RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 OR1N2Q8NGR9 330 aa12.23□□□□□ -0.45
ARHGEF40-207ENST00000556399 M0R3E3 92 aa12.23□□□□□ -0.45
ARHGEF40-207ENST00000556399 ZNF134P52741 427 aa12.23□□□□□ -0.45
ARHGEF40-207ENST00000556399 MTURNQ8N3F0 131 aa12.23□□□□□ -0.45
ARHGEF40-207ENST00000556399 TTC9CQ8N5M4 171 aa12.23□□□□□ -0.45
ARHGEF40-207ENST00000556399 SLC25A39Q9BZJ4 359 aaPredicted RBP12.23□□□□□ -0.45
ARHGEF40-207ENST00000556399 IGHV3-66A0A0C4DH42 116 aa12.23□□□□□ -0.45
ARHGEF40-207ENST00000556399 POLEQ07864 2286 aa12.23□□□□□ -0.45
ARHGEF40-207ENST00000556399 ATP5LO75964 103 aa12.22□□□□□ -0.45
ARHGEF40-207ENST00000556399 KIR3DL3Q8N743 410 aa12.22□□□□□ -0.45
ARHGEF40-207ENST00000556399 LOXL3P58215 753 aa12.22□□□□□ -0.45
ARHGEF40-207ENST00000556399 IFI27L1Q96BM0 104 aa12.22□□□□□ -0.45
ARHGEF40-207ENST00000556399 UBTD1Q9HAC8 227 aa12.22□□□□□ -0.45
ARHGEF40-207ENST00000556399 SMIM27A0A1W2PRY6 76 aa12.22□□□□□ -0.45
ARHGEF40-207ENST00000556399 TDGF1P13385 188 aa12.22□□□□□ -0.45
ARHGEF40-207ENST00000556399 DLX6P56179 175 aa12.22□□□□□ -0.45
ARHGEF40-207ENST00000556399 OR2K2Q8NGT1 345 aa12.22□□□□□ -0.45
ARHGEF40-207ENST00000556399 IGHV3-49A0A0A0MS15 119 aa12.22□□□□□ -0.45
ARHGEF40-207ENST00000556399 TOMM40O96008 361 aa12.22□□□□□ -0.45
ARHGEF40-207ENST00000556399 Q6ZPA2 131 aa12.22□□□□□ -0.45
ARHGEF40-207ENST00000556399 NAA38Q9BRA0 125 aaKnown RBP12.22□□□□□ -0.45
ARHGEF40-207ENST00000556399 MEGF9Q9H1U4 602 aa12.22□□□□□ -0.45
ARHGEF40-207ENST00000556399 PKDREJQ9NTG1 2253 aa12.22□□□□□ -0.45
ARHGEF40-207ENST00000556399 C19orf67A6NJJ6 358 aa12.21□□□□□ -0.45
ARHGEF40-207ENST00000556399 D6R8Y8 96 aa12.21□□□□□ -0.45
ARHGEF40-207ENST00000556399 PSMG4Q5JS54 123 aa12.21□□□□□ -0.45
ARHGEF40-207ENST00000556399 ODF3L1Q8IXM7 274 aa12.21□□□□□ -0.45
ARHGEF40-207ENST00000556399 ARPC1AQ92747 370 aa12.21□□□□□ -0.45
ARHGEF40-207ENST00000556399 SELENOKQ9Y6D0 94 aa12.21□□□□□ -0.45
ARHGEF40-207ENST00000556399 NBR2O15453 112 aa12.21□□□□□ -0.45
ARHGEF40-207ENST00000556399 ASPHD1Q5U4P2 390 aa12.21□□□□□ -0.45
ARHGEF40-207ENST00000556399 LINC01560Q8TB33 94 aa12.21□□□□□ -0.45
ARHGEF40-207ENST00000556399 SLC25A2Q9BXI2 301 aa12.21□□□□□ -0.45
ARHGEF40-207ENST00000556399 IGHG3P01860 377 aa12.21□□□□□ -0.45
ARHGEF40-207ENST00000556399 RIPPLY3P57055 190 aa12.21□□□□□ -0.45
ARHGEF40-207ENST00000556399 TEX29Q8N6K0 151 aa12.21□□□□□ -0.45
ARHGEF40-207ENST00000556399 CD24P25063 80 aa12.21□□□□□ -0.46
ARHGEF40-207ENST00000556399 HSD52Q0P140 79 aa12.21□□□□□ -0.46
ARHGEF40-207ENST00000556399 GUSBP1Q15486 140 aa12.21□□□□□ -0.46
ARHGEF40-207ENST00000556399 SPTBN2O15020 2390 aa12.21□□□□□ -0.46
ARHGEF40-207ENST00000556399 PRR20EP86478 221 aa12.2□□□□□ -0.46
ARHGEF40-207ENST00000556399 PRR20CP86479 221 aa12.2□□□□□ -0.46
ARHGEF40-207ENST00000556399 PRR20DP86480 221 aa12.2□□□□□ -0.46
ARHGEF40-207ENST00000556399 PRR20BP86481 221 aa12.2□□□□□ -0.46
ARHGEF40-207ENST00000556399 PRR20AP86496 221 aa12.2□□□□□ -0.46
ARHGEF40-207ENST00000556399 STPG4Q8N801 248 aa12.2□□□□□ -0.46
ARHGEF40-207ENST00000556399 YLPM1P49750 1951 aaKnown RBP12.2□□□□□ -0.46
ARHGEF40-207ENST00000556399 FABP5P3A8MUU1 101 aa12.2□□□□□ -0.46
ARHGEF40-207ENST00000556399 TMPRSS3P57727 454 aa12.2□□□□□ -0.46
ARHGEF40-207ENST00000556399 C17orf58Q2M2W7 97 aa12.2□□□□□ -0.46
ARHGEF40-207ENST00000556399 NHP2Q9NX24 153 aaKnown RBP12.2□□□□□ -0.46
ARHGEF40-207ENST00000556399 CADP27708 2225 aa12.2□□□□□ -0.46
ARHGEF40-207ENST00000556399 SNCGO76070 127 aa12.2□□□□□ -0.46
ARHGEF40-207ENST00000556399 TDRG1Q3Y452 100 aa12.2□□□□□ -0.46
ARHGEF40-207ENST00000556399 IGHV1-8P0DP01 117 aa12.19□□□□□ -0.46
ARHGEF40-207ENST00000556399 IGLL1P15814 213 aa12.19□□□□□ -0.46
ARHGEF40-207ENST00000556399 FXYD7P58549 80 aa12.19□□□□□ -0.46
ARHGEF40-207ENST00000556399 PCDH15Q96QU1 1955 aa12.19□□□□□ -0.46
ARHGEF40-207ENST00000556399 IGLV2-14P01704 120 aa12.19□□□□□ -0.46
ARHGEF40-207ENST00000556399 DUX4L9Q6RFH8 374 aaPredicted RBP12.19□□□□□ -0.46
ARHGEF40-207ENST00000556399 SPACA3Q8IXA5 215 aa12.19□□□□□ -0.46
ARHGEF40-207ENST00000556399 YPEL4Q96NS1 127 aa12.19□□□□□ -0.46
ARHGEF40-207ENST00000556399 NDUFA4L2Q9NRX3 87 aa12.19□□□□□ -0.46
ARHGEF40-207ENST00000556399 LYNX1G3V0Z9 82 aa12.19□□□□□ -0.46
ARHGEF40-207ENST00000556399 LYNX1P0DP58 116 aa12.19□□□□□ -0.46
ARHGEF40-207ENST00000556399 HTN1P15515 57 aa12.19□□□□□ -0.46
ARHGEF40-207ENST00000556399 LYZL1Q6UWQ5 148 aa12.19□□□□□ -0.46
ARHGEF40-207ENST00000556399 H7C2G1 150 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 M0R381 172 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 MMP23AO75900 390 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 FAM231DQ6ZW35 169 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 Q86TA4 180 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 CACNA1GO43497 2377 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 IGHV2-26A0A0B4J1V2 119 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 NPIPB5A8MRT5 1133 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 TIMM23O14925 209 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 NCR2O95944 276 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 PPIFP30405 207 aaKnown RBP12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 OR9G4Q8NGQ1 327 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 TMEM131Q92545 1883 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 A0A1W2PPI3 338 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 TMEM178BH3BS89 294 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 NDUFA3O95167 84 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 RPRMLQ8N4K4 120 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 OR5A1Q8NGJ0 315 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 TNFRSF14Q92956 283 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 RNASE6Q93091 150 aaKnown RBP12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 EEF1AKMT3Q96AZ1 226 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 EVI2AP22794 236 aa12.18□□□□□ -0.46
ARHGEF40-207ENST00000556399 ARHGAP21Q5T5U3 1957 aa12.17□□□□□ -0.46
ARHGEF40-207ENST00000556399 A0A1B0GV72 72 aa12.17□□□□□ -0.46
ARHGEF40-207ENST00000556399 A0A1B0GWJ7 208 aa12.17□□□□□ -0.46
ARHGEF40-207ENST00000556399 ASCL2Q99929 193 aa12.17□□□□□ -0.46
ARHGEF40-207ENST00000556399 GFRA4Q9GZZ7 299 aa12.17□□□□□ -0.46
ARHGEF40-207ENST00000556399 NXT2Q9NPJ8 142 aaKnown RBP12.17□□□□□ -0.46
ARHGEF40-207ENST00000556399 LSM4Q9Y4Z0 139 aaKnown RBP12.17□□□□□ -0.46
ARHGEF40-207ENST00000556399 MUC22E2RYF6 1773 aaPredicted RBP12.17□□□□□ -0.46
ARHGEF40-207ENST00000556399 CD5LO43866 347 aa12.17□□□□□ -0.46
ARHGEF40-207ENST00000556399 PPBPP02775 128 aa12.17□□□□□ -0.46
ARHGEF40-207ENST00000556399 MAJINQ3KP22 176 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms