RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 SEPSECSQ9HD40 501 aaKnown RBP9.69□□□□□ -0.86
VPS18-203ENST00000558855 WRBO00258 174 aa9.68□□□□□ -0.86
VPS18-203ENST00000558855 ADAP1O75689 374 aa9.68□□□□□ -0.86
VPS18-203ENST00000558855 CCNKO75909 580 aa9.68□□□□□ -0.86
VPS18-203ENST00000558855 SFT2D2O95562 160 aa9.68□□□□□ -0.86
VPS18-203ENST00000558855 AMBPP02760 352 aa9.68□□□□□ -0.86
VPS18-203ENST00000558855 HOXB5P09067 269 aa9.68□□□□□ -0.86
VPS18-203ENST00000558855 SRPXP78539 464 aa9.68□□□□□ -0.86
VPS18-203ENST00000558855 TMEM128Q5BJH2 165 aa9.68□□□□□ -0.86
VPS18-203ENST00000558855 IGFL4Q6B9Z1 124 aa9.68□□□□□ -0.86
VPS18-203ENST00000558855 NOXA1Q86UR1 476 aa9.68□□□□□ -0.86
VPS18-203ENST00000558855 C1orf158Q8N1D5 194 aa9.68□□□□□ -0.86
VPS18-203ENST00000558855 TOMM5Q8N4H5 51 aa9.68□□□□□ -0.86
VPS18-203ENST00000558855 TRGV9Q99603 122 aa9.68□□□□□ -0.86
VPS18-203ENST00000558855 PAIP2BQ9ULR5 123 aaKnown RBP9.68□□□□□ -0.86
VPS18-203ENST00000558855 IGHV3OR16-12A0A075B7B8 117 aa9.67□□□□□ -0.86
VPS18-203ENST00000558855 DEFB131BA0A096LNP1 70 aa9.67□□□□□ -0.86
VPS18-203ENST00000558855 DUXBA0A1W2PPF3 345 aa9.67□□□□□ -0.86
VPS18-203ENST00000558855 PRM2P04554 102 aa9.67□□□□□ -0.86
VPS18-203ENST00000558855 ANXA3P12429 323 aa9.67□□□□□ -0.86
VPS18-203ENST00000558855 TCTAP57738 103 aa9.67□□□□□ -0.86
VPS18-203ENST00000558855 GGNBP1Q5YKI7 109 aa9.67□□□□□ -0.86
VPS18-203ENST00000558855 RNF126Q9BV68 326 aa9.67□□□□□ -0.86
VPS18-203ENST00000558855 SRRQ9GZT4 340 aa9.67□□□□□ -0.86
VPS18-203ENST00000558855 FLVCR2Q9UPI3 526 aa9.67□□□□□ -0.86
VPS18-203ENST00000558855 ABCA13Q86UQ4 5058 aa9.66□□□□□ -0.86
VPS18-203ENST00000558855 A0A0J9YX75 114 aa9.66□□□□□ -0.86
VPS18-203ENST00000558855 SYNGR2O43760 224 aa9.66□□□□□ -0.86
VPS18-203ENST00000558855 NOL3O60936 208 aaKnown RBP9.66□□□□□ -0.86
VPS18-203ENST00000558855 PSMB3P49720 205 aa9.66□□□□□ -0.86
VPS18-203ENST00000558855 EMP1P54849 157 aa9.66□□□□□ -0.86
VPS18-203ENST00000558855 BAK1Q16611 211 aa9.66□□□□□ -0.86
VPS18-203ENST00000558855 FAM78BQ5VT40 261 aa9.66□□□□□ -0.86
VPS18-203ENST00000558855 AMTNQ6UX39 209 aa9.66□□□□□ -0.86
VPS18-203ENST00000558855 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.66□□□□□ -0.86
VPS18-203ENST00000558855 FOXI2Q6ZQN5 318 aa9.66□□□□□ -0.86
VPS18-203ENST00000558855 NEU1Q99519 415 aa9.66□□□□□ -0.86
VPS18-203ENST00000558855 SDHCQ99643 169 aaPredicted RBP9.66□□□□□ -0.86
VPS18-203ENST00000558855 TRAV8-2A0A0B4J237 113 aa9.65□□□□□ -0.86
VPS18-203ENST00000558855 PMS2P5A8MQ11 134 aa9.65□□□□□ -0.86
VPS18-203ENST00000558855 A8MTW9 85 aa9.65□□□□□ -0.86
VPS18-203ENST00000558855 SLC25A6P12236 298 aa9.65□□□□□ -0.86
VPS18-203ENST00000558855 BTCP35070 178 aa9.65□□□□□ -0.86
VPS18-203ENST00000558855 PAX9P55771 341 aa9.65□□□□□ -0.86
VPS18-203ENST00000558855 POLR2GP62487 172 aaKnown RBP eCLIP9.65□□□□□ -0.86
VPS18-203ENST00000558855 C1orf194Q5T5A4 169 aa9.65□□□□□ -0.86
VPS18-203ENST00000558855 ACOT7LQ6ZUV0 252 aa9.65□□□□□ -0.86
VPS18-203ENST00000558855 CENPSQ8N2Z9 138 aa9.65□□□□□ -0.86
VPS18-203ENST00000558855 OR4B1Q8NGF8 309 aa9.65□□□□□ -0.86
VPS18-203ENST00000558855 C1QTNF4Q9BXJ3 329 aa9.65□□□□□ -0.86
VPS18-203ENST00000558855 SLC25A22Q9H936 323 aa9.65□□□□□ -0.86
VPS18-203ENST00000558855 CACFD1Q9UGQ2 172 aa9.65□□□□□ -0.86
VPS18-203ENST00000558855 A0A1B0GVY2 172 aa9.64□□□□□ -0.87
VPS18-203ENST00000558855 ZNF98A6NK75 572 aa9.64□□□□□ -0.87
VPS18-203ENST00000558855 SNRPGP15A8MWD9 76 aa9.64□□□□□ -0.87
VPS18-203ENST00000558855 FAUP35544 74 aaKnown RBP9.64□□□□□ -0.87
VPS18-203ENST00000558855 ATP5IP56385 69 aaPredicted RBP9.64□□□□□ -0.87
VPS18-203ENST00000558855 SPANXN5Q5MJ07 72 aa9.64□□□□□ -0.87
VPS18-203ENST00000558855 FAM222AQ5U5X8 452 aa9.64□□□□□ -0.87
VPS18-203ENST00000558855 OR8I2Q8N0Y5 310 aa9.64□□□□□ -0.87
VPS18-203ENST00000558855 RNF182Q8N6D2 247 aa9.64□□□□□ -0.87
VPS18-203ENST00000558855 COQ8AQ8NI60 647 aa9.64□□□□□ -0.87
VPS18-203ENST00000558855 CLUHP3Q96NS8 147 aa9.64□□□□□ -0.87
VPS18-203ENST00000558855 SLC25A21Q9BQT8 299 aaPredicted RBP9.64□□□□□ -0.87
VPS18-203ENST00000558855 DOK5Q9P104 306 aa9.64□□□□□ -0.87
VPS18-203ENST00000558855 DKK2Q9UBU2 259 aa9.64□□□□□ -0.87
VPS18-203ENST00000558855 TMED3Q9Y3Q3 217 aa9.64□□□□□ -0.87
VPS18-203ENST00000558855 C9orf170A2RU37 121 aa9.63□□□□□ -0.87
VPS18-203ENST00000558855 H3BRN7 92 aa9.63□□□□□ -0.87
VPS18-203ENST00000558855 ISLRO14498 428 aa9.63□□□□□ -0.87
VPS18-203ENST00000558855 NUP62P37198 522 aaPredicted RBP9.63□□□□□ -0.87
VPS18-203ENST00000558855 AP3S2P59780 193 aa9.63□□□□□ -0.87
VPS18-203ENST00000558855 NUTF2P61970 127 aaKnown RBP9.63□□□□□ -0.87
VPS18-203ENST00000558855 RAB11AP62491 216 aa9.63□□□□□ -0.87
VPS18-203ENST00000558855 OR4D5Q8NGN0 318 aa9.63□□□□□ -0.87
VPS18-203ENST00000558855 PPP1R14BQ96C90 147 aa9.63□□□□□ -0.87
VPS18-203ENST00000558855 RSG1Q9BU20 258 aa9.63□□□□□ -0.87
VPS18-203ENST00000558855 LINC00854A0A1B0GVQ3 168 aa9.62□□□□□ -0.87
VPS18-203ENST00000558855 CCDC160A6NGH7 325 aa9.62□□□□□ -0.87
VPS18-203ENST00000558855 M0R2N4 97 aa9.62□□□□□ -0.87
VPS18-203ENST00000558855 RTL8CO15255 209 aa9.62□□□□□ -0.87
VPS18-203ENST00000558855 CRXO43186 299 aaPredicted RBP9.62□□□□□ -0.87
VPS18-203ENST00000558855 ORM2P19652 201 aa9.62□□□□□ -0.87
VPS18-203ENST00000558855 ID1P41134 155 aa9.62□□□□□ -0.87
VPS18-203ENST00000558855 UBE2MP61081 183 aaKnown RBP9.62□□□□□ -0.87
VPS18-203ENST00000558855 PSG9Q00887 426 aa9.62□□□□□ -0.87
VPS18-203ENST00000558855 ID3Q02535 119 aa9.62□□□□□ -0.87
VPS18-203ENST00000558855 M0R2Z0 102 aa9.61□□□□□ -0.87
VPS18-203ENST00000558855 MED6O75586 246 aa9.61□□□□□ -0.87
VPS18-203ENST00000558855 NDUFB6O95139 128 aa9.61□□□□□ -0.87
VPS18-203ENST00000558855 ANXA7P20073 488 aaKnown RBP9.61□□□□□ -0.87
VPS18-203ENST00000558855 AKR1C1Q04828 323 aa9.61□□□□□ -0.87
VPS18-203ENST00000558855 ARL16Q0P5N6 197 aa9.61□□□□□ -0.87
VPS18-203ENST00000558855 OR1B1Q8NGR6 318 aa9.61□□□□□ -0.87
VPS18-203ENST00000558855 C16orf92Q96LL3 132 aa9.61□□□□□ -0.87
VPS18-203ENST00000558855 UHRF2Q96PU4 802 aa9.61□□□□□ -0.87
VPS18-203ENST00000558855 YTHDF2Q9Y5A9 579 aaKnown RBP9.61□□□□□ -0.87
VPS18-203ENST00000558855 RFNGQ9Y644 331 aa9.61□□□□□ -0.87
VPS18-203ENST00000558855 LOC102723971A0A1B0GUV8 181 aa9.6□□□□□ -0.87
VPS18-203ENST00000558855 SSSCA1O60232 199 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms