RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 HBE1P02100 147 aa9.37□□□□□ -0.91
HERC1-205ENST00000559886 STAG3L2P0CL84 134 aa9.37□□□□□ -0.91
HERC1-205ENST00000559886 STAG3L3P0CL85 134 aa9.37□□□□□ -0.91
HERC1-205ENST00000559886 MORN5Q5VZ52 161 aa9.37□□□□□ -0.91
HERC1-205ENST00000559886 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.37□□□□□ -0.91
HERC1-205ENST00000559886 TEX46H3BTG2 121 aa9.36□□□□□ -0.91
HERC1-205ENST00000559886 KHDC1LQ5JSQ8 128 aa9.36□□□□□ -0.91
HERC1-205ENST00000559886 C18orf65Q6ZTR6 163 aa9.36□□□□□ -0.91
HERC1-205ENST00000559886 SLC25A39Q9BZJ4 359 aaPredicted RBP9.36□□□□□ -0.91
HERC1-205ENST00000559886 MED9Q9NWA0 146 aa9.36□□□□□ -0.91
HERC1-205ENST00000559886 A0A1B0GV50 99 aa9.36□□□□□ -0.91
HERC1-205ENST00000559886 HSPB1P04792 205 aaKnown RBP9.36□□□□□ -0.91
HERC1-205ENST00000559886 C8orf88P0DMB2 117 aa9.36□□□□□ -0.91
HERC1-205ENST00000559886 FGF8P55075 233 aaPredicted RBP9.36□□□□□ -0.91
HERC1-205ENST00000559886 C11orf44Q8N8P7 122 aa9.36□□□□□ -0.91
HERC1-205ENST00000559886 TECRQ9NZ01 308 aaKnown RBP9.36□□□□□ -0.91
HERC1-205ENST00000559886 IGHV3OR16-8A0A075B7F1 116 aa9.35□□□□□ -0.91
HERC1-205ENST00000559886 TAS2R45P59539 299 aa9.35□□□□□ -0.91
HERC1-205ENST00000559886 CCL20P78556 96 aa9.35□□□□□ -0.91
HERC1-205ENST00000559886 GPHB5Q86YW7 130 aa9.35□□□□□ -0.91
HERC1-205ENST00000559886 FAM167A-AS1Q96KT0 104 aa9.35□□□□□ -0.91
HERC1-205ENST00000559886 CITED2Q99967 270 aaPredicted RBP9.35□□□□□ -0.91
HERC1-205ENST00000559886 SHANK2-AS3Q9BTD1 123 aa9.35□□□□□ -0.91
HERC1-205ENST00000559886 RABAC1Q9UI14 185 aa9.35□□□□□ -0.91
HERC1-205ENST00000559886 IGHV4OR15-8A0A075B7B6 117 aa9.34□□□□□ -0.91
HERC1-205ENST00000559886 A0A087WW49 117 aa9.34□□□□□ -0.91
HERC1-205ENST00000559886 TRAV5A0A0B4J249 113 aa9.34□□□□□ -0.91
HERC1-205ENST00000559886 H3BRN7 92 aa9.34□□□□□ -0.91
HERC1-205ENST00000559886 CXorf1O96002 111 aa9.34□□□□□ -0.91
HERC1-205ENST00000559886 ARL14EPLP0DKL9 152 aa9.34□□□□□ -0.91
HERC1-205ENST00000559886 FOXL1Q12952 345 aa9.34□□□□□ -0.91
HERC1-205ENST00000559886 NDUFA5Q16718 116 aa9.34□□□□□ -0.91
HERC1-205ENST00000559886 UNQ9165/PRO28630Q6UXU0 137 aa9.34□□□□□ -0.91
HERC1-205ENST00000559886 S100A7AQ86SG5 101 aa9.34□□□□□ -0.91
HERC1-205ENST00000559886 KLHL30-AS1Q8NEE0 82 aa9.34□□□□□ -0.91
HERC1-205ENST00000559886 SLC25A2Q9BXI2 301 aa9.34□□□□□ -0.91
HERC1-205ENST00000559886 TSSC4Q9Y5U2 329 aaPredicted RBP9.34□□□□□ -0.91
HERC1-205ENST00000559886 RPEL1Q2QD12 228 aa9.34□□□□□ -0.91
HERC1-205ENST00000559886 KHDC3LQ587J8 217 aa9.34□□□□□ -0.91
HERC1-205ENST00000559886 HIST2H2BDQ6DRA6 164 aa9.34□□□□□ -0.91
HERC1-205ENST00000559886 TMEM190Q8WZ59 177 aa9.34□□□□□ -0.91
HERC1-205ENST00000559886 SCRT1Q9BWW7 348 aa9.34□□□□□ -0.91
HERC1-205ENST00000559886 PFDN2Q9UHV9 154 aa9.34□□□□□ -0.91
HERC1-205ENST00000559886 NUDT19A8MXV4 375 aa9.33□□□□□ -0.92
HERC1-205ENST00000559886 FAM106AQ4KMX7 169 aa9.33□□□□□ -0.92
HERC1-205ENST00000559886 IL34Q6ZMJ4 242 aa9.33□□□□□ -0.92
HERC1-205ENST00000559886 PQLC2Q6ZP29 291 aa9.33□□□□□ -0.92
HERC1-205ENST00000559886 MARC2Q969Z3 335 aa9.33□□□□□ -0.92
HERC1-205ENST00000559886 ZNF503Q96F45 646 aa9.33□□□□□ -0.92
HERC1-205ENST00000559886 C20orf24Q9BUV8 137 aa9.33□□□□□ -0.92
HERC1-205ENST00000559886 ZNF98A6NK75 572 aa9.33□□□□□ -0.92
HERC1-205ENST00000559886 S100A7P31151 101 aa9.33□□□□□ -0.92
HERC1-205ENST00000559886 KRTAP10-3P60369 221 aa9.33□□□□□ -0.92
HERC1-205ENST00000559886 PMS2P11Q13670 270 aa9.33□□□□□ -0.92
HERC1-205ENST00000559886 DEFB136Q30KP8 78 aa9.33□□□□□ -0.92
HERC1-205ENST00000559886 LEMD1Q68G75 181 aa9.33□□□□□ -0.92
HERC1-205ENST00000559886 METTL26Q96S19 204 aa9.33□□□□□ -0.92
HERC1-205ENST00000559886 TMPRSS5Q9H3S3 457 aa9.33□□□□□ -0.92
HERC1-205ENST00000559886 ZP3P21754 424 aa9.32□□□□□ -0.92
HERC1-205ENST00000559886 NPPCP23582 126 aa9.32□□□□□ -0.92
HERC1-205ENST00000559886 CRYBB3P26998 211 aa9.32□□□□□ -0.92
HERC1-205ENST00000559886 GCHFRP30047 84 aa9.32□□□□□ -0.92
HERC1-205ENST00000559886 HOXD3P31249 432 aaPredicted RBP9.32□□□□□ -0.92
HERC1-205ENST00000559886 C8orf86Q6ZUL3 223 aa9.32□□□□□ -0.92
HERC1-205ENST00000559886 U3KQE9 123 aa9.32□□□□□ -0.92
HERC1-205ENST00000559886 ZNF320A2RRD8 509 aa9.32□□□□□ -0.92
HERC1-205ENST00000559886 LINC01619G3V211 115 aa9.32□□□□□ -0.92
HERC1-205ENST00000559886 OR7C2O60412 319 aa9.32□□□□□ -0.92
HERC1-205ENST00000559886 PSMB3P49720 205 aa9.32□□□□□ -0.92
HERC1-205ENST00000559886 COMMD7Q86VX2 200 aa9.32□□□□□ -0.92
HERC1-205ENST00000559886 PRIMA1Q86XR5 153 aa9.32□□□□□ -0.92
HERC1-205ENST00000559886 SLC7A5P1Q8MH63 180 aa9.32□□□□□ -0.92
HERC1-205ENST00000559886 STXBP6Q8NFX7 210 aa9.32□□□□□ -0.92
HERC1-205ENST00000559886 OR11H1Q8NG94 326 aa9.32□□□□□ -0.92
HERC1-205ENST00000559886 OR1N2Q8NGR9 330 aa9.32□□□□□ -0.92
HERC1-205ENST00000559886 RNF24Q9Y225 148 aa9.32□□□□□ -0.92
HERC1-205ENST00000559886 ATRQ13535 2644 aa9.32□□□□□ -0.92
HERC1-205ENST00000559886 ZNF207O43670 478 aaKnown RBP9.31□□□□□ -0.92
HERC1-205ENST00000559886 IQCF2Q8IXL9 164 aa9.31□□□□□ -0.92
HERC1-205ENST00000559886 DPF1Q92782 380 aa9.31□□□□□ -0.92
HERC1-205ENST00000559886 FAM210AQ96ND0 272 aa9.31□□□□□ -0.92
HERC1-205ENST00000559886 PAXXQ9BUH6 204 aa9.31□□□□□ -0.92
HERC1-205ENST00000559886 OR51M1Q9H341 326 aa9.31□□□□□ -0.92
HERC1-205ENST00000559886 A0A1W2PRX2 142 aa9.31□□□□□ -0.92
HERC1-205ENST00000559886 RAB19A4D1S5 217 aa9.31□□□□□ -0.92
HERC1-205ENST00000559886 ADARB2-AS1A8MUL3 147 aa9.31□□□□□ -0.92
HERC1-205ENST00000559886 K7EMT4 169 aa9.31□□□□□ -0.92
HERC1-205ENST00000559886 LGALS9O00182 355 aa9.31□□□□□ -0.92
HERC1-205ENST00000559886 BUB3O43684 328 aa9.31□□□□□ -0.92
HERC1-205ENST00000559886 KLF5Q13887 457 aaPredicted RBP9.31□□□□□ -0.92
HERC1-205ENST00000559886 REC114Q7Z4M0 266 aa9.31□□□□□ -0.92
HERC1-205ENST00000559886 SUN5Q8TC36 379 aa9.31□□□□□ -0.92
HERC1-205ENST00000559886 DAZ1Q9NQZ3 744 aaKnown RBP9.31□□□□□ -0.92
HERC1-205ENST00000559886 TMEM14CQ9P0S9 112 aa9.31□□□□□ -0.92
HERC1-205ENST00000559886 GNG13Q9P2W3 67 aa9.31□□□□□ -0.92
HERC1-205ENST00000559886 APOHP02749 345 aaPredicted RBP9.3□□□□□ -0.92
HERC1-205ENST00000559886 PYYP10082 97 aa9.3□□□□□ -0.92
HERC1-205ENST00000559886 GP9P14770 177 aa9.3□□□□□ -0.92
HERC1-205ENST00000559886 KRTAP24-1Q3LI83 254 aa9.3□□□□□ -0.92
HERC1-205ENST00000559886 AWAT1Q58HT5 328 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms