RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 SLC25A4P12235 298 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 NPY1RP25929 384 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 GUCA1AP43080 201 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-212ENST00000557477 UBE2AP49459 152 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 TAS2R20P59543 309 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 MEF2BQ02080 365 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-212ENST00000557477 ENDOGQ14249 297 aaKnown RBP2.92□□□□□ -1.94
PRPF39-212ENST00000557477 GGTLC2Q14390 218 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 GINS1Q14691 196 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 ELOBQ15370 118 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 SSX1Q16384 188 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 TDRG1Q3Y452 100 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 TMEM97Q5BJF2 176 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 SPANXN3Q5MJ09 141 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 ZFAND6Q6FIF0 208 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 TMEM91Q6ZNR0 172 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 C16orf47Q6ZP98 133 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-212ENST00000557477 ZNF567Q8N184 647 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 TOMM5Q8N4H5 51 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 COX18Q8N8Q8 333 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 WFDC11Q8NEX6 87 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 NOXO1Q8NFA2 376 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 OR5A1Q8NGJ0 315 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 OR51A2Q8NGJ7 313 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 MFSD8Q8NHS3 518 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 SLAMF6Q96DU3 332 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 OR4K3Q96R72 315 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 IMMP2LQ96T52 175 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 HSPB9Q9BQS6 159 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 SPANXCQ9NY87 97 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 FUT9Q9Y231 359 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 CYSLTR1Q9Y271 337 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 KLF13Q9Y2Y9 288 aaPredicted RBP2.92□□□□□ -1.94
PRPF39-212ENST00000557477 PIKFYVEQ9Y2I7 2098 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 PCNX1Q96RV3 2341 aa2.92□□□□□ -1.94
PRPF39-212ENST00000557477 HIVEP1P15822 2718 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 IGLV11-55A0A075B6I3 123 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 IGHV2-26A0A0B4J1V2 119 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 KBTBD11-OT1A0A1B0GTJ5 212 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 LOC285095A0A1B0GVY8 99 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 IGLC7A0M8Q6 106 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 ZNF860A6NHJ4 632 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 FAM159BA6NKW6 160 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 FABP5P3A8MUU1 101 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 UMAD1C9J7I0 102 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 K7EN84 100 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 APOC4-APOC2K7ER74 178 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 M0R2Z0 102 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 GEMIN2O14893 280 aaKnown RBP2.91□□□□□ -1.94
PRPF39-212ENST00000557477 REM1O75628 298 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 FCN3O75636 299 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 PROSCO94903 275 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 PTHP01270 115 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 DBIP07108 87 aaKnown RBP2.91□□□□□ -1.94
PRPF39-212ENST00000557477 CXCL1P09341 107 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 AKAIN1P0CW23 69 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 PEBP1P30086 187 aaKnown RBP2.91□□□□□ -1.94
PRPF39-212ENST00000557477 RPL22P35268 128 aaKnown RBP2.91□□□□□ -1.94
PRPF39-212ENST00000557477 MARCKSL1P49006 195 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 SULT1A2P50226 295 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 FOXA1P55317 472 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 UBE2NP61088 152 aaKnown RBP2.91□□□□□ -1.94
PRPF39-212ENST00000557477 EDDM3AQ14507 147 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 IHHQ14623 411 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 DEFB113Q30KQ7 82 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 ACOT6Q3I5F7 207 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-212ENST00000557477 TSPO2Q5TGU0 170 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 AADACL3Q5VUY0 350 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 SPATA31B1PQ5VZV4 182 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 AMMECR1LQ6DCA0 310 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 DUX4L9Q6RFH8 374 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-212ENST00000557477 FOXI2Q6ZQN5 318 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 CALHM3Q86XJ0 350 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 CA13Q8N1Q1 262 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 LRRC25Q8N386 305 aaPredicted RBP2.91□□□□□ -1.94
PRPF39-212ENST00000557477 Q8N976 141 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 GPR32P1Q8NGA4 272 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 FAM57AQ8TBR7 257 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 PP6455Q8WZ26 134 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 SMIM19Q96E16 107 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 TBL1YQ9BQ87 522 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 SMDT1Q9H4I9 107 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 BANF2Q9H503 90 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 POPDC3Q9HBV1 291 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 PARP11Q9NR21 331 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 CA10Q9NS85 328 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 NDUFB11Q9NX14 153 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 TAS2R5Q9NYW4 299 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 CCDC167Q9P0B6 97 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 TAC3Q9UHF0 121 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 SVILO95425 2214 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 MED13LQ71F56 2210 aa2.91□□□□□ -1.94
PRPF39-212ENST00000557477 NUP210LQ5VU65 1888 aa2.9□□□□□ -1.94
PRPF39-212ENST00000557477 MTORP42345 2549 aa2.9□□□□□ -1.94
PRPF39-212ENST00000557477 TRAV36DV7A0A075B6V5 113 aa2.9□□□□□ -1.95
PRPF39-212ENST00000557477 TRBV9A0A0B4J1U6 114 aa2.9□□□□□ -1.95
PRPF39-212ENST00000557477 TINCRA0A1B0GVN0 87 aa2.9□□□□□ -1.95
PRPF39-212ENST00000557477 hADV38S2A0JD32 116 aa2.9□□□□□ -1.95
PRPF39-212ENST00000557477 ODAMA1E959 279 aa2.9□□□□□ -1.95
PRPF39-212ENST00000557477 A6NDN8 102 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms