RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 PBDC1Q9BVG4 233 aa9.32□□□□□ -0.92
TPM1-220ENST00000559556 IGHV3OR16-12A0A075B7B8 117 aa9.31□□□□□ -0.92
TPM1-220ENST00000559556 IFNA21P01568 189 aa9.31□□□□□ -0.92
TPM1-220ENST00000559556 TNFSF8P32971 234 aa9.31□□□□□ -0.92
TPM1-220ENST00000559556 ID1P41134 155 aa9.31□□□□□ -0.92
TPM1-220ENST00000559556 EMP1P54849 157 aa9.31□□□□□ -0.92
TPM1-220ENST00000559556 FXYD7P58549 80 aa9.31□□□□□ -0.92
TPM1-220ENST00000559556 KLF9Q13886 244 aaPredicted RBP9.31□□□□□ -0.92
TPM1-220ENST00000559556 GAMTQ14353 236 aa9.31□□□□□ -0.92
TPM1-220ENST00000559556 SMCO1Q147U7 214 aa9.31□□□□□ -0.92
TPM1-220ENST00000559556 RNF212Q495C1 297 aa9.31□□□□□ -0.92
TPM1-220ENST00000559556 C1orf194Q5T5A4 169 aa9.31□□□□□ -0.92
TPM1-220ENST00000559556 FAM222AQ5U5X8 452 aa9.31□□□□□ -0.92
TPM1-220ENST00000559556 OR51S1Q8NGJ8 323 aa9.31□□□□□ -0.92
TPM1-220ENST00000559556 SLC35B3Q9H1N7 401 aa9.31□□□□□ -0.92
TPM1-220ENST00000559556 RBKSQ9H477 322 aa9.31□□□□□ -0.92
TPM1-220ENST00000559556 IGLV2-18A0A075B6J9 118 aa9.3□□□□□ -0.92
TPM1-220ENST00000559556 A0A0B4J2A0 478 aa9.3□□□□□ -0.92
TPM1-220ENST00000559556 FABP12A6NFH5 140 aa9.3□□□□□ -0.92
TPM1-220ENST00000559556 ZFP92A6NM28 416 aa9.3□□□□□ -0.92
TPM1-220ENST00000559556 A8MTW9 85 aa9.3□□□□□ -0.92
TPM1-220ENST00000559556 ISLRO14498 428 aa9.3□□□□□ -0.92
TPM1-220ENST00000559556 CTDSPLO15194 276 aa9.3□□□□□ -0.92
TPM1-220ENST00000559556 GPX4P36969 197 aaPredicted RBP9.3□□□□□ -0.92
TPM1-220ENST00000559556 CCR6P51684 374 aa9.3□□□□□ -0.92
TPM1-220ENST00000559556 ATP5IP56385 69 aaPredicted RBP9.3□□□□□ -0.92
TPM1-220ENST00000559556 ZNF90Q03938 601 aa9.3□□□□□ -0.92
TPM1-220ENST00000559556 CCDC190Q86UF4 302 aa9.3□□□□□ -0.92
TPM1-220ENST00000559556 COQ8AQ8NI60 647 aa9.3□□□□□ -0.92
TPM1-220ENST00000559556 LINC00052Q96N35 136 aa9.3□□□□□ -0.92
TPM1-220ENST00000559556 PRR13Q9NZ81 148 aa9.3□□□□□ -0.92
TPM1-220ENST00000559556 SHPKQ9UHJ6 478 aa9.3□□□□□ -0.92
TPM1-220ENST00000559556 KCNIP3Q9Y2W7 256 aa9.3□□□□□ -0.92
TPM1-220ENST00000559556 GOLT1BQ9Y3E0 138 aa9.3□□□□□ -0.92
TPM1-220ENST00000559556 A0A0J9YX75 114 aa9.29□□□□□ -0.92
TPM1-220ENST00000559556 ANKRD20A5PA0PJZ0 165 aa9.29□□□□□ -0.92
TPM1-220ENST00000559556 FABP1P07148 127 aa9.29□□□□□ -0.92
TPM1-220ENST00000559556 LYZP61626 148 aa9.29□□□□□ -0.92
TPM1-220ENST00000559556 PSG9Q00887 426 aa9.29□□□□□ -0.92
TPM1-220ENST00000559556 ZNF846Q147U1 533 aa9.29□□□□□ -0.92
TPM1-220ENST00000559556 SAMD13Q5VXD3 122 aa9.29□□□□□ -0.92
TPM1-220ENST00000559556 LYZL2Q7Z4W2 148 aa9.29□□□□□ -0.92
TPM1-220ENST00000559556 C1orf158Q8N1D5 194 aa9.29□□□□□ -0.92
TPM1-220ENST00000559556 OR4B1Q8NGF8 309 aa9.29□□□□□ -0.92
TPM1-220ENST00000559556 SLC35E1Q96K37 410 aa9.29□□□□□ -0.92
TPM1-220ENST00000559556 APOBP04114 4563 aaKnown RBP9.29□□□□□ -0.92
TPM1-220ENST00000559556 LOC102723971A0A1B0GUV8 181 aa9.28□□□□□ -0.92
TPM1-220ENST00000559556 HBE1P02100 147 aa9.28□□□□□ -0.92
TPM1-220ENST00000559556 MEOX2P50222 304 aa9.28□□□□□ -0.92
TPM1-220ENST00000559556 IL18Q14116 193 aa9.28□□□□□ -0.92
TPM1-220ENST00000559556 FAM78BQ5VT40 261 aa9.28□□□□□ -0.92
TPM1-220ENST00000559556 TRGV9Q99603 122 aa9.28□□□□□ -0.92
TPM1-220ENST00000559556 RPRMQ9NS64 109 aa9.28□□□□□ -0.92
TPM1-220ENST00000559556 YTHDF2Q9Y5A9 579 aaKnown RBP9.28□□□□□ -0.92
TPM1-220ENST00000559556 IGKV1OR2-108A0A075B7D4 117 aa9.27□□□□□ -0.93
TPM1-220ENST00000559556 F6UB75 175 aa9.27□□□□□ -0.93
TPM1-220ENST00000559556 SRPXP78539 464 aa9.27□□□□□ -0.93
TPM1-220ENST00000559556 RRN3P1Q2M238 152 aa9.27□□□□□ -0.93
TPM1-220ENST00000559556 SOHLH1Q5JUK2 328 aa9.27□□□□□ -0.93
TPM1-220ENST00000559556 EBLN2Q6P2I7 272 aa9.27□□□□□ -0.93
TPM1-220ENST00000559556 AMTNQ6UX39 209 aa9.27□□□□□ -0.93
TPM1-220ENST00000559556 OR8I2Q8N0Y5 310 aa9.27□□□□□ -0.93
TPM1-220ENST00000559556 THAP8Q8NA92 274 aa9.27□□□□□ -0.93
TPM1-220ENST00000559556 SCGB3A2Q96PL1 93 aa9.27□□□□□ -0.93
TPM1-220ENST00000559556 SOSTQ9BQB4 213 aa9.27□□□□□ -0.93
TPM1-220ENST00000559556 C7orf50Q9BRJ6 194 aaKnown RBP9.27□□□□□ -0.93
TPM1-220ENST00000559556 PLA2G2EQ9NZK7 142 aa9.27□□□□□ -0.93
TPM1-220ENST00000559556 SCP2D1Q9UJQ7 156 aa9.27□□□□□ -0.93
TPM1-220ENST00000559556 SNRPGP15A8MWD9 76 aa9.26□□□□□ -0.93
TPM1-220ENST00000559556 PITX3O75364 302 aa9.26□□□□□ -0.93
TPM1-220ENST00000559556 HTN3P15516 51 aa9.26□□□□□ -0.93
TPM1-220ENST00000559556 AKR1C4P17516 323 aa9.26□□□□□ -0.93
TPM1-220ENST00000559556 DAD1P61803 113 aa9.26□□□□□ -0.93
TPM1-220ENST00000559556 TMEM88Q6PEY1 159 aa9.26□□□□□ -0.93
TPM1-220ENST00000559556 ZNF575Q86XF7 245 aa9.26□□□□□ -0.93
TPM1-220ENST00000559556 C15orf53Q8NAA6 179 aa9.26□□□□□ -0.93
TPM1-220ENST00000559556 OR1S1Q8NH92 325 aa9.26□□□□□ -0.93
TPM1-220ENST00000559556 PPP1R14BQ96C90 147 aa9.26□□□□□ -0.93
TPM1-220ENST00000559556 C20orf173Q96LM9 149 aa9.26□□□□□ -0.93
TPM1-220ENST00000559556 IGF2BP2-AS1Q96M15 143 aa9.26□□□□□ -0.93
TPM1-220ENST00000559556 CCDC32Q9BV29 185 aa9.26□□□□□ -0.93
TPM1-220ENST00000559556 DOK5Q9P104 306 aa9.26□□□□□ -0.93
TPM1-220ENST00000559556 SLC45A2Q9UMX9 530 aa9.26□□□□□ -0.93
TPM1-220ENST00000559556 DNAH5Q8TE73 4624 aa9.25□□□□□ -0.93
TPM1-220ENST00000559556 PIGBOS1A0A0B4J2F0 54 aa9.25□□□□□ -0.93
TPM1-220ENST00000559556 DUXBA0A1W2PPF3 345 aa9.25□□□□□ -0.93
TPM1-220ENST00000559556 CFDP00746 253 aaPredicted RBP9.25□□□□□ -0.93
TPM1-220ENST00000559556 ANXA3P12429 323 aa9.25□□□□□ -0.93
TPM1-220ENST00000559556 GALR1P47211 349 aa9.25□□□□□ -0.93
TPM1-220ENST00000559556 FAM3BP58499 235 aaPredicted RBP9.25□□□□□ -0.93
TPM1-220ENST00000559556 RAB11AP62491 216 aa9.25□□□□□ -0.93
TPM1-220ENST00000559556 OR2F1Q13607 317 aa9.25□□□□□ -0.93
TPM1-220ENST00000559556 PYDC2Q56P42 97 aa9.25□□□□□ -0.93
TPM1-220ENST00000559556 C1orf134Q5TEV5 83 aa9.25□□□□□ -0.93
TPM1-220ENST00000559556 GSG1LQ6UXU4 331 aa9.25□□□□□ -0.93
TPM1-220ENST00000559556 C16orf92Q96LL3 132 aa9.25□□□□□ -0.93
TPM1-220ENST00000559556 C17orf77Q96MU5 243 aa9.25□□□□□ -0.93
TPM1-220ENST00000559556 MAGT1Q9H0U3 335 aa9.25□□□□□ -0.93
TPM1-220ENST00000559556 SLC25A32Q9H2D1 315 aa9.25□□□□□ -0.93
TPM1-220ENST00000559556 PRSS46E5RG02 174 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms