RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 C2orf70A6NJV1 201 aa13.21□□□□□ -0.29
SPG11-215ENST00000559193 VSTM5A8MXK1 200 aa13.21□□□□□ -0.29
SPG11-215ENST00000559193 P01737 135 aa13.21□□□□□ -0.29
SPG11-215ENST00000559193 HNRNPA3P51991 378 aaKnown RBP13.21□□□□□ -0.29
SPG11-215ENST00000559193 PMCHL1Q16048 86 aa13.21□□□□□ -0.29
SPG11-215ENST00000559193 SSX8Q7RTT4 187 aa13.21□□□□□ -0.29
SPG11-215ENST00000559193 KIR3DL3Q8N743 410 aa13.21□□□□□ -0.29
SPG11-215ENST00000559193 TNFRSF14Q92956 283 aa13.21□□□□□ -0.29
SPG11-215ENST00000559193 ABHD17AQ96GS6 310 aa13.21□□□□□ -0.29
SPG11-215ENST00000559193 IGHV1-3A0A0C4DH29 117 aa13.21□□□□□ -0.3
SPG11-215ENST00000559193 A8MWL6 223 aa13.21□□□□□ -0.3
SPG11-215ENST00000559193 GFRALQ6UXV0 394 aa13.21□□□□□ -0.3
SPG11-215ENST00000559193 KLHDC1Q8N7A1 406 aa13.21□□□□□ -0.3
SPG11-215ENST00000559193 Q8NA96 180 aa13.21□□□□□ -0.3
SPG11-215ENST00000559193 HIGD1AQ9Y241 93 aa13.21□□□□□ -0.3
SPG11-215ENST00000559193 CD24P25063 80 aa13.2□□□□□ -0.3
SPG11-215ENST00000559193 LYZP61626 148 aa13.2□□□□□ -0.3
SPG11-215ENST00000559193 Q56UQ5 140 aa13.2□□□□□ -0.3
SPG11-215ENST00000559193 SPATA12Q7Z6I5 190 aa13.2□□□□□ -0.3
SPG11-215ENST00000559193 PGLYRP4Q96LB8 373 aa13.2□□□□□ -0.3
SPG11-215ENST00000559193 ZNF835Q9Y2P0 537 aa13.2□□□□□ -0.3
SPG11-215ENST00000559193 ZNF318Q5VUA4 2279 aa13.2□□□□□ -0.3
SPG11-215ENST00000559193 IGLC1P0CG04 106 aa13.2□□□□□ -0.3
SPG11-215ENST00000559193 PSG1P11464 419 aa13.2□□□□□ -0.3
SPG11-215ENST00000559193 Q71RC1 249 aaPredicted RBP13.2□□□□□ -0.3
SPG11-215ENST00000559193 Q86TA4 180 aa13.2□□□□□ -0.3
SPG11-215ENST00000559193 PPP1R27Q86WC6 154 aa13.2□□□□□ -0.3
SPG11-215ENST00000559193 INSIG2Q9Y5U4 225 aa13.2□□□□□ -0.3
SPG11-215ENST00000559193 MAP1BP46821 2468 aaKnown RBP13.2□□□□□ -0.3
SPG11-215ENST00000559193 M0QZ24 198 aa13.19□□□□□ -0.3
SPG11-215ENST00000559193 FAM120AOSQ5T036 256 aa13.19□□□□□ -0.3
SPG11-215ENST00000559193 STPG4Q8N801 248 aa13.19□□□□□ -0.3
SPG11-215ENST00000559193 LAMTOR2Q9Y2Q5 125 aa13.19□□□□□ -0.3
SPG11-215ENST00000559193 SOX21Q9Y651 276 aaPredicted RBP13.19□□□□□ -0.3
SPG11-215ENST00000559193 ZGRF1Q86YA3 2104 aa13.19□□□□□ -0.3
SPG11-215ENST00000559193 TRAV8-1A0A0A6YYK1 113 aa13.19□□□□□ -0.3
SPG11-215ENST00000559193 SH2D7A6NKC9 451 aaPredicted RBP13.19□□□□□ -0.3
SPG11-215ENST00000559193 BUB1B-PAK6H3BSN5 160 aa13.19□□□□□ -0.3
SPG11-215ENST00000559193 FOXA3P55318 350 aaPredicted RBP13.19□□□□□ -0.3
SPG11-215ENST00000559193 FBXL15Q9H469 300 aa13.19□□□□□ -0.3
SPG11-215ENST00000559193 CLEC5AQ9NY25 188 aa13.19□□□□□ -0.3
SPG11-215ENST00000559193 RALYQ9UKM9 306 aaKnown RBP13.19□□□□□ -0.3
SPG11-215ENST00000559193 OTORQ9NRC9 128 aa13.18□□□□□ -0.3
SPG11-215ENST00000559193 ANKRD11Q6UB99 2663 aaPredicted RBP13.18□□□□□ -0.3
SPG11-215ENST00000559193 TRAV9-2A0A087WT02 112 aa13.18□□□□□ -0.3
SPG11-215ENST00000559193 NPIPB6E9PJ23 425 aa13.18□□□□□ -0.3
SPG11-215ENST00000559193 LYNX1G3V0Z9 82 aa13.18□□□□□ -0.3
SPG11-215ENST00000559193 LYNX1P0DP58 116 aa13.18□□□□□ -0.3
SPG11-215ENST00000559193 SRSF12Q8WXF0 261 aaKnown RBP13.18□□□□□ -0.3
SPG11-215ENST00000559193 SLC25A39Q9BZJ4 359 aaPredicted RBP13.18□□□□□ -0.3
SPG11-215ENST00000559193 GFRA4Q9GZZ7 299 aa13.18□□□□□ -0.3
SPG11-215ENST00000559193 ADGRG4Q8IZF6 3080 aa13.17□□□□□ -0.3
SPG11-215ENST00000559193 I3L2K1 104 aa13.17□□□□□ -0.3
SPG11-215ENST00000559193 IGLV2-11P01706 119 aa13.17□□□□□ -0.3
SPG11-215ENST00000559193 TSPOP30536 169 aa13.17□□□□□ -0.3
SPG11-215ENST00000559193 RBPMS2Q6ZRY4 209 aaKnown RBP13.17□□□□□ -0.3
SPG11-215ENST00000559193 EXOC3-AS1Q8N2X6 119 aa13.17□□□□□ -0.3
SPG11-215ENST00000559193 CIARTQ8N365 385 aaPredicted RBP13.17□□□□□ -0.3
SPG11-215ENST00000559193 TMEM14CQ9P0S9 112 aa13.17□□□□□ -0.3
SPG11-215ENST00000559193 NDUFB8O95169 186 aa13.17□□□□□ -0.3
SPG11-215ENST00000559193 COX7A1P24310 79 aa13.17□□□□□ -0.3
SPG11-215ENST00000559193 DAZAP1Q96EP5 407 aaKnown RBP13.17□□□□□ -0.3
SPG11-215ENST00000559193 ZFP30Q9Y2G7 519 aa13.17□□□□□ -0.3
SPG11-215ENST00000559193 PCNX1Q96RV3 2341 aa13.16□□□□□ -0.3
SPG11-215ENST00000559193 ZNF292O60281 2723 aa13.16□□□□□ -0.3
SPG11-215ENST00000559193 TOX4O94842 621 aa13.16□□□□□ -0.3
SPG11-215ENST00000559193 IGLL1P15814 213 aa13.16□□□□□ -0.3
SPG11-215ENST00000559193 HOXB4P17483 251 aaPredicted RBP13.16□□□□□ -0.3
SPG11-215ENST00000559193 PRR30Q53SZ7 412 aaPredicted RBP13.16□□□□□ -0.3
SPG11-215ENST00000559193 RBM14Q96PK6 669 aaKnown RBP13.16□□□□□ -0.3
SPG11-215ENST00000559193 NGBQ9NPG2 151 aa13.16□□□□□ -0.3
SPG11-215ENST00000559193 MALRD1Q5VYJ5 2156 aa13.16□□□□□ -0.3
SPG11-215ENST00000559193 APOBEC3AP31941 199 aaPredicted RBP13.16□□□□□ -0.3
SPG11-215ENST00000559193 RBPJQ06330 500 aa13.16□□□□□ -0.3
SPG11-215ENST00000559193 GOLT1AQ6ZVE7 132 aa13.16□□□□□ -0.3
SPG11-215ENST00000559193 KALRNO60229 2985 aa13.15□□□□□ -0.3
SPG11-215ENST00000559193 IGKV1-17P01599 117 aa13.15□□□□□ -0.3
SPG11-215ENST00000559193 ATMQ13315 3056 aa13.15□□□□□ -0.3
SPG11-215ENST00000559193 IGHV1-24A0A0C4DH33 117 aa13.15□□□□□ -0.3
SPG11-215ENST00000559193 OVOL3O00110 214 aa13.15□□□□□ -0.3
SPG11-215ENST00000559193 RBP4P02753 201 aa13.15□□□□□ -0.3
SPG11-215ENST00000559193 LINC00614P0C842 121 aa13.15□□□□□ -0.3
SPG11-215ENST00000559193 COL8A1P27658 744 aa13.15□□□□□ -0.3
SPG11-215ENST00000559193 C16orf54Q6UWD8 224 aa13.15□□□□□ -0.3
SPG11-215ENST00000559193 PRNTQ86SH4 94 aa13.15□□□□□ -0.3
SPG11-215ENST00000559193 RPEQ96AT9 228 aa13.15□□□□□ -0.3
SPG11-215ENST00000559193 RASL11BQ9BPW5 248 aa13.15□□□□□ -0.3
SPG11-215ENST00000559193 TMEM70Q9BUB7 260 aa13.15□□□□□ -0.3
SPG11-215ENST00000559193 MRPS16Q9Y3D3 137 aaKnown RBP13.15□□□□□ -0.3
SPG11-215ENST00000559193 C20orf202A1L168 122 aa13.14□□□□□ -0.31
SPG11-215ENST00000559193 FAM231BA6NCW3 169 aa13.14□□□□□ -0.31
SPG11-215ENST00000559193 ZNF785A8K8V0 405 aa13.14□□□□□ -0.31
SPG11-215ENST00000559193 B9A039 149 aa13.14□□□□□ -0.31
SPG11-215ENST00000559193 APOHP02749 345 aaPredicted RBP13.14□□□□□ -0.31
SPG11-215ENST00000559193 FAM162BQ5T6X4 162 aa13.14□□□□□ -0.31
SPG11-215ENST00000559193 LINC00173Q6ZV60 143 aa13.14□□□□□ -0.31
SPG11-215ENST00000559193 CHCHD1Q96BP2 118 aaKnown RBP13.14□□□□□ -0.31
SPG11-215ENST00000559193 LOC102724200A0A096LPH7 203 aaPredicted RBP13.14□□□□□ -0.31
SPG11-215ENST00000559193 PPIAL4CA0A0B4J2A2 164 aa13.13□□□□□ -0.31
SPG11-215ENST00000559193 PPIAL4GP0DN37 164 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms