RNA–Protein interactions for RNA: ENST00000559834.1

HDDC3-204, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,076 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-204ENST00000559834 RAB2BQ8WUD1 216 aa6.53□□□□□ -1.36
HDDC3-204ENST00000559834 SLC35E1Q96K37 410 aa6.53□□□□□ -1.36
HDDC3-204ENST00000559834 WDR12Q9GZL7 423 aaKnown RBP6.53□□□□□ -1.36
HDDC3-204ENST00000559834 MAGT1Q9H0U3 335 aa6.53□□□□□ -1.36
HDDC3-204ENST00000559834 HSPB7Q9UBY9 170 aa6.53□□□□□ -1.36
HDDC3-204ENST00000559834 SHPKQ9UHJ6 478 aa6.53□□□□□ -1.36
HDDC3-204ENST00000559834 SCP2D1Q9UJQ7 156 aa6.53□□□□□ -1.36
HDDC3-204ENST00000559834 TMED3Q9Y3Q3 217 aa6.53□□□□□ -1.36
HDDC3-204ENST00000559834 HERC2O95714 4834 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 LOC102723971A0A1B0GUV8 181 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 CFDP00746 253 aaPredicted RBP6.52□□□□□ -1.37
HDDC3-204ENST00000559834 ANXA3P12429 323 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 AKR1C4P17516 323 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 PAX9P55771 341 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 LYZP61626 148 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 DAD1P61803 113 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 RAB11AP62491 216 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 ZNF90Q03938 601 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 GAMTQ14353 236 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 CTF1Q16619 201 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 FAM78BQ5VT40 261 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 GGNBP1Q5YKI7 109 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 FAAP20Q6NZ36 180 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 C1orf158Q8N1D5 194 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 ZNF709Q8N972 641 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 C15orf53Q8NAA6 179 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 SMIM4Q8WVI0 70 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 C16orf92Q96LL3 132 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 TMEM208Q9BTX3 173 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 SLC35B3Q9H1N7 401 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 RBKSQ9H477 322 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 RPRMQ9NS64 109 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 PLA2G2EQ9NZK7 142 aa6.52□□□□□ -1.37
HDDC3-204ENST00000559834 YTHDF2Q9Y5A9 579 aaKnown RBP6.52□□□□□ -1.37
HDDC3-204ENST00000559834 A0A0J9YX75 114 aa6.51□□□□□ -1.37
HDDC3-204ENST00000559834 SOCS3O14543 225 aa6.51□□□□□ -1.37
HDDC3-204ENST00000559834 CTDSPLO15194 276 aa6.51□□□□□ -1.37
HDDC3-204ENST00000559834 GALR1P47211 349 aa6.51□□□□□ -1.37
HDDC3-204ENST00000559834 DEFB1P60022 68 aa6.51□□□□□ -1.37
HDDC3-204ENST00000559834 B2MP61769 119 aa6.51□□□□□ -1.37
HDDC3-204ENST00000559834 RPP30P78346 268 aaKnown RBP6.51□□□□□ -1.37
HDDC3-204ENST00000559834 SRPXP78539 464 aa6.51□□□□□ -1.37
HDDC3-204ENST00000559834 SPCS2Q15005 226 aa6.51□□□□□ -1.37
HDDC3-204ENST00000559834 LYZL2Q7Z4W2 148 aa6.51□□□□□ -1.37
HDDC3-204ENST00000559834 OR51S1Q8NGJ8 323 aa6.51□□□□□ -1.37
HDDC3-204ENST00000559834 OR4C16Q8NGL9 310 aa6.51□□□□□ -1.37
HDDC3-204ENST00000559834 OR1S1Q8NH92 325 aa6.51□□□□□ -1.37
HDDC3-204ENST00000559834 TRGV9Q99603 122 aa6.51□□□□□ -1.37
HDDC3-204ENST00000559834 ATG101Q9BSB4 218 aa6.51□□□□□ -1.37
HDDC3-204ENST00000559834 DOK5Q9P104 306 aa6.51□□□□□ -1.37
HDDC3-204ENST00000559834 PCLOQ9Y6V0 5065 aa6.51□□□□□ -1.37
HDDC3-204ENST00000559834 KIAA1109Q2LD37 5005 aa6.5□□□□□ -1.37
HDDC3-204ENST00000559834 IGKV1D-37A0A075B6S9 117 aa6.5□□□□□ -1.37
HDDC3-204ENST00000559834 F6UB75 175 aa6.5□□□□□ -1.37
HDDC3-204ENST00000559834 CTDSP2O14595 271 aa6.5□□□□□ -1.37
HDDC3-204ENST00000559834 MED6O75586 246 aa6.5□□□□□ -1.37
HDDC3-204ENST00000559834 DUSP14O95147 198 aaKnown RBP6.5□□□□□ -1.37
HDDC3-204ENST00000559834 OR2F1Q13607 317 aa6.5□□□□□ -1.37
HDDC3-204ENST00000559834 IL18Q14116 193 aa6.5□□□□□ -1.37
HDDC3-204ENST00000559834 TMEM88Q6PEY1 159 aa6.5□□□□□ -1.37
HDDC3-204ENST00000559834 DIRAS2Q96HU8 199 aa6.5□□□□□ -1.37
HDDC3-204ENST00000559834 IGF2BP2-AS1Q96M15 143 aa6.5□□□□□ -1.37
HDDC3-204ENST00000559834 GPR82Q96P67 336 aa6.5□□□□□ -1.37
HDDC3-204ENST00000559834 BCL7BQ9BQE9 202 aa6.5□□□□□ -1.37
HDDC3-204ENST00000559834 MIXL1Q9H2W2 232 aa6.5□□□□□ -1.37
HDDC3-204ENST00000559834 PAIP2BQ9ULR5 123 aaKnown RBP6.5□□□□□ -1.37
HDDC3-204ENST00000559834 SLC45A2Q9UMX9 530 aa6.5□□□□□ -1.37
HDDC3-204ENST00000559834 DNAH10Q8IVF4 4471 aa6.49□□□□□ -1.37
HDDC3-204ENST00000559834 hCG_2014768A0A024R1R8 64 aa6.49□□□□□ -1.37
HDDC3-204ENST00000559834 LYRM9A8MSI8 78 aa6.49□□□□□ -1.37
HDDC3-204ENST00000559834 OR4D5Q8NGN0 318 aa6.49□□□□□ -1.37
HDDC3-204ENST00000559834 OR1B1Q8NGR6 318 aa6.49□□□□□ -1.37
HDDC3-204ENST00000559834 CIB3Q96Q77 187 aaPredicted RBP6.49□□□□□ -1.37
HDDC3-204ENST00000559834 RSG1Q9BU20 258 aa6.49□□□□□ -1.37
HDDC3-204ENST00000559834 SLC25A22Q9H936 323 aa6.49□□□□□ -1.37
HDDC3-204ENST00000559834 MCUBQ9NWR8 336 aa6.49□□□□□ -1.37
HDDC3-204ENST00000559834 PRR13Q9NZ81 148 aa6.49□□□□□ -1.37
HDDC3-204ENST00000559834 DUXBA0A1W2PPF3 345 aa6.48□□□□□ -1.37
HDDC3-204ENST00000559834 ANKRD20A5PA0PJZ0 165 aa6.48□□□□□ -1.37
HDDC3-204ENST00000559834 ZNF98A6NK75 572 aa6.48□□□□□ -1.37
HDDC3-204ENST00000559834 A8MTW9 85 aa6.48□□□□□ -1.37
HDDC3-204ENST00000559834 SLC25A6P12236 298 aa6.48□□□□□ -1.37
HDDC3-204ENST00000559834 TSPOP30536 169 aa6.48□□□□□ -1.37
HDDC3-204ENST00000559834 CCL18P55774 89 aa6.48□□□□□ -1.37
HDDC3-204ENST00000559834 ZNF575Q86XF7 245 aa6.48□□□□□ -1.37
HDDC3-204ENST00000559834 THAP8Q8NA92 274 aa6.48□□□□□ -1.37
HDDC3-204ENST00000559834 BPIFCQ8NFQ6 507 aa6.48□□□□□ -1.37
HDDC3-204ENST00000559834 TMEM147Q9BVK8 224 aa6.48□□□□□ -1.37
HDDC3-204ENST00000559834 VPS13DQ5THJ4 4388 aa6.47□□□□□ -1.37
HDDC3-204ENST00000559834 ZNF705GA8MUZ8 300 aaPredicted RBP6.47□□□□□ -1.37
HDDC3-204ENST00000559834 C16orf90A8MZG2 172 aa6.47□□□□□ -1.37
HDDC3-204ENST00000559834 F5H768 121 aa6.47□□□□□ -1.37
HDDC3-204ENST00000559834 PITX3O75364 302 aa6.47□□□□□ -1.37
HDDC3-204ENST00000559834 INSP01308 110 aa6.47□□□□□ -1.37
HDDC3-204ENST00000559834 DEFB130BP0DP73 79 aa6.47□□□□□ -1.37
HDDC3-204ENST00000559834 DEFB130AP0DP74 79 aa6.47□□□□□ -1.37
HDDC3-204ENST00000559834 ORM2P19652 201 aa6.47□□□□□ -1.37
HDDC3-204ENST00000559834 FAUP35544 74 aaKnown RBP6.47□□□□□ -1.37
HDDC3-204ENST00000559834 AMTNQ6UX39 209 aa6.47□□□□□ -1.37
HDDC3-204ENST00000559834 S100A7AQ86SG5 101 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms