RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 GGCTO75223 188 aaKnown RBP3.1□□□□□ -1.91
ATXN3-240ENST00000556339 OR2H2O95918 312 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 HAND1O96004 215 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 MT-CO2P00403 227 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 HPRT1P00492 218 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 HRASP01112 189 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 IGKV1-39P01597 117 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 IGKV1-5P01602 117 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 TRGC2P03986 189 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 IGKV1D-39P04432 117 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 CXCL1P09341 107 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 TRGC1P0CF51 173 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 GZMHP20718 246 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 HTR1DP28221 377 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 AKR1C3P42330 323 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 PRRX1P54821 245 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 MEF2CQ06413 473 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-240ENST00000556339 EIF4EBP1Q13541 118 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-240ENST00000556339 RTL8BQ17RB0 113 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 PYY3Q5JQD4 70 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 OR2B11Q5JQS5 317 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 FAM209BQ5JX69 171 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 HCP5Q6MZN7 132 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 NDUFA11Q86Y39 141 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 ABHD12Q8N2K0 398 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 DRAM1Q8N682 238 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-240ENST00000556339 OR51G1Q8NGK1 321 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 OR10G9Q8NGN4 311 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 OR10G7Q8NGN6 311 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 OR10D4PQ8NGN7 298 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 OR2T10Q8NGZ9 312 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 TMEM170AQ8WVE7 144 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 TMEM18Q96B42 140 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 ZNF714Q96N38 554 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 CITED2Q99967 270 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-240ENST00000556339 SMIM7Q9BQ49 75 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 FGF23Q9GZV9 251 aaPredicted RBP3.1□□□□□ -1.91
ATXN3-240ENST00000556339 ZNF581Q9P0T4 197 aa3.1□□□□□ -1.91
ATXN3-240ENST00000556339 TBL2Q9Y4P3 447 aaKnown RBP3.1□□□□□ -1.91
ATXN3-240ENST00000556339 SAA2-SAA4A0A096LPE2 208 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 TGIF2-C20orf24A0A0A6YYL0 155 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 TRBV9A0A0B4J1U6 114 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 A0A0G2JRQ6 117 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 A6NDX4 124 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 ZFP92A6NM28 416 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 PMS2P5A8MQ11 134 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 BMPR1BO00238 502 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 SIRPB1O00241 398 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 SPINT2O43291 252 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 YIF1AO95070 293 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 FAM106CPP0CH98 169 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 IGHV1-8P0DP01 117 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 AREGP15514 252 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 IGLL1P15814 213 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 CD24P25063 80 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 CD1BP29016 333 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 CEACAM3P40198 252 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 OPRK1P41145 380 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 GALR1P47211 349 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 RAB7AP51149 207 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 SPCS3P61009 180 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 RPL23P62829 140 aaKnown RBP3.09□□□□□ -1.91
ATXN3-240ENST00000556339 BLCAPP62952 87 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 PAFAH1B2P68402 229 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 RUNX1Q01196 453 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 RAB31Q13636 194 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 HES1Q14469 280 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 ZNF726P1Q15940 193 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 IQCJQ1A5X6 159 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 SPANXN5Q5MJ07 72 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 MINOS1Q5TGZ0 78 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 LCN15Q6UWW0 184 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 H2BFWTQ7Z2G1 175 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 DYNAPQ8N1N2 210 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 RPP25LQ8N5L8 163 aaKnown RBP3.09□□□□□ -1.91
ATXN3-240ENST00000556339 TPRX1Q8N7U7 411 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 ZNF383Q8NA42 475 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 OR1P1Q8NH06 330 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 ZNF596Q8TC21 504 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 PIFOQ8TCI5 191 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 DTD1Q8TEA8 209 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 FRZBQ92765 325 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 RPUSD4Q96CM3 377 aaKnown RBP3.09□□□□□ -1.91
ATXN3-240ENST00000556339 ADTRPQ96IZ2 230 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 HIST1H2BLQ99880 126 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 C2orf88Q9BSF0 95 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 RSG1Q9BU20 258 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 CLEC7AQ9BXN2 247 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 NPCDR1Q9BY65 106 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 TMEM133Q9H2Q1 129 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 GAL3ST2Q9H3Q3 398 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 RBKSQ9H477 322 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 ZNF702PQ9H963 129 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 OR6C3Q9NZP0 311 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 DPM3Q9P2X0 92 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 JPT1Q9UK76 154 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 TCF19Q9Y242 345 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 WDR83OSQ9Y284 106 aa3.09□□□□□ -1.91
ATXN3-240ENST00000556339 TSSC4Q9Y5U2 329 aaPredicted RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms