RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 YPEL3P61236 119 aaPredicted RBP5.48□□□□□ -1.53
TRAF3-206ENST00000558880 RPP30P78346 268 aaKnown RBP5.48□□□□□ -1.53
TRAF3-206ENST00000558880 ZNF616Q08AN1 781 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 OR2F1Q13607 317 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 OPCMLQ14982 345 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 ATP6V1FQ16864 119 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 Q56UQ5 140 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 GCSAMLQ5JQS6 135 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 RPL7L1Q6DKI1 246 aaKnown RBP5.48□□□□□ -1.53
TRAF3-206ENST00000558880 UBAC2Q8NBM4 344 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 OR1S2Q8NGQ3 325 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 TMEM37Q8WXS4 190 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 TMEM190Q8WZ59 177 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 ATP5SQ99766 215 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 PARD6GQ9BYG4 376 aaPredicted RBP5.48□□□□□ -1.53
TRAF3-206ENST00000558880 SLC25A31Q9H0C2 315 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 NPVFQ9HCQ7 196 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 UQCC1Q9NVA1 299 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 DNAH9Q9NYC9 4486 aa5.48□□□□□ -1.53
TRAF3-206ENST00000558880 NOTCH3Q9UM47 2321 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 IGHV3OR16-8A0A075B7F1 116 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 UBE2L5PA0A1B0GUS4 154 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 KRTAP23-1A1A580 65 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 A8MWP6 167 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 LGALS9O00182 355 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 NDUFA4O00483 81 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 GNG7O60262 68 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 TOMM40O96008 361 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 CSN3P07498 182 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 NPBWR1P48145 328 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 AP2S1P53680 142 aaPredicted RBP5.47□□□□□ -1.53
TRAF3-206ENST00000558880 SYNJ2BPP57105 145 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 PLP1P60201 277 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 KHDC1LQ5JSQ8 128 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 FAM209BQ5JX69 171 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 MORN5Q5VZ52 161 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 MIC13Q5XKP0 118 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 ETFRF1Q6IPR1 90 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 SPSB3Q6PJ21 355 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 BTNL8Q6UX41 500 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 CYP2G1PQ6ZSU1 146 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 TMUB2Q71RG4 321 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 STX12Q86Y82 276 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 SLC35E1Q96K37 410 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 HYLS1Q96M11 299 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 RSG1Q9BU20 258 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 NPCDR1Q9BY65 106 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 KRTAP4-5Q9BYR2 181 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 SH3BGRL3Q9H299 93 aa5.47□□□□□ -1.53
TRAF3-206ENST00000558880 MRPL27Q9P0M9 148 aaKnown RBP5.47□□□□□ -1.53
TRAF3-206ENST00000558880 PUS1Q9Y606 427 aaKnown RBP eCLIP5.47□□□□□ -1.53
TRAF3-206ENST00000558880 MRPS12O15235 138 aaKnown RBP5.46□□□□□ -1.54
TRAF3-206ENST00000558880 CYB5BO43169 146 aa5.46□□□□□ -1.54
TRAF3-206ENST00000558880 BCL2L11O43521 198 aa5.46□□□□□ -1.54
TRAF3-206ENST00000558880 ATP6V0CP27449 155 aa5.46□□□□□ -1.54
TRAF3-206ENST00000558880 RPL29P47914 159 aaKnown RBP5.46□□□□□ -1.54
TRAF3-206ENST00000558880 HBG1P69891 147 aa5.46□□□□□ -1.54
TRAF3-206ENST00000558880 HBG2P69892 147 aa5.46□□□□□ -1.54
TRAF3-206ENST00000558880 AKR1C1Q04828 323 aa5.46□□□□□ -1.54
TRAF3-206ENST00000558880 TOR2AQ5JU69 321 aa5.46□□□□□ -1.54
TRAF3-206ENST00000558880 FAM90A2PQ658T7 463 aa5.46□□□□□ -1.54
TRAF3-206ENST00000558880 ZNF600Q6ZNG1 722 aa5.46□□□□□ -1.54
TRAF3-206ENST00000558880 OR51G1Q8NGK1 321 aa5.46□□□□□ -1.54
TRAF3-206ENST00000558880 MRAPQ8TCY5 172 aa5.46□□□□□ -1.54
TRAF3-206ENST00000558880 ST8SIA2Q92186 375 aa5.46□□□□□ -1.54
TRAF3-206ENST00000558880 VSIRQ9H7M9 311 aa5.46□□□□□ -1.54
TRAF3-206ENST00000558880 SELENOKQ9Y6D0 94 aa5.46□□□□□ -1.54
TRAF3-206ENST00000558880 TRAV30A0A087WSZ9 112 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 A0A0D9SG52 128 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 SMCO3A2RU48 225 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 C2orf70A6NJV1 201 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 ZFP92A6NM28 416 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 K7EMT4 169 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 NUPL2O15504 423 aaKnown RBP5.45□□□□□ -1.54
TRAF3-206ENST00000558880 ZNF207O43670 478 aaKnown RBP5.45□□□□□ -1.54
TRAF3-206ENST00000558880 EIF3GO75821 320 aaKnown RBP eCLIP5.45□□□□□ -1.54
TRAF3-206ENST00000558880 CFDP00746 253 aaPredicted RBP5.45□□□□□ -1.54
TRAF3-206ENST00000558880 RD3LP0DJH9 198 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 ZP3P21754 424 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 FGF7P21781 194 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 CRYBB3P26998 211 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 CAMLGP49069 296 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 ZFP69Q49AA0 526 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 SPATA31B1PQ5VZV4 182 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 SSX7Q7RTT5 188 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 BPIFCQ8NFQ6 507 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 OR9G4Q8NGQ1 327 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 RNF125Q96EQ8 232 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 ARPC5LQ9BPX5 153 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 GINS3Q9BRX5 216 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 GAR1Q9NY12 217 aaKnown RBP5.45□□□□□ -1.54
TRAF3-206ENST00000558880 SIGLEC8Q9NYZ4 499 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 MLXQ9UH92 298 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 PXMP4Q9Y6I8 212 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 SMAD5-AS1Q9Y6J3 95 aa5.45□□□□□ -1.54
TRAF3-206ENST00000558880 HUWE1Q7Z6Z7 4374 aaKnown RBP5.45□□□□□ -1.54
TRAF3-206ENST00000558880 IGHV3OR16-13A0A075B7E8 117 aa5.44□□□□□ -1.54
TRAF3-206ENST00000558880 IGHV3-74A0A0B4J1X5 117 aa5.44□□□□□ -1.54
TRAF3-206ENST00000558880 IZUMO1RA6ND01 250 aa5.44□□□□□ -1.54
TRAF3-206ENST00000558880 G3V4G9 280 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms