RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 SLIT2O94813 1529 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 SCN8AQ9UQD0 1980 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 MUC21A0A0G2JKD1 596 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 TRBV7-6A0A0J9YX20 115 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 MUC21A0A140T8X8 626 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 OR51F1A6NGY5 319 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 SDCBPO00560 298 aaPredicted RBP1.87□□□□□ -2.11
SPG11-218ENST00000559754 CTSGP08311 255 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 DEFA4P12838 97 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 HLA-EP13747 358 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 SDC2P34741 201 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 AQP4P55087 323 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 PDZD9Q8IXQ8 264 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 OR4E2Q8NGC2 313 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 OR8J3Q8NGG0 315 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 LXNQ9BS40 222 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 PRADC1Q9BSG0 188 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 NPCDR1Q9BY65 106 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 NDUFB11Q9NX14 153 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 COPZ2Q9P299 210 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 HSPB8Q9UJY1 196 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 RNF11Q9Y3C5 154 aa1.87□□□□□ -2.11
SPG11-218ENST00000559754 FANCMQ8IYD8 2048 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 BICRAQ9NZM4 1560 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 IGLV10-54A0A075B6I4 117 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 IGHV1-58A0A0C4DH39 117 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 ODAMA1E959 279 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 NDUFA2O43678 99 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 HIST1H2BKO60814 126 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 LYZL6O75951 148 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 HIST1H2BJP06899 126 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 CXCL1P09341 107 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 RPL35P42766 123 aaKnown RBP1.86□□□□□ -2.11
SPG11-218ENST00000559754 TMBIM6P55061 237 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 ARPP19P56211 112 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 NDUFA6P56556 154 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 DYNLT1P63172 113 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 HBBP68871 147 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 SLC38A11Q08AI6 406 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 MSMO1Q15800 293 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 VMA21Q3ZAQ7 101 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 EIF5AL1Q6IS14 154 aaKnown RBP1.86□□□□□ -2.11
SPG11-218ENST00000559754 LCN15Q6UWW0 184 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 C3orf56Q8N813 242 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 SLC30A7Q8NEW0 376 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 PFDN5Q99471 154 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 LINC00467Q9BRT7 94 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 TPT1P8Q9HAU6 139 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 HS3ST2Q9Y278 367 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 SHROOM3Q8TF72 1996 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 A2MP01023 1474 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 NISCHQ9Y2I1 1504 aa1.86□□□□□ -2.11
SPG11-218ENST00000559754 SMARCA4P51532 1647 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 IGKV2-24A0A0C4DH68 120 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 C9JAW5 83 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 J3QQQ9 107 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 DPM2O94777 84 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 TNFSF15O95150 251 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 OR2H2O95918 312 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 IFNA4P05014 189 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 UBBP0CG47 229 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 MPC1LP0DKB6 136 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 COX4I1P13073 169 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 CMPK1P30085 196 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 SDC4P31431 198 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 TMEM258P61165 79 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 SOSTDC1Q6X4U4 206 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 AAED1Q7RTV5 226 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 TCTE3Q8IZS6 198 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 OR5D16Q8NGK9 328 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 AQP3Q92482 292 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 CACYBPQ9HB71 228 aaKnown RBP1.85□□□□□ -2.11
SPG11-218ENST00000559754 BAIAP2Q9UQB8 552 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 HIGD1AQ9Y241 93 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 CCL26Q9Y258 94 aa1.85□□□□□ -2.11
SPG11-218ENST00000559754 LTBP2Q14767 1821 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 MYO5AQ9Y4I1 1855 aaKnown RBP1.84□□□□□ -2.11
SPG11-218ENST00000559754 LOC107984640A0A0U1RRK4 108 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 A0A1B0GVG6 124 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 A0A1W2PNN7 141 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 RFPL4AA6NLU0 287 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 HMSDA8MTL9 139 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 A8MWV9 139 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 RFPL4AL1F8VTS6 287 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 NAPSAO96009 420 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 SHBGP04278 402 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 TRGC1P0CF51 173 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 CRYGAP11844 174 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 FABP2P12104 132 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 HINT1P49773 126 aaPredicted RBP1.84□□□□□ -2.11
SPG11-218ENST00000559754 ERHP84090 104 aaKnown RBP1.84□□□□□ -2.11
SPG11-218ENST00000559754 SPCS2Q15005 226 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 NNATQ16517 81 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 ZNF791Q3KP31 576 aaPredicted RBP1.84□□□□□ -2.11
SPG11-218ENST00000559754 Q6ZQT0 140 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 WFDC11Q8NEX6 87 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 TVP23CQ96ET8 276 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 BCL2L10Q9HD36 194 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 PRO2289Q9P1D8 64 aa1.84□□□□□ -2.11
SPG11-218ENST00000559754 ARHGEF11O15085 1522 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms