RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 H0YIZ8 118 aa10.27□□□□□ -0.77
VPS33B-206ENST00000557358 SMLR1H3BR10 107 aa10.27□□□□□ -0.77
VPS33B-206ENST00000557358 LYL1P12980 280 aa10.27□□□□□ -0.77
VPS33B-206ENST00000557358 RPL35AP18077 110 aaKnown RBP10.27□□□□□ -0.77
VPS33B-206ENST00000557358 SNRPD3P62318 126 aaKnown RBP10.27□□□□□ -0.77
VPS33B-206ENST00000557358 CD300CQ08708 224 aa10.27□□□□□ -0.77
VPS33B-206ENST00000557358 STHQ8IWL8 128 aa10.27□□□□□ -0.77
VPS33B-206ENST00000557358 BPIFCQ8NFQ6 507 aa10.27□□□□□ -0.77
VPS33B-206ENST00000557358 ZNF414Q96IQ9 312 aa10.27□□□□□ -0.77
VPS33B-206ENST00000557358 C11orf1Q9H5F2 150 aa10.27□□□□□ -0.77
VPS33B-206ENST00000557358 MAP6D1Q9H9H5 199 aa10.27□□□□□ -0.77
VPS33B-206ENST00000557358 TSC22D2O75157 780 aa10.26□□□□□ -0.77
VPS33B-206ENST00000557358 DEFB131AP59861 70 aa10.26□□□□□ -0.77
VPS33B-206ENST00000557358 OR2F1Q13607 317 aa10.26□□□□□ -0.77
VPS33B-206ENST00000557358 USF2Q15853 346 aaPredicted RBP10.26□□□□□ -0.77
VPS33B-206ENST00000557358 Q5BKY6 102 aa10.26□□□□□ -0.77
VPS33B-206ENST00000557358 C16orf54Q6UWD8 224 aa10.26□□□□□ -0.77
VPS33B-206ENST00000557358 SIGLEC15Q6ZMC9 328 aa10.26□□□□□ -0.77
VPS33B-206ENST00000557358 Q6ZWC4 215 aa10.26□□□□□ -0.77
VPS33B-206ENST00000557358 APRG1Q8IVJ8 170 aa10.26□□□□□ -0.77
VPS33B-206ENST00000557358 THAP8Q8NA92 274 aa10.26□□□□□ -0.77
VPS33B-206ENST00000557358 TP53TG1Q9Y2A0 90 aa10.26□□□□□ -0.77
VPS33B-206ENST00000557358 U3KQE9 123 aa10.26□□□□□ -0.77
VPS33B-206ENST00000557358 STAB2Q8WWQ8 2551 aa10.25□□□□□ -0.77
VPS33B-206ENST00000557358 FXYD6-FXYD2A0A087WZ82 144 aa10.25□□□□□ -0.77
VPS33B-206ENST00000557358 C1QBP02746 253 aa10.25□□□□□ -0.77
VPS33B-206ENST00000557358 PAX9P55771 341 aa10.25□□□□□ -0.77
VPS33B-206ENST00000557358 ZNF90Q03938 601 aa10.25□□□□□ -0.77
VPS33B-206ENST00000557358 C1orf194Q5T5A4 169 aa10.25□□□□□ -0.77
VPS33B-206ENST00000557358 SAMD13Q5VXD3 122 aa10.25□□□□□ -0.77
VPS33B-206ENST00000557358 ACOT7LQ6ZUV0 252 aa10.25□□□□□ -0.77
VPS33B-206ENST00000557358 TMEM144Q7Z5S9 345 aa10.25□□□□□ -0.77
VPS33B-206ENST00000557358 LILRB2Q8N423 598 aa10.25□□□□□ -0.77
VPS33B-206ENST00000557358 RNF126Q9BV68 326 aa10.25□□□□□ -0.77
VPS33B-206ENST00000557358 CSTL1Q9H114 145 aa10.25□□□□□ -0.77
VPS33B-206ENST00000557358 RETNQ9HD89 108 aa10.25□□□□□ -0.77
VPS33B-206ENST00000557358 NRN1Q9NPD7 142 aa10.25□□□□□ -0.77
VPS33B-206ENST00000557358 RNF24Q9Y225 148 aa10.25□□□□□ -0.77
VPS33B-206ENST00000557358 K7EQG2 157 aa10.24□□□□□ -0.77
VPS33B-206ENST00000557358 SPRY2O43597 315 aa10.24□□□□□ -0.77
VPS33B-206ENST00000557358 BUB3O43684 328 aa10.24□□□□□ -0.77
VPS33B-206ENST00000557358 METTL15P1P0C7V9 234 aa10.24□□□□□ -0.77
VPS33B-206ENST00000557358 ID1P41134 155 aa10.24□□□□□ -0.77
VPS33B-206ENST00000557358 CAV2P51636 162 aa10.24□□□□□ -0.77
VPS33B-206ENST00000557358 SELENOTP62341 195 aa10.24□□□□□ -0.77
VPS33B-206ENST00000557358 DLK1P80370 383 aa10.24□□□□□ -0.77
VPS33B-206ENST00000557358 ZFP69Q49AA0 526 aa10.24□□□□□ -0.77
VPS33B-206ENST00000557358 OR8I2Q8N0Y5 310 aa10.24□□□□□ -0.77
VPS33B-206ENST00000557358 GLMPQ8WWB7 406 aa10.24□□□□□ -0.77
VPS33B-206ENST00000557358 TMEM147Q9BVK8 224 aa10.24□□□□□ -0.77
VPS33B-206ENST00000557358 NPVFQ9HCQ7 196 aa10.24□□□□□ -0.77
VPS33B-206ENST00000557358 SEPSECSQ9HD40 501 aaKnown RBP10.24□□□□□ -0.77
VPS33B-206ENST00000557358 LYRM2Q9NU23 88 aaPredicted RBP10.24□□□□□ -0.77
VPS33B-206ENST00000557358 SLC45A2Q9UMX9 530 aa10.24□□□□□ -0.77
VPS33B-206ENST00000557358 IGKV1D-37A0A075B6S9 117 aa10.23□□□□□ -0.77
VPS33B-206ENST00000557358 FNDC10F2Z333 226 aa10.23□□□□□ -0.77
VPS33B-206ENST00000557358 ZNF688P0C7X2 276 aa10.23□□□□□ -0.77
VPS33B-206ENST00000557358 GALR1P47211 349 aa10.23□□□□□ -0.77
VPS33B-206ENST00000557358 RAB31Q13636 194 aa10.23□□□□□ -0.77
VPS33B-206ENST00000557358 TMEM14EPQ6UXP3 125 aa10.23□□□□□ -0.77
VPS33B-206ENST00000557358 TMEM217Q8N7C4 229 aa10.23□□□□□ -0.77
VPS33B-206ENST00000557358 GGACTQ9BVM4 153 aa10.23□□□□□ -0.77
VPS33B-206ENST00000557358 FAM24AA6NFZ4 105 aa10.22□□□□□ -0.77
VPS33B-206ENST00000557358 PRSS46E5RG02 174 aa10.22□□□□□ -0.77
VPS33B-206ENST00000557358 ORM2P19652 201 aa10.22□□□□□ -0.77
VPS33B-206ENST00000557358 DEFB135Q30KP9 77 aa10.22□□□□□ -0.77
VPS33B-206ENST00000557358 TMEM41BQ5BJD5 291 aa10.22□□□□□ -0.77
VPS33B-206ENST00000557358 LEMD1Q68G75 181 aa10.22□□□□□ -0.77
VPS33B-206ENST00000557358 TEPPQ6URK8 271 aa10.22□□□□□ -0.77
VPS33B-206ENST00000557358 ZNF546Q86UE3 836 aa10.22□□□□□ -0.77
VPS33B-206ENST00000557358 OR11H4Q8NGC9 324 aa10.22□□□□□ -0.77
VPS33B-206ENST00000557358 OR1B1Q8NGR6 318 aa10.22□□□□□ -0.77
VPS33B-206ENST00000557358 GATAD1Q8WUU5 269 aa10.22□□□□□ -0.77
VPS33B-206ENST00000557358 GPR82Q96P67 336 aa10.22□□□□□ -0.77
VPS33B-206ENST00000557358 OVOL2Q9BRP0 275 aa10.22□□□□□ -0.77
VPS33B-206ENST00000557358 SLC25A31Q9H0C2 315 aa10.22□□□□□ -0.77
VPS33B-206ENST00000557358 EDA2RQ9HAV5 297 aa10.22□□□□□ -0.77
VPS33B-206ENST00000557358 TNFSF18Q9UNG2 199 aa10.22□□□□□ -0.77
VPS33B-206ENST00000557358 TENM3Q9P273 2699 aa10.22□□□□□ -0.77
VPS33B-206ENST00000557358 NBEAL2Q6ZNJ1 2754 aa10.21□□□□□ -0.77
VPS33B-206ENST00000557358 IGSF23A1L1A6 192 aa10.21□□□□□ -0.77
VPS33B-206ENST00000557358 HMSDA8MTL9 139 aa10.21□□□□□ -0.77
VPS33B-206ENST00000557358 ARPC5O15511 151 aa10.21□□□□□ -0.77
VPS33B-206ENST00000557358 RPL12P30050 165 aaKnown RBP10.21□□□□□ -0.77
VPS33B-206ENST00000557358 MEOX2P50222 304 aa10.21□□□□□ -0.77
VPS33B-206ENST00000557358 NUTF2P61970 127 aaKnown RBP10.21□□□□□ -0.77
VPS33B-206ENST00000557358 HBG1P69891 147 aa10.21□□□□□ -0.77
VPS33B-206ENST00000557358 HBG2P69892 147 aa10.21□□□□□ -0.77
VPS33B-206ENST00000557358 EWSR1Q01844 656 aaKnown RBP eCLIP10.21□□□□□ -0.77
VPS33B-206ENST00000557358 PSMG4Q5JS54 123 aa10.21□□□□□ -0.77
VPS33B-206ENST00000557358 MORN3Q6PF18 240 aaPredicted RBP10.21□□□□□ -0.77
VPS33B-206ENST00000557358 CYP2G1PQ6ZSU1 146 aa10.21□□□□□ -0.77
VPS33B-206ENST00000557358 STX12Q86Y82 276 aa10.21□□□□□ -0.77
VPS33B-206ENST00000557358 TMEM252Q8N6L7 170 aa10.21□□□□□ -0.77
VPS33B-206ENST00000557358 INO80EQ8NBZ0 244 aaPredicted RBP10.21□□□□□ -0.77
VPS33B-206ENST00000557358 DCANP1Q8TF63 244 aa10.21□□□□□ -0.77
VPS33B-206ENST00000557358 HYLS1Q96M11 299 aa10.21□□□□□ -0.77
VPS33B-206ENST00000557358 AQP10Q96PS8 301 aa10.21□□□□□ -0.77
VPS33B-206ENST00000557358 IGKV1OR2-108A0A075B7D4 117 aa10.2□□□□□ -0.78
VPS33B-206ENST00000557358 RNF222A6NCQ9 220 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms