RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 SAMD13Q5VXD3 122 aa9.66□□□□□ -0.86
ACTN1-219ENST00000556432 SNX29P2Q8IUI4 249 aa9.66□□□□□ -0.86
ACTN1-219ENST00000556432 ZNF486Q96H40 463 aaPredicted RBP9.66□□□□□ -0.86
ACTN1-219ENST00000556432 C20orf173Q96LM9 149 aa9.66□□□□□ -0.86
ACTN1-219ENST00000556432 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.66□□□□□ -0.86
ACTN1-219ENST00000556432 COPZ2Q9P299 210 aa9.66□□□□□ -0.86
ACTN1-219ENST00000556432 TRAV26-1A0A087WT03 109 aa9.65□□□□□ -0.86
ACTN1-219ENST00000556432 A0A0J9YY99 117 aa9.65□□□□□ -0.86
ACTN1-219ENST00000556432 TMEM127O75204 238 aa9.65□□□□□ -0.86
ACTN1-219ENST00000556432 IFNA5P01569 189 aa9.65□□□□□ -0.86
ACTN1-219ENST00000556432 SMR3BP02814 79 aaPredicted RBP9.65□□□□□ -0.86
ACTN1-219ENST00000556432 AZU1P20160 251 aa9.65□□□□□ -0.86
ACTN1-219ENST00000556432 RPS19P39019 145 aaKnown RBP9.65□□□□□ -0.86
ACTN1-219ENST00000556432 ERVFC1-1P60608 527 aa9.65□□□□□ -0.86
ACTN1-219ENST00000556432 AMTNQ6UX39 209 aa9.65□□□□□ -0.86
ACTN1-219ENST00000556432 NOXA1Q86UR1 476 aa9.65□□□□□ -0.86
ACTN1-219ENST00000556432 OR11H7Q8NGC8 314 aa9.65□□□□□ -0.86
ACTN1-219ENST00000556432 OR52E5Q8NH55 327 aa9.65□□□□□ -0.86
ACTN1-219ENST00000556432 GPX8Q8TED1 209 aa9.65□□□□□ -0.86
ACTN1-219ENST00000556432 LINC01587Q99440 93 aa9.65□□□□□ -0.86
ACTN1-219ENST00000556432 FAT1Q14517 4588 aa9.65□□□□□ -0.86
ACTN1-219ENST00000556432 TRAV12-2A0A075B6T6 113 aa9.64□□□□□ -0.87
ACTN1-219ENST00000556432 DUSP14O95147 198 aaKnown RBP9.64□□□□□ -0.87
ACTN1-219ENST00000556432 GABARAPO95166 117 aa9.64□□□□□ -0.87
ACTN1-219ENST00000556432 ELK1P19419 428 aa9.64□□□□□ -0.87
ACTN1-219ENST00000556432 GALR1P47211 349 aa9.64□□□□□ -0.87
ACTN1-219ENST00000556432 MEOX2P50222 304 aa9.64□□□□□ -0.87
ACTN1-219ENST00000556432 CNN1P51911 297 aaKnown RBP9.64□□□□□ -0.87
ACTN1-219ENST00000556432 KLF9Q13886 244 aaPredicted RBP9.64□□□□□ -0.87
ACTN1-219ENST00000556432 GPR107Q5VW38 600 aa9.64□□□□□ -0.87
ACTN1-219ENST00000556432 CDPF1Q6NVV7 123 aa9.64□□□□□ -0.87
ACTN1-219ENST00000556432 CROCCP3Q8IVE0 287 aa9.64□□□□□ -0.87
ACTN1-219ENST00000556432 CCDC71LQ8N9Z2 235 aa9.64□□□□□ -0.87
ACTN1-219ENST00000556432 OR10J6PQ8NGY7 276 aa9.64□□□□□ -0.87
ACTN1-219ENST00000556432 TMEM170AQ8WVE7 144 aa9.64□□□□□ -0.87
ACTN1-219ENST00000556432 CACNG5Q9UF02 275 aa9.64□□□□□ -0.87
ACTN1-219ENST00000556432 SMIM31A0A1B0GVY4 71 aa9.63□□□□□ -0.87
ACTN1-219ENST00000556432 PLAC8L1A1L4L8 177 aa9.63□□□□□ -0.87
ACTN1-219ENST00000556432 FAM229AH3BQW9 127 aa9.63□□□□□ -0.87
ACTN1-219ENST00000556432 FABP1P07148 127 aa9.63□□□□□ -0.87
ACTN1-219ENST00000556432 ZNF182P17025 639 aaPredicted RBP9.63□□□□□ -0.87
ACTN1-219ENST00000556432 M6PRP20645 277 aa9.63□□□□□ -0.87
ACTN1-219ENST00000556432 ZNF90Q03938 601 aa9.63□□□□□ -0.87
ACTN1-219ENST00000556432 OR2F1Q13607 317 aa9.63□□□□□ -0.87
ACTN1-219ENST00000556432 CTF1Q16619 201 aa9.63□□□□□ -0.87
ACTN1-219ENST00000556432 RNASE12Q5GAN4 147 aaKnown RBP9.63□□□□□ -0.87
ACTN1-219ENST00000556432 GPR141Q7Z602 305 aa9.63□□□□□ -0.87
ACTN1-219ENST00000556432 FAM219AQ8IW50 185 aa9.63□□□□□ -0.87
ACTN1-219ENST00000556432 RXFP4Q8TDU9 374 aa9.63□□□□□ -0.87
ACTN1-219ENST00000556432 C16orf74Q96GX8 76 aa9.63□□□□□ -0.87
ACTN1-219ENST00000556432 C17orf77Q96MU5 243 aa9.63□□□□□ -0.87
ACTN1-219ENST00000556432 UPK3BQ9BT76 320 aa9.63□□□□□ -0.87
ACTN1-219ENST00000556432 SLC25A22Q9H936 323 aa9.63□□□□□ -0.87
ACTN1-219ENST00000556432 NOP10Q9NPE3 64 aaKnown RBP9.63□□□□□ -0.87
ACTN1-219ENST00000556432 MRPS16Q9Y3D3 137 aaKnown RBP9.63□□□□□ -0.87
ACTN1-219ENST00000556432 TIMM8BQ9Y5J9 83 aaPredicted RBP9.63□□□□□ -0.87
ACTN1-219ENST00000556432 A8MTW9 85 aa9.62□□□□□ -0.87
ACTN1-219ENST00000556432 CRXO43186 299 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-219ENST00000556432 UCP1P25874 307 aa9.62□□□□□ -0.87
ACTN1-219ENST00000556432 ESRGQ1W209 222 aa9.62□□□□□ -0.87
ACTN1-219ENST00000556432 RNASE10Q5GAN6 216 aaKnown RBP9.62□□□□□ -0.87
ACTN1-219ENST00000556432 ARRDC1Q8N5I2 433 aa9.62□□□□□ -0.87
ACTN1-219ENST00000556432 RSG1Q9BU20 258 aa9.62□□□□□ -0.87
ACTN1-219ENST00000556432 SLC25A39Q9BZJ4 359 aaPredicted RBP9.62□□□□□ -0.87
ACTN1-219ENST00000556432 PPP1R14DQ9NXH3 145 aa9.62□□□□□ -0.87
ACTN1-219ENST00000556432 SNRPGP15A8MWD9 76 aa9.61□□□□□ -0.87
ACTN1-219ENST00000556432 BOLA2-SMG1P6H3BVE0 249 aa9.61□□□□□ -0.87
ACTN1-219ENST00000556432 GABARAPH6UMI1 98 aa9.61□□□□□ -0.87
ACTN1-219ENST00000556432 TAS2R60P59551 318 aa9.61□□□□□ -0.87
ACTN1-219ENST00000556432 KRTAP10-1P60331 282 aa9.61□□□□□ -0.87
ACTN1-219ENST00000556432 ICAM4Q14773 271 aa9.61□□□□□ -0.87
ACTN1-219ENST00000556432 AARDQ4LEZ3 155 aa9.61□□□□□ -0.87
ACTN1-219ENST00000556432 NMSQ5H8A3 153 aa9.61□□□□□ -0.87
ACTN1-219ENST00000556432 Q6ZSN1 163 aa9.61□□□□□ -0.87
ACTN1-219ENST00000556432 TMEM144Q7Z5S9 345 aa9.61□□□□□ -0.87
ACTN1-219ENST00000556432 ZFAND1Q8TCF1 268 aa9.61□□□□□ -0.87
ACTN1-219ENST00000556432 SLC35E1Q96K37 410 aa9.61□□□□□ -0.87
ACTN1-219ENST00000556432 ZNF701M0R085 212 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-219ENST00000556432 ADAP1O75689 374 aa9.6□□□□□ -0.87
ACTN1-219ENST00000556432 B3GALNT1O75752 331 aa9.6□□□□□ -0.87
ACTN1-219ENST00000556432 OR5AC1P0C628 307 aa9.6□□□□□ -0.87
ACTN1-219ENST00000556432 RHOBP62745 196 aa9.6□□□□□ -0.87
ACTN1-219ENST00000556432 MEF2DQ14814 521 aa9.6□□□□□ -0.87
ACTN1-219ENST00000556432 IGFL4Q6B9Z1 124 aa9.6□□□□□ -0.87
ACTN1-219ENST00000556432 Q6ZRN7 208 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-219ENST00000556432 CLVS1Q8IUQ0 354 aaPredicted RBP9.6□□□□□ -0.87
ACTN1-219ENST00000556432 TMEM256Q8N2U0 113 aa9.6□□□□□ -0.87
ACTN1-219ENST00000556432 RNF182Q8N6D2 247 aa9.6□□□□□ -0.87
ACTN1-219ENST00000556432 ZNF738Q8NE65 137 aa9.6□□□□□ -0.87
ACTN1-219ENST00000556432 OR13C8Q8NGS7 320 aa9.6□□□□□ -0.87
ACTN1-219ENST00000556432 RBPMSQ93062 196 aaKnown RBP9.6□□□□□ -0.87
ACTN1-219ENST00000556432 ZNF503Q96F45 646 aa9.6□□□□□ -0.87
ACTN1-219ENST00000556432 TMEM222Q9H0R3 208 aa9.6□□□□□ -0.87
ACTN1-219ENST00000556432 SLC25A32Q9H2D1 315 aa9.6□□□□□ -0.87
ACTN1-219ENST00000556432 TEX13DA0A0J9YY54 714 aaPredicted RBP9.59□□□□□ -0.87
ACTN1-219ENST00000556432 HAMPP81172 84 aa9.59□□□□□ -0.87
ACTN1-219ENST00000556432 HIST1H1AQ02539 215 aaPredicted RBP9.59□□□□□ -0.87
ACTN1-219ENST00000556432 FGL1Q08830 312 aa9.59□□□□□ -0.87
ACTN1-219ENST00000556432 GAMTQ14353 236 aa9.59□□□□□ -0.87
ACTN1-219ENST00000556432 SPCS2Q15005 226 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 138.7 ms