RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 TSTD3H0UI37 97 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 H3BQV1 296 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 NDUFB3O43676 98 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 OR2T1O43869 369 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 TIMM17BO60830 172 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 TRGC2P03986 189 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 BAALC-AS2P0C853 105 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 HLA-EP13747 358 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 RNASE4P34096 147 aaKnown RBP0.86□□□□□ -2.27
VPS13C-207ENST00000558919 DYNLT3P51808 116 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 DYNLT1P63172 113 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 RHOGP84095 191 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 ZNF846Q147U1 533 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 LTC4SQ16873 150 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 ESRGQ1W209 222 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 FKBP1CQ5VVH2 108 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 C1orf140Q5VVS0 124 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 SOSTDC1Q6X4U4 206 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 C9orf163Q8N9P6 203 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 TEX47Q8TBZ9 253 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 SKA2Q8WVK7 121 aaPredicted RBP0.86□□□□□ -2.27
VPS13C-207ENST00000558919 PYDC1Q8WXC3 89 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 ISOC1Q96CN7 298 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 ZNF714Q96N38 554 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 GPX7Q96SL4 187 aaPredicted RBP0.86□□□□□ -2.27
VPS13C-207ENST00000558919 SLC25A21Q9BQT8 299 aaPredicted RBP0.86□□□□□ -2.27
VPS13C-207ENST00000558919 NAA38Q9BRA0 125 aaKnown RBP0.86□□□□□ -2.27
VPS13C-207ENST00000558919 LINC00467Q9BRT7 94 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 SLC50A1Q9BRV3 221 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 ADAT1Q9BUB4 502 aaKnown RBP0.86□□□□□ -2.27
VPS13C-207ENST00000558919 RTL8AQ9BWD3 113 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 NPCDR1Q9BY65 106 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 MRPL32Q9BYC8 188 aaKnown RBP0.86□□□□□ -2.27
VPS13C-207ENST00000558919 C6orf62Q9GZU0 229 aaPredicted RBP0.86□□□□□ -2.27
VPS13C-207ENST00000558919 TMEM126AQ9H061 195 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 POPDC3Q9HBV1 291 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 BCL2L10Q9HD36 194 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 CUL9Q8IWT3 2517 aa0.86□□□□□ -2.27
VPS13C-207ENST00000558919 BAZ2BQ9UIF8 2168 aaKnown RBP0.86□□□□□ -2.27
VPS13C-207ENST00000558919 STRCQ7RTU9 1775 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 SDK1Q7Z5N4 2213 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 TRAV14DV4A0A0A6YYC5 116 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 TRAV1-1A0A0B4J248 108 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 A8MWV9 139 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 SYNMO15061 1565 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 UBL3O95164 117 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 GADD45GO95257 159 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 FAM107AO95990 144 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 ASAH2BP0C7U1 165 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 GPX2P18283 190 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 INSL3P51460 131 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 TMBIM6P55061 237 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 PLCXD2Q0VAA5 305 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 RTL8BQ17RB0 113 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 Q1T7F1 81 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 TMEM128Q5BJH2 165 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 RNASE10Q5GAN6 216 aaKnown RBP0.85□□□□□ -2.27
VPS13C-207ENST00000558919 SAMD13Q5VXD3 122 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 KRTAP5-10Q6L8G5 202 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 TOMM20LQ6UXN7 152 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 FP248Q71RG6 208 aaPredicted RBP0.85□□□□□ -2.27
VPS13C-207ENST00000558919 LINC00311Q8N616 119 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 LINC00301Q8NCQ3 95 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 EFCAB11Q9BUY7 163 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 CYSTM1Q9H1C7 97 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 OR5AC2Q9NZP5 309 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 OR52A1Q9UKL2 312 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 HS3ST2Q9Y278 367 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 NDUFAF1Q9Y375 327 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 NUBP2Q9Y5Y2 271 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 HECW1Q76N89 1606 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 MED12LQ86YW9 2145 aa0.85□□□□□ -2.27
VPS13C-207ENST00000558919 MED1Q15648 1581 aaPredicted RBP0.84□□□□□ -2.27
VPS13C-207ENST00000558919 SETD5Q9C0A6 1442 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 ODAMA1E959 279 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 CST7O76096 145 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 IFNA4P05014 189 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 CXCL1P09341 107 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 BCL2P10415 239 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 MIFP14174 115 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 SSR2P43308 183 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 ARPP19P56211 112 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 KRTAP10-4P60372 401 aaPredicted RBP0.84□□□□□ -2.27
VPS13C-207ENST00000558919 ANGPTL5Q86XS5 388 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 C3orf56Q8N813 242 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 OR2T35Q8NGX2 323 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 OR4K15Q8NH41 348 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 BORCS8Q96FH0 119 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 RMND5BQ96G75 393 aaPredicted RBP0.84□□□□□ -2.27
VPS13C-207ENST00000558919 Q96M85 177 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 C14orf132Q9NPU4 83 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 BATF3Q9NR55 127 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 C19orf12Q9NSK7 152 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 GINS2Q9Y248 185 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 LAMTOR2Q9Y2Q5 125 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 HSPB11Q9Y547 144 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 LY96Q9Y6Y9 160 aa0.84□□□□□ -2.27
VPS13C-207ENST00000558919 INTS1Q8N201 2190 aaKnown RBP0.84□□□□□ -2.28
VPS13C-207ENST00000558919 MED13Q9UHV7 2174 aa0.84□□□□□ -2.28
VPS13C-207ENST00000558919 MICAL3Q7RTP6 2002 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms