RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 WFDC10AQ9H1F0 79 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 MGAT4CQ9UBM8 478 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 UBQLN2Q9UHD9 624 aa6.3□□□□□ -1.4
TPM1-213ENST00000558400 IGKV1OR2-108A0A075B7D4 117 aa6.29□□□□□ -1.4
TPM1-213ENST00000558400 PMS2P5A8MQ11 134 aa6.29□□□□□ -1.4
TPM1-213ENST00000558400 H3BP45 60 aa6.29□□□□□ -1.4
TPM1-213ENST00000558400 K7EQG2 157 aa6.29□□□□□ -1.4
TPM1-213ENST00000558400 DEDDO75618 318 aa6.29□□□□□ -1.4
TPM1-213ENST00000558400 METTL15P1P0C7V9 234 aa6.29□□□□□ -1.4
TPM1-213ENST00000558400 LYZP61626 148 aa6.29□□□□□ -1.4
TPM1-213ENST00000558400 SNRPD3P62318 126 aaKnown RBP6.29□□□□□ -1.4
TPM1-213ENST00000558400 RAB31Q13636 194 aa6.29□□□□□ -1.4
TPM1-213ENST00000558400 SAMD13Q5VXD3 122 aa6.29□□□□□ -1.4
TPM1-213ENST00000558400 TEPPQ6URK8 271 aa6.29□□□□□ -1.4
TPM1-213ENST00000558400 SIGLEC15Q6ZMC9 328 aa6.29□□□□□ -1.4
TPM1-213ENST00000558400 ACOT7LQ6ZUV0 252 aa6.29□□□□□ -1.4
TPM1-213ENST00000558400 STXBP6Q8NFX7 210 aa6.29□□□□□ -1.4
TPM1-213ENST00000558400 IL17DQ8TAD2 202 aa6.29□□□□□ -1.4
TPM1-213ENST00000558400 GLMPQ8WWB7 406 aa6.29□□□□□ -1.4
TPM1-213ENST00000558400 PPP1R14BQ96C90 147 aa6.29□□□□□ -1.4
TPM1-213ENST00000558400 CSTL1Q9H114 145 aa6.29□□□□□ -1.4
TPM1-213ENST00000558400 TP53TG1Q9Y2A0 90 aa6.29□□□□□ -1.4
TPM1-213ENST00000558400 TENM2Q9NT68 2774 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 SMCO3A2RU48 225 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 K7EPK0 472 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 CCSO14618 274 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 S100A11P31949 105 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 ID1P41134 155 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 BCAP31P51572 246 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 DEFB131AP59861 70 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 IL15RAQ13261 267 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 OR2F1Q13607 317 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 PXDC1Q5TGL8 231 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 CYP2G1PQ6ZSU1 146 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 APRG1Q8IVJ8 170 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 OR8I2Q8N0Y5 310 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 DCANP1Q8TF63 244 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 GPR82Q96P67 336 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 TMEM147Q9BVK8 224 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 NMES1Q9C002 83 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 MAP6D1Q9H9H5 199 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 NRN1Q9NPD7 142 aa6.28□□□□□ -1.4
TPM1-213ENST00000558400 RCL1Q9Y2P8 373 aaKnown RBP6.28□□□□□ -1.4
TPM1-213ENST00000558400 LSM5Q9Y4Y9 91 aaKnown RBP6.28□□□□□ -1.4
TPM1-213ENST00000558400 hCG_2014768A0A024R1R8 64 aa6.27□□□□□ -1.41
TPM1-213ENST00000558400 A0A1B0GVG6 124 aa6.27□□□□□ -1.41
TPM1-213ENST00000558400 GOSR2O14653 212 aa6.27□□□□□ -1.41
TPM1-213ENST00000558400 SPRY2O43597 315 aa6.27□□□□□ -1.41
TPM1-213ENST00000558400 HYPMO75409 117 aa6.27□□□□□ -1.41
TPM1-213ENST00000558400 ORM2P19652 201 aa6.27□□□□□ -1.41
TPM1-213ENST00000558400 GALR1P47211 349 aa6.27□□□□□ -1.41
TPM1-213ENST00000558400 MEOX2P50222 304 aa6.27□□□□□ -1.41
TPM1-213ENST00000558400 CAV2P51636 162 aa6.27□□□□□ -1.41
TPM1-213ENST00000558400 PLP1P60201 277 aa6.27□□□□□ -1.41
TPM1-213ENST00000558400 RAP2BP61225 183 aa6.27□□□□□ -1.41
TPM1-213ENST00000558400 RRAS2P62070 204 aaPredicted RBP6.27□□□□□ -1.41
TPM1-213ENST00000558400 HBG1P69891 147 aa6.27□□□□□ -1.41
TPM1-213ENST00000558400 HBG2P69892 147 aa6.27□□□□□ -1.41
TPM1-213ENST00000558400 ATP6V1FQ16864 119 aa6.27□□□□□ -1.41
TPM1-213ENST00000558400 TMEM41BQ5BJD5 291 aa6.27□□□□□ -1.41
TPM1-213ENST00000558400 STHQ8IWL8 128 aa6.27□□□□□ -1.41
TPM1-213ENST00000558400 MUC7Q8TAX7 377 aa6.27□□□□□ -1.41
TPM1-213ENST00000558400 LOC100996750A0A140TA64 210 aa6.26□□□□□ -1.41
TPM1-213ENST00000558400 ZNF98A6NK75 572 aa6.26□□□□□ -1.41
TPM1-213ENST00000558400 E5RGE8 158 aa6.26□□□□□ -1.41
TPM1-213ENST00000558400 LYL1P12980 280 aa6.26□□□□□ -1.41
TPM1-213ENST00000558400 RPL35AP18077 110 aaKnown RBP6.26□□□□□ -1.41
TPM1-213ENST00000558400 SULT1A1P50225 295 aa6.26□□□□□ -1.41
TPM1-213ENST00000558400 S100A10P60903 97 aa6.26□□□□□ -1.41
TPM1-213ENST00000558400 NUTF2P61970 127 aaKnown RBP6.26□□□□□ -1.41
TPM1-213ENST00000558400 RAB32Q13637 225 aa6.26□□□□□ -1.41
TPM1-213ENST00000558400 MORN3Q6PF18 240 aaPredicted RBP6.26□□□□□ -1.41
TPM1-213ENST00000558400 ZNF546Q86UE3 836 aa6.26□□□□□ -1.41
TPM1-213ENST00000558400 STX12Q86Y82 276 aa6.26□□□□□ -1.41
TPM1-213ENST00000558400 OR1B1Q8NGR6 318 aa6.26□□□□□ -1.41
TPM1-213ENST00000558400 GATAD1Q8WUU5 269 aa6.26□□□□□ -1.41
TPM1-213ENST00000558400 RNF183Q96D59 192 aa6.26□□□□□ -1.41
TPM1-213ENST00000558400 OVOL2Q9BRP0 275 aa6.26□□□□□ -1.41
TPM1-213ENST00000558400 KRTAP4-6Q9BYQ5 205 aa6.26□□□□□ -1.41
TPM1-213ENST00000558400 SLC25A31Q9H0C2 315 aa6.26□□□□□ -1.41
TPM1-213ENST00000558400 EDA2RQ9HAV5 297 aa6.26□□□□□ -1.41
TPM1-213ENST00000558400 LYRM2Q9NU23 88 aaPredicted RBP6.26□□□□□ -1.41
TPM1-213ENST00000558400 HIGD1AQ9Y241 93 aa6.26□□□□□ -1.41
TPM1-213ENST00000558400 DNAH1Q9P2D7 4330 aa6.26□□□□□ -1.41
TPM1-213ENST00000558400 ELOA3CA0A087WX78 387 aaPredicted RBP6.25□□□□□ -1.41
TPM1-213ENST00000558400 FAM24AA6NFZ4 105 aa6.25□□□□□ -1.41
TPM1-213ENST00000558400 ISLRO14498 428 aa6.25□□□□□ -1.41
TPM1-213ENST00000558400 SSNA1O43805 119 aa6.25□□□□□ -1.41
TPM1-213ENST00000558400 ZNF688P0C7X2 276 aa6.25□□□□□ -1.41
TPM1-213ENST00000558400 LINC00869P0C866 280 aa6.25□□□□□ -1.41
TPM1-213ENST00000558400 SPP1P10451 314 aa6.25□□□□□ -1.41
TPM1-213ENST00000558400 RPL7P18124 248 aaKnown RBP6.25□□□□□ -1.41
TPM1-213ENST00000558400 GATA2P23769 480 aaPredicted RBP6.25□□□□□ -1.41
TPM1-213ENST00000558400 SLC38A11Q08AI6 406 aa6.25□□□□□ -1.41
TPM1-213ENST00000558400 ARL16Q0P5N6 197 aa6.25□□□□□ -1.41
TPM1-213ENST00000558400 SPATA31B1PQ5VZV4 182 aa6.25□□□□□ -1.41
TPM1-213ENST00000558400 LEMD1Q68G75 181 aa6.25□□□□□ -1.41
TPM1-213ENST00000558400 Q6ZRG5 221 aa6.25□□□□□ -1.41
TPM1-213ENST00000558400 TMEM252Q8N6L7 170 aa6.25□□□□□ -1.41
TPM1-213ENST00000558400 CHAC2Q8WUX2 184 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms