RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 OR1B1Q8NGR6 318 aa9.2□□□□□ -0.94
SMAD3-205ENST00000558428 FAM110AQ9BQ89 295 aa9.2□□□□□ -0.94
SMAD3-205ENST00000558428 SLC25A31Q9H0C2 315 aa9.2□□□□□ -0.94
SMAD3-205ENST00000558428 UQCC1Q9NVA1 299 aa9.2□□□□□ -0.94
SMAD3-205ENST00000558428 RBMY1BA6NDE4 496 aaKnown RBP9.19□□□□□ -0.94
SMAD3-205ENST00000558428 RBMY1EA6NEQ0 496 aaKnown RBP9.19□□□□□ -0.94
SMAD3-205ENST00000558428 AGPAT2O15120 278 aa9.19□□□□□ -0.94
SMAD3-205ENST00000558428 MPC2O95563 127 aa9.19□□□□□ -0.94
SMAD3-205ENST00000558428 RBMY1DP0C7P1 496 aaKnown RBP9.19□□□□□ -0.94
SMAD3-205ENST00000558428 CXCL3P19876 107 aa9.19□□□□□ -0.94
SMAD3-205ENST00000558428 CMC4P56277 68 aaPredicted RBP9.19□□□□□ -0.94
SMAD3-205ENST00000558428 EWSR1Q01844 656 aaKnown RBP eCLIP9.19□□□□□ -0.94
SMAD3-205ENST00000558428 OXA1LQ15070 435 aa9.19□□□□□ -0.94
SMAD3-205ENST00000558428 FCN2Q15485 313 aa9.19□□□□□ -0.94
SMAD3-205ENST00000558428 HAGHQ16775 308 aa9.19□□□□□ -0.94
SMAD3-205ENST00000558428 LINC00322Q6ZN03 302 aaPredicted RBP9.19□□□□□ -0.94
SMAD3-205ENST00000558428 STPG3Q8N7X2 389 aa9.19□□□□□ -0.94
SMAD3-205ENST00000558428 CITED4Q96RK1 184 aa9.19□□□□□ -0.94
SMAD3-205ENST00000558428 TMEM147Q9BVK8 224 aa9.19□□□□□ -0.94
SMAD3-205ENST00000558428 MAP6D1Q9H9H5 199 aa9.19□□□□□ -0.94
SMAD3-205ENST00000558428 DOK5Q9P104 306 aa9.19□□□□□ -0.94
SMAD3-205ENST00000558428 SLC45A2Q9UMX9 530 aa9.19□□□□□ -0.94
SMAD3-205ENST00000558428 UBE2L5PA0A1B0GUS4 154 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 K7EQG2 157 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 AGRNO00468 2067 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 S100A7P31151 101 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 RAP2BP61225 183 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 NHLH2Q02577 135 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 BAXQ07812 192 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 ATP6V1FQ16864 119 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 VWC2Q2TAL6 325 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 C1orf194Q5T5A4 169 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 ZNF546Q86UE3 836 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 APRG1Q8IVJ8 170 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 OR8I2Q8N0Y5 310 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 FAM24BQ8N5W8 94 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 OR11H7Q8NGC8 314 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 MGST2Q99735 147 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 RNF126Q9BV68 326 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 ZMAT4Q9H898 229 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 SLC25A22Q9H936 323 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 FBXL17Q9UF56 701 aa9.18□□□□□ -0.94
SMAD3-205ENST00000558428 LOC102724200A0A096LPH7 203 aaPredicted RBP9.17□□□□□ -0.94
SMAD3-205ENST00000558428 ZNF98A6NK75 572 aa9.17□□□□□ -0.94
SMAD3-205ENST00000558428 HYPMO75409 117 aa9.17□□□□□ -0.94
SMAD3-205ENST00000558428 OR5G3P0C626 314 aa9.17□□□□□ -0.94
SMAD3-205ENST00000558428 ZNF688P0C7X2 276 aa9.17□□□□□ -0.94
SMAD3-205ENST00000558428 CAMLGP49069 296 aa9.17□□□□□ -0.94
SMAD3-205ENST00000558428 DEFB131AP59861 70 aa9.17□□□□□ -0.94
SMAD3-205ENST00000558428 PLP1P60201 277 aa9.17□□□□□ -0.94
SMAD3-205ENST00000558428 RAB31Q13636 194 aa9.17□□□□□ -0.94
SMAD3-205ENST00000558428 ZNF124Q15973 351 aa9.17□□□□□ -0.94
SMAD3-205ENST00000558428 OR5C1Q8NGR4 320 aa9.17□□□□□ -0.94
SMAD3-205ENST00000558428 DCANP1Q8TF63 244 aa9.17□□□□□ -0.94
SMAD3-205ENST00000558428 TM2D3Q9BRN9 247 aa9.17□□□□□ -0.94
SMAD3-205ENST00000558428 GGTLC1Q9BX51 225 aa9.17□□□□□ -0.94
SMAD3-205ENST00000558428 ARL6Q9H0F7 186 aa9.17□□□□□ -0.94
SMAD3-205ENST00000558428 NRN1Q9NPD7 142 aa9.17□□□□□ -0.94
SMAD3-205ENST00000558428 MBD2Q9UBB5 411 aa9.17□□□□□ -0.94
SMAD3-205ENST00000558428 HIGD1AQ9Y241 93 aa9.17□□□□□ -0.94
SMAD3-205ENST00000558428 WDR83OSQ9Y284 106 aa9.17□□□□□ -0.94
SMAD3-205ENST00000558428 U3KQK5 164 aa9.17□□□□□ -0.94
SMAD3-205ENST00000558428 H3BRN7 92 aa9.16□□□□□ -0.94
SMAD3-205ENST00000558428 FGF7P21781 194 aa9.16□□□□□ -0.94
SMAD3-205ENST00000558428 CLINT1Q14677 625 aa9.16□□□□□ -0.94
SMAD3-205ENST00000558428 LEMD1Q68G75 181 aa9.16□□□□□ -0.94
SMAD3-205ENST00000558428 S100A7AQ86SG5 101 aa9.16□□□□□ -0.94
SMAD3-205ENST00000558428 SPATA25Q9BR10 227 aa9.16□□□□□ -0.94
SMAD3-205ENST00000558428 SLC25A39Q9BZJ4 359 aaPredicted RBP9.16□□□□□ -0.94
SMAD3-205ENST00000558428 NBEAL2Q6ZNJ1 2754 aa9.16□□□□□ -0.94
SMAD3-205ENST00000558428 RPL35AP18077 110 aaKnown RBP9.15□□□□□ -0.94
SMAD3-205ENST00000558428 RPL12P30050 165 aaKnown RBP9.15□□□□□ -0.94
SMAD3-205ENST00000558428 GALR1P47211 349 aa9.15□□□□□ -0.94
SMAD3-205ENST00000558428 PXDC1Q5TGL8 231 aa9.15□□□□□ -0.94
SMAD3-205ENST00000558428 THAP6Q8TBB0 222 aa9.15□□□□□ -0.94
SMAD3-205ENST00000558428 RCHY1Q96PM5 261 aa9.15□□□□□ -0.94
SMAD3-205ENST00000558428 UHRF2Q96PU4 802 aa9.15□□□□□ -0.94
SMAD3-205ENST00000558428 SHANK2-AS3Q9BTD1 123 aa9.15□□□□□ -0.94
SMAD3-205ENST00000558428 SCRT1Q9BWW7 348 aa9.15□□□□□ -0.94
SMAD3-205ENST00000558428 ARV1Q9H2C2 271 aa9.15□□□□□ -0.94
SMAD3-205ENST00000558428 SLC25A32Q9H2D1 315 aa9.15□□□□□ -0.94
SMAD3-205ENST00000558428 TENM3Q9P273 2699 aa9.14□□□□□ -0.95
SMAD3-205ENST00000558428 COX7A2P2O60397 106 aa9.14□□□□□ -0.95
SMAD3-205ENST00000558428 MPDU1O75352 247 aa9.14□□□□□ -0.95
SMAD3-205ENST00000558428 GIPP09681 153 aaPredicted RBP9.14□□□□□ -0.95
SMAD3-205ENST00000558428 LYL1P12980 280 aa9.14□□□□□ -0.95
SMAD3-205ENST00000558428 B2MP61769 119 aa9.14□□□□□ -0.95
SMAD3-205ENST00000558428 SNRPD3P62318 126 aaKnown RBP9.14□□□□□ -0.95
SMAD3-205ENST00000558428 OPCMLQ14982 345 aa9.14□□□□□ -0.95
SMAD3-205ENST00000558428 PSMG4Q5JS54 123 aa9.14□□□□□ -0.95
SMAD3-205ENST00000558428 MIC13Q5XKP0 118 aa9.14□□□□□ -0.95
SMAD3-205ENST00000558428 PATE2Q6UY27 113 aa9.14□□□□□ -0.95
SMAD3-205ENST00000558428 Q6ZRG5 221 aa9.14□□□□□ -0.95
SMAD3-205ENST00000558428 GPR82Q96P67 336 aa9.14□□□□□ -0.95
SMAD3-205ENST00000558428 HSPB11Q9Y547 144 aa9.14□□□□□ -0.95
SMAD3-205ENST00000558428 STAB2Q8WWQ8 2551 aa9.13□□□□□ -0.95
SMAD3-205ENST00000558428 RPL29P47914 159 aaKnown RBP9.13□□□□□ -0.95
SMAD3-205ENST00000558428 APOC4P55056 127 aa9.13□□□□□ -0.95
SMAD3-205ENST00000558428 PRR20EP86478 221 aa9.13□□□□□ -0.95
SMAD3-205ENST00000558428 PRR20CP86479 221 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms