RNA–Protein interactions for RNA: ENST00000556342.1

SYNE2-221, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5

Gene SYNE2, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-221ENST00000556342 PAX9P55771 341 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 RRN3P1Q2M238 152 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 SPATA31B1PQ5VZV4 182 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 OR8G2PQ6IF36 304 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 C6orf223Q8N319 242 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 OR13C8Q8NGS7 320 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 COQ8AQ8NI60 647 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 LHFPL5Q8TAF8 219 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 ZFAND1Q8TCF1 268 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 RBPMSQ93062 196 aaKnown RBP7.54□□□□□ -1.2
SYNE2-221ENST00000556342 YIPF6Q96EC8 236 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 RNF125Q96EQ8 232 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 C7orf50Q9BRJ6 194 aaKnown RBP7.54□□□□□ -1.2
SYNE2-221ENST00000556342 PBDC1Q9BVG4 233 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 TMEM222Q9H0R3 208 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 PFDN2Q9UHV9 154 aa7.54□□□□□ -1.2
SYNE2-221ENST00000556342 F6UB75 175 aa7.53□□□□□ -1.2
SYNE2-221ENST00000556342 HPGDSO60760 199 aa7.53□□□□□ -1.2
SYNE2-221ENST00000556342 ATP6V1G2O95670 118 aa7.53□□□□□ -1.2
SYNE2-221ENST00000556342 OR5AC1P0C628 307 aa7.53□□□□□ -1.2
SYNE2-221ENST00000556342 ALDH3B2P48448 385 aa7.53□□□□□ -1.2
SYNE2-221ENST00000556342 SUMO1P63165 101 aaKnown RBP7.53□□□□□ -1.2
SYNE2-221ENST00000556342 NMSQ5H8A3 153 aa7.53□□□□□ -1.2
SYNE2-221ENST00000556342 FAM78BQ5VT40 261 aa7.53□□□□□ -1.2
SYNE2-221ENST00000556342 EBLN2Q6P2I7 272 aa7.53□□□□□ -1.2
SYNE2-221ENST00000556342 GSG1LQ6UXU4 331 aa7.53□□□□□ -1.2
SYNE2-221ENST00000556342 NOXA1Q86UR1 476 aa7.53□□□□□ -1.2
SYNE2-221ENST00000556342 Q8N1X5 172 aa7.53□□□□□ -1.2
SYNE2-221ENST00000556342 OR4D10Q8NGI6 311 aa7.53□□□□□ -1.2
SYNE2-221ENST00000556342 ZNRF2Q8NHG8 242 aa7.53□□□□□ -1.2
SYNE2-221ENST00000556342 TERB2Q8NHR7 220 aa7.53□□□□□ -1.2
SYNE2-221ENST00000556342 MARCH1Q8TCQ1 289 aa7.53□□□□□ -1.2
SYNE2-221ENST00000556342 GLYATL2Q8WU03 294 aa7.53□□□□□ -1.2
SYNE2-221ENST00000556342 GPR146Q96CH1 333 aa7.53□□□□□ -1.2
SYNE2-221ENST00000556342 ABHD1Q96SE0 405 aa7.53□□□□□ -1.2
SYNE2-221ENST00000556342 MAGT1Q9H0U3 335 aa7.53□□□□□ -1.2
SYNE2-221ENST00000556342 A0A0J9YX75 114 aa7.52□□□□□ -1.21
SYNE2-221ENST00000556342 ISLRO14498 428 aa7.52□□□□□ -1.21
SYNE2-221ENST00000556342 SUPT4H1P63272 117 aaKnown RBP7.52□□□□□ -1.21
SYNE2-221ENST00000556342 KLF9Q13886 244 aaPredicted RBP7.52□□□□□ -1.21
SYNE2-221ENST00000556342 SCGB2B2Q4G0G5 96 aa7.52□□□□□ -1.21
SYNE2-221ENST00000556342 C1orf194Q5T5A4 169 aa7.52□□□□□ -1.21
SYNE2-221ENST00000556342 OR52I2Q8NH67 350 aa7.52□□□□□ -1.21
SYNE2-221ENST00000556342 KRTAP4-2Q9BYR5 136 aa7.52□□□□□ -1.21
SYNE2-221ENST00000556342 MTFP1Q9UDX5 166 aa7.52□□□□□ -1.21
SYNE2-221ENST00000556342 TEX13DA0A0J9YY54 714 aaPredicted RBP7.51□□□□□ -1.21
SYNE2-221ENST00000556342 ZFP92A6NM28 416 aa7.51□□□□□ -1.21
SYNE2-221ENST00000556342 A8MTW9 85 aa7.51□□□□□ -1.21
SYNE2-221ENST00000556342 NCS1P62166 190 aa7.51□□□□□ -1.21
SYNE2-221ENST00000556342 ZNF90Q03938 601 aa7.51□□□□□ -1.21
SYNE2-221ENST00000556342 MEF2DQ14814 521 aa7.51□□□□□ -1.21
SYNE2-221ENST00000556342 TMEM268Q5VZI3 342 aa7.51□□□□□ -1.21
SYNE2-221ENST00000556342 SELENOHQ8IZQ5 122 aaKnown RBP7.51□□□□□ -1.21
SYNE2-221ENST00000556342 IGF2BP2-AS1Q96M15 143 aa7.51□□□□□ -1.21
SYNE2-221ENST00000556342 RTBDNQ9BSG5 229 aaPredicted RBP7.51□□□□□ -1.21
SYNE2-221ENST00000556342 TMEM208Q9BTX3 173 aa7.51□□□□□ -1.21
SYNE2-221ENST00000556342 KRTAP4-11Q9BYQ6 195 aa7.51□□□□□ -1.21
SYNE2-221ENST00000556342 NAA60Q9H7X0 242 aa7.51□□□□□ -1.21
SYNE2-221ENST00000556342 SCRT2Q9NQ03 307 aa7.51□□□□□ -1.21
SYNE2-221ENST00000556342 CACFD1Q9UGQ2 172 aa7.51□□□□□ -1.21
SYNE2-221ENST00000556342 C14orf166Q9Y224 244 aaKnown RBP7.51□□□□□ -1.21
SYNE2-221ENST00000556342 U3KQ87 197 aa7.51□□□□□ -1.21
SYNE2-221ENST00000556342 IGKV1D-37A0A075B6S9 117 aa7.5□□□□□ -1.21
SYNE2-221ENST00000556342 LYRM9A8MSI8 78 aa7.5□□□□□ -1.21
SYNE2-221ENST00000556342 FAM25AB3EWG3 89 aa7.5□□□□□ -1.21
SYNE2-221ENST00000556342 FAM25CB3EWG5 89 aa7.5□□□□□ -1.21
SYNE2-221ENST00000556342 FAM25GB3EWG6 89 aa7.5□□□□□ -1.21
SYNE2-221ENST00000556342 TNFAIP8O95379 198 aa7.5□□□□□ -1.21
SYNE2-221ENST00000556342 RAB3DO95716 219 aa7.5□□□□□ -1.21
SYNE2-221ENST00000556342 TAS2R19P59542 299 aa7.5□□□□□ -1.21
SYNE2-221ENST00000556342 KRTAP10-2P60368 255 aa7.5□□□□□ -1.21
SYNE2-221ENST00000556342 LYZP61626 148 aa7.5□□□□□ -1.21
SYNE2-221ENST00000556342 SAMD13Q5VXD3 122 aa7.5□□□□□ -1.21
SYNE2-221ENST00000556342 AMTNQ6UX39 209 aa7.5□□□□□ -1.21
SYNE2-221ENST00000556342 OR8I2Q8N0Y5 310 aa7.5□□□□□ -1.21
SYNE2-221ENST00000556342 TMEM229BQ8NBD8 167 aa7.5□□□□□ -1.21
SYNE2-221ENST00000556342 RPRMQ9NS64 109 aa7.5□□□□□ -1.21
SYNE2-221ENST00000556342 DOK5Q9P104 306 aa7.5□□□□□ -1.21
SYNE2-221ENST00000556342 CRYM-AS1A6NIL9 109 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 ZNF705GA8MUZ8 300 aaPredicted RBP7.49□□□□□ -1.21
SYNE2-221ENST00000556342 SNRPGP15A8MWD9 76 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 F5H768 121 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 NUDT3O95989 172 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 PRM2P04554 102 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 SULT1A3P0DMM9 295 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 SULT1A4P0DMN0 295 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 DEFB130BP0DP73 79 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 DEFB130AP0DP74 79 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 MEOX2P50222 304 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 CCL18P55774 89 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 VBP1P61758 197 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 GAMTQ14353 236 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 GPR107Q5VW38 600 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 STEAP1BQ6NZ63 245 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 SPATA12Q7Z6I5 190 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 LGI3Q8N145 548 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 PPP1R14BQ96C90 147 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 SLC35E1Q96K37 410 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 VCX3AQ9NNX9 186 aa7.49□□□□□ -1.21
SYNE2-221ENST00000556342 EXTL2Q9UBQ6 330 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms