RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 RGPD4Q7Z3J3 1758 aa2.63□□□□□ -1.99
PRPF39-210ENST00000556718 YLPM1P49750 1951 aaKnown RBP2.63□□□□□ -1.99
PRPF39-210ENST00000556718 CHD5Q8TDI0 1954 aa2.63□□□□□ -1.99
PRPF39-210ENST00000556718 CITO14578 2027 aa2.63□□□□□ -1.99
PRPF39-210ENST00000556718 SSC5DA1L4H1 1573 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 A0A087WUU8 490 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 KIR2DS1A0A191URI9 304 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 LOC389332A0A1B0GUA5 103 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 DPRXA6NFQ7 191 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 OR4C45A6NMZ5 311 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 CD300LBA8K4G0 201 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 C17orf112F2Z3M2 114 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 KLRC4-KLRK1H3BQV0 150 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 CCL22O00626 93 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 GNG7O60262 68 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 DEDDO75618 318 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 CDS2O95674 445 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 PFN1P07737 140 aaKnown RBP2.62□□□□□ -1.99
PRPF39-210ENST00000556718 GNG4P50150 75 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 CRYBA4P53673 196 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 FXYD6P3P58550 94 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 ERVS71-1P61550 626 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 FKBP1AP62942 108 aaKnown RBP2.62□□□□□ -1.99
PRPF39-210ENST00000556718 SEC11AP67812 179 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 EIF4EBP1Q13541 118 aaPredicted RBP2.62□□□□□ -1.99
PRPF39-210ENST00000556718 LTC4SQ16873 150 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 MPV17LQ2QL34 196 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 TMEM249Q2WGJ8 235 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 SPIN3Q5JUX0 258 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 AMMECR1LQ6DCA0 310 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 UNQ9165/PRO28630Q6UXU0 137 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 S100A7AQ86SG5 101 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 TRAPPC6BQ86SZ2 158 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 LRP11Q86VZ4 500 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 FER1L6-AS1Q8NA97 138 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 GPR32P1Q8NGA4 272 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 OR5H2Q8NGV7 314 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 OR5AK3PQ8NH89 298 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 OR2AE1Q8NHA4 323 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 RNF133Q8WVZ7 376 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 RAB8BQ92930 207 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 DDIT4LQ96D03 193 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 ABHD14BQ96IU4 210 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 SLC35G5Q96KT7 338 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 PGLYRP3Q96LB9 341 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 HSPB9Q9BQS6 159 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 PLEKHJ1Q9NW61 149 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 FAM206AQ9NX38 181 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 AK3Q9UIJ7 227 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 MED31Q9Y3C7 131 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 ZNF780BQ9Y6R6 833 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 DOCK1Q14185 1865 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 NRAPQ86VF7 1730 aa2.62□□□□□ -1.99
PRPF39-210ENST00000556718 PATJQ8NI35 1801 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 TMEM131Q92545 1883 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 IGHV2-26A0A0B4J1V2 119 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 A0A0G2JMM0 328 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 A0A1W2PPB8 328 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 IGLC7A0M8Q6 106 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 CPSF4LA6NMK7 179 aaKnown RBP2.61□□□□□ -1.99
PRPF39-210ENST00000556718 KIR3DP1A8MWS1 328 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 TMEM250H0YL14 139 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 HYPMO75409 117 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 MT-ND6P03923 174 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 IGLC2P0DOY2 106 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 IGLC3P0DOY3 106 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 ZNF32P17041 273 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 GZMHP20718 246 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 PRTN3P24158 256 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 ATP6V0CP27449 155 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 TSPOP30536 169 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 MPV17P39210 176 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 HINT1P49773 126 aaPredicted RBP2.61□□□□□ -1.99
PRPF39-210ENST00000556718 CMC4P56277 68 aaPredicted RBP2.61□□□□□ -1.99
PRPF39-210ENST00000556718 TCL1AP56279 114 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 TAS2R30P59541 319 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 KRTDAPP60985 99 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 RPS11P62280 158 aaKnown RBP eCLIP2.61□□□□□ -1.99
PRPF39-210ENST00000556718 AESQ08117 197 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 Q0VG73 95 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 IHHQ14623 411 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 PSMG4Q5JS54 123 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 MORN3Q6PF18 240 aaPredicted RBP2.61□□□□□ -1.99
PRPF39-210ENST00000556718 CYP2G1PQ6ZSU1 146 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 OR8I2Q8N0Y5 310 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 OR51T1Q8NGJ9 327 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 CLDND2Q8NHS1 167 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 ZNF563Q8TA94 476 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 SMIM7Q9BQ49 75 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 DERL1Q9BUN8 251 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 SCRT1Q9BWW7 348 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 PLA2G12AQ9BZM1 189 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 LPAR5Q9H1C0 372 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 ST20Q9HBF5 79 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 MRPL16Q9NX20 251 aaKnown RBP2.61□□□□□ -1.99
PRPF39-210ENST00000556718 LSM5Q9Y4Y9 91 aaKnown RBP2.61□□□□□ -1.99
PRPF39-210ENST00000556718 LY75O60449 1722 aa2.61□□□□□ -1.99
PRPF39-210ENST00000556718 IGLV3-12A0A075B6K2 115 aa2.6□□□□□ -1.99
PRPF39-210ENST00000556718 CEACAM18A8MTB9 384 aa2.6□□□□□ -1.99
PRPF39-210ENST00000556718 CEBPZOSA8MTT3 80 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms