RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 U3KQK5 164 aa13.85□□□□□ -0.19
CASC4-209ENST00000559222 LINC00869P0C866 280 aa13.84□□□□□ -0.19
CASC4-209ENST00000559222 DEFB131AP59861 70 aa13.84□□□□□ -0.19
CASC4-209ENST00000559222 NHLH2Q02577 135 aa13.84□□□□□ -0.19
CASC4-209ENST00000559222 LEMD1Q68G75 181 aa13.84□□□□□ -0.19
CASC4-209ENST00000559222 SIGLEC15Q6ZMC9 328 aa13.84□□□□□ -0.19
CASC4-209ENST00000559222 RCHY1Q96PM5 261 aa13.84□□□□□ -0.19
CASC4-209ENST00000559222 FAM110AQ9BQ89 295 aa13.84□□□□□ -0.19
CASC4-209ENST00000559222 SCRT1Q9BWW7 348 aa13.84□□□□□ -0.19
CASC4-209ENST00000559222 KMT2CQ8NEZ4 4911 aaKnown RBP13.83□□□□□ -0.2
CASC4-209ENST00000559222 AGRNO00468 2067 aa13.83□□□□□ -0.2
CASC4-209ENST00000559222 UBE2L5PA0A1B0GUS4 154 aa13.83□□□□□ -0.2
CASC4-209ENST00000559222 AGPAT2O15120 278 aa13.83□□□□□ -0.2
CASC4-209ENST00000559222 MPC2O95563 127 aa13.83□□□□□ -0.2
CASC4-209ENST00000559222 CD5P06127 495 aa13.83□□□□□ -0.2
CASC4-209ENST00000559222 ZNF688P0C7X2 276 aa13.83□□□□□ -0.2
CASC4-209ENST00000559222 RPL35AP18077 110 aaKnown RBP13.83□□□□□ -0.2
CASC4-209ENST00000559222 PAFAH1B2P68402 229 aa13.83□□□□□ -0.2
CASC4-209ENST00000559222 EWSR1Q01844 656 aaKnown RBP eCLIP13.83□□□□□ -0.2
CASC4-209ENST00000559222 RGS21Q2M5E4 152 aa13.83□□□□□ -0.2
CASC4-209ENST00000559222 VWC2Q2TAL6 325 aa13.83□□□□□ -0.2
CASC4-209ENST00000559222 TEPPQ6URK8 271 aa13.83□□□□□ -0.2
CASC4-209ENST00000559222 PPP1R14BQ96C90 147 aa13.83□□□□□ -0.2
CASC4-209ENST00000559222 C17orf77Q96MU5 243 aa13.83□□□□□ -0.2
CASC4-209ENST00000559222 GGACTQ9BVM4 153 aa13.83□□□□□ -0.2
CASC4-209ENST00000559222 SLC25A32Q9H2D1 315 aa13.83□□□□□ -0.2
CASC4-209ENST00000559222 SLC45A2Q9UMX9 530 aa13.83□□□□□ -0.2
CASC4-209ENST00000559222 TRAV2A0A0B4J234 112 aa13.82□□□□□ -0.2
CASC4-209ENST00000559222 HELTA6NFD8 242 aa13.82□□□□□ -0.2
CASC4-209ENST00000559222 E5RGE8 158 aa13.82□□□□□ -0.2
CASC4-209ENST00000559222 CYCSP99999 105 aaKnown RBP13.82□□□□□ -0.2
CASC4-209ENST00000559222 OXA1LQ15070 435 aa13.82□□□□□ -0.2
CASC4-209ENST00000559222 PATE2Q6UY27 113 aa13.82□□□□□ -0.2
CASC4-209ENST00000559222 UHRF2Q96PU4 802 aa13.82□□□□□ -0.2
CASC4-209ENST00000559222 TMEM147Q9BVK8 224 aa13.82□□□□□ -0.2
CASC4-209ENST00000559222 GGTLC1Q9BX51 225 aa13.82□□□□□ -0.2
CASC4-209ENST00000559222 SLC25A22Q9H936 323 aa13.82□□□□□ -0.2
CASC4-209ENST00000559222 UQCC1Q9NVA1 299 aa13.82□□□□□ -0.2
CASC4-209ENST00000559222 MBD2Q9UBB5 411 aa13.82□□□□□ -0.2
CASC4-209ENST00000559222 WDR83OSQ9Y284 106 aa13.82□□□□□ -0.2
CASC4-209ENST00000559222 LOC102724200A0A096LPH7 203 aaPredicted RBP13.81□□□□□ -0.2
CASC4-209ENST00000559222 H3BRN7 92 aa13.81□□□□□ -0.2
CASC4-209ENST00000559222 STX12Q86Y82 276 aa13.81□□□□□ -0.2
CASC4-209ENST00000559222 ZNF98A6NK75 572 aa13.8□□□□□ -0.2
CASC4-209ENST00000559222 CFDP00746 253 aaPredicted RBP13.8□□□□□ -0.2
CASC4-209ENST00000559222 RLN2P04090 185 aa13.8□□□□□ -0.2
CASC4-209ENST00000559222 DEFB1P60022 68 aa13.8□□□□□ -0.2
CASC4-209ENST00000559222 PLP1P60201 277 aa13.8□□□□□ -0.2
CASC4-209ENST00000559222 MIC13Q5XKP0 118 aa13.8□□□□□ -0.2
CASC4-209ENST00000559222 SLC25A39Q9BZJ4 359 aaPredicted RBP13.8□□□□□ -0.2
CASC4-209ENST00000559222 ARL6Q9H0F7 186 aa13.8□□□□□ -0.2
CASC4-209ENST00000559222 MED28Q9H204 178 aa13.8□□□□□ -0.2
CASC4-209ENST00000559222 NRN1Q9NPD7 142 aa13.8□□□□□ -0.2
CASC4-209ENST00000559222 KNCNA6PVL3 124 aa13.79□□□□□ -0.2
CASC4-209ENST00000559222 SOCS3O14543 225 aa13.79□□□□□ -0.2
CASC4-209ENST00000559222 OR5G3P0C626 314 aa13.79□□□□□ -0.2
CASC4-209ENST00000559222 S100A11P31949 105 aa13.79□□□□□ -0.2
CASC4-209ENST00000559222 SELENOTP62341 195 aa13.79□□□□□ -0.2
CASC4-209ENST00000559222 CLINT1Q14677 625 aa13.79□□□□□ -0.2
CASC4-209ENST00000559222 MORN5Q5VZ52 161 aa13.79□□□□□ -0.2
CASC4-209ENST00000559222 ZNF546Q86UE3 836 aa13.79□□□□□ -0.2
CASC4-209ENST00000559222 OR5C1Q8NGR4 320 aa13.79□□□□□ -0.2
CASC4-209ENST00000559222 SPATA25Q9BR10 227 aa13.79□□□□□ -0.2
CASC4-209ENST00000559222 ZMAT4Q9H898 229 aa13.79□□□□□ -0.2
CASC4-209ENST00000559222 HIGD1AQ9Y241 93 aa13.79□□□□□ -0.2
CASC4-209ENST00000559222 HYPMO75409 117 aa13.78□□□□□ -0.2
CASC4-209ENST00000559222 FGF7P21781 194 aa13.78□□□□□ -0.2
CASC4-209ENST00000559222 NUP62P37198 522 aaPredicted RBP13.78□□□□□ -0.2
CASC4-209ENST00000559222 CAMLGP49069 296 aa13.78□□□□□ -0.2
CASC4-209ENST00000559222 HBG1P69891 147 aa13.78□□□□□ -0.2
CASC4-209ENST00000559222 HBG2P69892 147 aa13.78□□□□□ -0.2
CASC4-209ENST00000559222 BAXQ07812 192 aa13.78□□□□□ -0.2
CASC4-209ENST00000559222 Q5BKY6 102 aa13.78□□□□□ -0.2
CASC4-209ENST00000559222 PSMG4Q5JS54 123 aa13.78□□□□□ -0.2
CASC4-209ENST00000559222 C1orf194Q5T5A4 169 aa13.78□□□□□ -0.2
CASC4-209ENST00000559222 OR8I2Q8N0Y5 310 aa13.78□□□□□ -0.2
CASC4-209ENST00000559222 THAP6Q8TBB0 222 aa13.78□□□□□ -0.2
CASC4-209ENST00000559222 SHANK2-AS3Q9BTD1 123 aa13.78□□□□□ -0.2
CASC4-209ENST00000559222 AP2S1P53680 142 aaPredicted RBP13.77□□□□□ -0.21
CASC4-209ENST00000559222 PRR20EP86478 221 aa13.77□□□□□ -0.21
CASC4-209ENST00000559222 PRR20CP86479 221 aa13.77□□□□□ -0.21
CASC4-209ENST00000559222 PRR20DP86480 221 aa13.77□□□□□ -0.21
CASC4-209ENST00000559222 PRR20BP86481 221 aa13.77□□□□□ -0.21
CASC4-209ENST00000559222 PRR20AP86496 221 aa13.77□□□□□ -0.21
CASC4-209ENST00000559222 OPCMLQ14982 345 aa13.77□□□□□ -0.21
CASC4-209ENST00000559222 SLC25A31Q9H0C2 315 aa13.77□□□□□ -0.21
CASC4-209ENST00000559222 ARV1Q9H2C2 271 aa13.77□□□□□ -0.21
CASC4-209ENST00000559222 LYL1P12980 280 aa13.76□□□□□ -0.21
CASC4-209ENST00000559222 RAP2BP61225 183 aa13.76□□□□□ -0.21
CASC4-209ENST00000559222 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.76□□□□□ -0.21
CASC4-209ENST00000559222 TMEM37Q8WXS4 190 aa13.76□□□□□ -0.21
CASC4-209ENST00000559222 SMIM3Q9BZL3 60 aa13.76□□□□□ -0.21
CASC4-209ENST00000559222 FBXL17Q9UF56 701 aa13.76□□□□□ -0.21
CASC4-209ENST00000559222 HSPB11Q9Y547 144 aa13.76□□□□□ -0.21
CASC4-209ENST00000559222 STAB2Q8WWQ8 2551 aa13.75□□□□□ -0.21
CASC4-209ENST00000559222 CMC4P56277 68 aaPredicted RBP13.75□□□□□ -0.21
CASC4-209ENST00000559222 ATP6V1FQ16864 119 aa13.75□□□□□ -0.21
CASC4-209ENST00000559222 DEFB135Q30KP9 77 aa13.75□□□□□ -0.21
CASC4-209ENST00000559222 C20orf173Q96LM9 149 aa13.75□□□□□ -0.21
CASC4-209ENST00000559222 RSG1Q9BU20 258 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms