC01619G3V211 115 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 CCL24O00175 119 aa3.96□□□□□ -1.78
SPG11-220ENST00000559933 COX7A2P2O60397 106 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms