RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 TMEM252Q8N6L7 170 aa7.18□□□□□ -1.26
SRP54-210ENST00000556380 OR10P1Q8NGE3 313 aa7.18□□□□□ -1.26
SRP54-210ENST00000556380 GLMPQ8WWB7 406 aa7.18□□□□□ -1.26
SRP54-210ENST00000556380 ASCL2Q99929 193 aa7.18□□□□□ -1.26
SRP54-210ENST00000556380 FAM110AQ9BQ89 295 aa7.18□□□□□ -1.26
SRP54-210ENST00000556380 RNF126Q9BV68 326 aa7.18□□□□□ -1.26
SRP54-210ENST00000556380 NPVFQ9HCQ7 196 aa7.18□□□□□ -1.26
SRP54-210ENST00000556380 LYRM2Q9NU23 88 aaPredicted RBP7.18□□□□□ -1.26
SRP54-210ENST00000556380 TRAV2A0A0B4J234 112 aa7.17□□□□□ -1.26
SRP54-210ENST00000556380 IGSF23A1L1A6 192 aa7.17□□□□□ -1.26
SRP54-210ENST00000556380 OR4C46A6NHA9 309 aa7.17□□□□□ -1.26
SRP54-210ENST00000556380 CST7O76096 145 aa7.17□□□□□ -1.26
SRP54-210ENST00000556380 CFDP00746 253 aaPredicted RBP7.17□□□□□ -1.26
SRP54-210ENST00000556380 CXCL3P19876 107 aa7.17□□□□□ -1.26
SRP54-210ENST00000556380 GATA2P23769 480 aaPredicted RBP7.17□□□□□ -1.26
SRP54-210ENST00000556380 S100A10P60903 97 aa7.17□□□□□ -1.26
SRP54-210ENST00000556380 OXA1LQ15070 435 aa7.17□□□□□ -1.26
SRP54-210ENST00000556380 VWC2Q2TAL6 325 aa7.17□□□□□ -1.26
SRP54-210ENST00000556380 ASB13Q8WXK3 278 aa7.17□□□□□ -1.26
SRP54-210ENST00000556380 MS4A6AQ9H2W1 248 aa7.17□□□□□ -1.26
SRP54-210ENST00000556380 TMEM231Q9H6L2 316 aa7.17□□□□□ -1.26
SRP54-210ENST00000556380 OR5AC2Q9NZP5 309 aa7.17□□□□□ -1.26
SRP54-210ENST00000556380 RABAC1Q9UI14 185 aa7.17□□□□□ -1.26
SRP54-210ENST00000556380 RLN2P04090 185 aa7.16□□□□□ -1.26
SRP54-210ENST00000556380 EIF2B2P49770 351 aaKnown RBP7.16□□□□□ -1.26
SRP54-210ENST00000556380 SULT1A1P50225 295 aa7.16□□□□□ -1.26
SRP54-210ENST00000556380 BCAP31P51572 246 aa7.16□□□□□ -1.26
SRP54-210ENST00000556380 CAV2P51636 162 aa7.16□□□□□ -1.26
SRP54-210ENST00000556380 PLP1P60201 277 aa7.16□□□□□ -1.26
SRP54-210ENST00000556380 AKR1C1Q04828 323 aa7.16□□□□□ -1.26
SRP54-210ENST00000556380 SLC38A11Q08AI6 406 aa7.16□□□□□ -1.26
SRP54-210ENST00000556380 HAGHQ16775 308 aa7.16□□□□□ -1.26
SRP54-210ENST00000556380 CYP2G1PQ6ZSU1 146 aa7.16□□□□□ -1.26
SRP54-210ENST00000556380 GBGT1Q8N5D6 347 aa7.16□□□□□ -1.26
SRP54-210ENST00000556380 DCANP1Q8TF63 244 aa7.16□□□□□ -1.26
SRP54-210ENST00000556380 PPP1R1CQ8WVI7 109 aa7.16□□□□□ -1.26
SRP54-210ENST00000556380 TM2D3Q9BRN9 247 aa7.16□□□□□ -1.26
SRP54-210ENST00000556380 KRTAP4-7Q9BYR0 210 aa7.16□□□□□ -1.26
SRP54-210ENST00000556380 TUBA4BQ9H853 241 aa7.16□□□□□ -1.26
SRP54-210ENST00000556380 MGAT4CQ9UBM8 478 aa7.16□□□□□ -1.26
SRP54-210ENST00000556380 SLC45A2Q9UMX9 530 aa7.16□□□□□ -1.26
SRP54-210ENST00000556380 IGKV3-7A0A075B6H7 116 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 SMCO3A2RU48 225 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 HELTA6NFD8 242 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 E5RGE8 158 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 K7EQG2 157 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 MPC2O95563 127 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 PET100P0DJ07 73 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 S100A7P31151 101 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 S100A11P31949 105 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 NUP62P37198 522 aaPredicted RBP7.15□□□□□ -1.26
SRP54-210ENST00000556380 TFPI2P48307 235 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 LYZP61626 148 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 SELENOTP62341 195 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 FCN2Q15485 313 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 C1orf194Q5T5A4 169 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 TEPPQ6URK8 271 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 FAM24BQ8N5W8 94 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 TMEM217Q8N7C4 229 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 BPIFCQ8NFQ6 507 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 OR11H7Q8NGC8 314 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 GRAMD2BQ96HH9 432 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 NARS2Q96I59 477 aaKnown RBP7.15□□□□□ -1.26
SRP54-210ENST00000556380 C17orf77Q96MU5 243 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 MGST2Q99735 147 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 PBDC1Q9BVG4 233 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 SRD5A3Q9H8P0 318 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 UBQLN2Q9UHD9 624 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 PFDN2Q9UHV9 154 aa7.15□□□□□ -1.26
SRP54-210ENST00000556380 AGPAT2O15120 278 aa7.14□□□□□ -1.27
SRP54-210ENST00000556380 LINC00869P0C866 280 aa7.14□□□□□ -1.27
SRP54-210ENST00000556380 LYL1P12980 280 aa7.14□□□□□ -1.27
SRP54-210ENST00000556380 AP2S1P53680 142 aaPredicted RBP7.14□□□□□ -1.27
SRP54-210ENST00000556380 CMC4P56277 68 aaPredicted RBP7.14□□□□□ -1.27
SRP54-210ENST00000556380 RPL11P62913 178 aaKnown RBP7.14□□□□□ -1.27
SRP54-210ENST00000556380 PAFAH1B2P68402 229 aa7.14□□□□□ -1.27
SRP54-210ENST00000556380 EWSR1Q01844 656 aaKnown RBP eCLIP7.14□□□□□ -1.27
SRP54-210ENST00000556380 NHLH2Q02577 135 aa7.14□□□□□ -1.27
SRP54-210ENST00000556380 ATP6V1FQ16864 119 aa7.14□□□□□ -1.27
SRP54-210ENST00000556380 LRRC37A5PQ49AS3 106 aa7.14□□□□□ -1.27
SRP54-210ENST00000556380 PATE2Q6UY27 113 aa7.14□□□□□ -1.27
SRP54-210ENST00000556380 SIGLEC15Q6ZMC9 328 aa7.14□□□□□ -1.27
SRP54-210ENST00000556380 STX12Q86Y82 276 aa7.14□□□□□ -1.27
SRP54-210ENST00000556380 CHAC2Q8WUX2 184 aa7.14□□□□□ -1.27
SRP54-210ENST00000556380 MAP6D1Q9H9H5 199 aa7.14□□□□□ -1.27
SRP54-210ENST00000556380 WDR83OSQ9Y284 106 aa7.14□□□□□ -1.27
SRP54-210ENST00000556380 ZNF98A6NK75 572 aa7.13□□□□□ -1.27
SRP54-210ENST00000556380 DNASE2O00115 360 aaPredicted RBP7.13□□□□□ -1.27
SRP54-210ENST00000556380 HYPMO75409 117 aa7.13□□□□□ -1.27
SRP54-210ENST00000556380 ORM2P19652 201 aa7.13□□□□□ -1.27
SRP54-210ENST00000556380 HBG1P69891 147 aa7.13□□□□□ -1.27
SRP54-210ENST00000556380 HBG2P69892 147 aa7.13□□□□□ -1.27
SRP54-210ENST00000556380 BAXQ07812 192 aa7.13□□□□□ -1.27
SRP54-210ENST00000556380 S100A7AQ86SG5 101 aa7.13□□□□□ -1.27
SRP54-210ENST00000556380 APRG1Q8IVJ8 170 aa7.13□□□□□ -1.27
SRP54-210ENST00000556380 STXBP6Q8NFX7 210 aa7.13□□□□□ -1.27
SRP54-210ENST00000556380 SHANK2-AS3Q9BTD1 123 aa7.13□□□□□ -1.27
SRP54-210ENST00000556380 TMEM147Q9BVK8 224 aa7.13□□□□□ -1.27
SRP54-210ENST00000556380 SLC25A31Q9H0C2 315 aa7.13□□□□□ -1.27
SRP54-210ENST00000556380 MED28Q9H204 178 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms