RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 TP53TG1Q9Y2A0 90 aa8.52□□□□□ -1.05
SLIRP-205ENST00000556310 CSMD3Q7Z407 3707 aa8.52□□□□□ -1.05
SLIRP-205ENST00000556310 C5orf51A6NDU8 294 aa8.51□□□□□ -1.05
SLIRP-205ENST00000556310 FNDC10F2Z333 226 aa8.51□□□□□ -1.05
SLIRP-205ENST00000556310 METTL15P1P0C7V9 234 aa8.51□□□□□ -1.05
SLIRP-205ENST00000556310 RPL35AP18077 110 aaKnown RBP8.51□□□□□ -1.05
SLIRP-205ENST00000556310 DEFB131AP59861 70 aa8.51□□□□□ -1.05
SLIRP-205ENST00000556310 DLK1P80370 383 aa8.51□□□□□ -1.05
SLIRP-205ENST00000556310 OR2F1Q13607 317 aa8.51□□□□□ -1.05
SLIRP-205ENST00000556310 SIGLEC15Q6ZMC9 328 aa8.51□□□□□ -1.05
SLIRP-205ENST00000556310 TMEM144Q7Z5S9 345 aa8.51□□□□□ -1.05
SLIRP-205ENST00000556310 STPG3Q8N7X2 389 aa8.51□□□□□ -1.05
SLIRP-205ENST00000556310 BPIFCQ8NFQ6 507 aa8.51□□□□□ -1.05
SLIRP-205ENST00000556310 OVOL2Q9BRP0 275 aa8.51□□□□□ -1.05
SLIRP-205ENST00000556310 NRN1Q9NPD7 142 aa8.51□□□□□ -1.05
SLIRP-205ENST00000556310 STARD9Q9P2P6 4700 aa8.51□□□□□ -1.05
SLIRP-205ENST00000556310 SMCO3A2RU48 225 aa8.5□□□□□ -1.05
SLIRP-205ENST00000556310 C7orf66A4D0T2 115 aa8.5□□□□□ -1.05
SLIRP-205ENST00000556310 H3BS24 57 aa8.5□□□□□ -1.05
SLIRP-205ENST00000556310 K7EPK0 472 aa8.5□□□□□ -1.05
SLIRP-205ENST00000556310 CCNKO75909 580 aa8.5□□□□□ -1.05
SLIRP-205ENST00000556310 ZNF688P0C7X2 276 aa8.5□□□□□ -1.05
SLIRP-205ENST00000556310 DEFA1P59665 94 aa8.5□□□□□ -1.05
SLIRP-205ENST00000556310 DEFA3P59666 94 aa8.5□□□□□ -1.05
SLIRP-205ENST00000556310 DEFB135Q30KP9 77 aa8.5□□□□□ -1.05
SLIRP-205ENST00000556310 C1orf194Q5T5A4 169 aa8.5□□□□□ -1.05
SLIRP-205ENST00000556310 LEMD1Q68G75 181 aa8.5□□□□□ -1.05
SLIRP-205ENST00000556310 GSG1LQ6UXU4 331 aa8.5□□□□□ -1.05
SLIRP-205ENST00000556310 NRARPQ7Z6K4 114 aa8.5□□□□□ -1.05
SLIRP-205ENST00000556310 OR10P1Q8NGE3 313 aa8.5□□□□□ -1.05
SLIRP-205ENST00000556310 C2orf50Q96LR7 162 aa8.5□□□□□ -1.05
SLIRP-205ENST00000556310 GPN1Q9HCN4 374 aaPredicted RBP8.5□□□□□ -1.05
SLIRP-205ENST00000556310 FBXL17Q9UF56 701 aa8.5□□□□□ -1.05
SLIRP-205ENST00000556310 SLC45A2Q9UMX9 530 aa8.5□□□□□ -1.05
SLIRP-205ENST00000556310 DYNC2H1Q8NCM8 4307 aaKnown RBP8.49□□□□□ -1.05
SLIRP-205ENST00000556310 AGRNO00468 2067 aa8.49□□□□□ -1.05
SLIRP-205ENST00000556310 L7N2F9 121 aa8.49□□□□□ -1.05
SLIRP-205ENST00000556310 PRAF2O60831 178 aa8.49□□□□□ -1.05
SLIRP-205ENST00000556310 LYL1P12980 280 aa8.49□□□□□ -1.05
SLIRP-205ENST00000556310 RRAS2P62070 204 aaPredicted RBP8.49□□□□□ -1.05
SLIRP-205ENST00000556310 VAMP2P63027 116 aa8.49□□□□□ -1.05
SLIRP-205ENST00000556310 PPP1R14BQ96C90 147 aa8.49□□□□□ -1.05
SLIRP-205ENST00000556310 CSTL1Q9H114 145 aa8.49□□□□□ -1.05
SLIRP-205ENST00000556310 C11orf1Q9H5F2 150 aa8.49□□□□□ -1.05
SLIRP-205ENST00000556310 SEPSECSQ9HD40 501 aaKnown RBP8.49□□□□□ -1.05
SLIRP-205ENST00000556310 MGAT4CQ9UBM8 478 aa8.49□□□□□ -1.05
SLIRP-205ENST00000556310 LSM5Q9Y4Y9 91 aaKnown RBP8.49□□□□□ -1.05
SLIRP-205ENST00000556310 INMT-MINDY4F8WBC2 141 aa8.48□□□□□ -1.05
SLIRP-205ENST00000556310 SPRY2O43597 315 aa8.48□□□□□ -1.05
SLIRP-205ENST00000556310 PVALBP20472 110 aaPredicted RBP8.48□□□□□ -1.05
SLIRP-205ENST00000556310 GATA2P23769 480 aaPredicted RBP8.48□□□□□ -1.05
SLIRP-205ENST00000556310 S100A10P60903 97 aa8.48□□□□□ -1.05
SLIRP-205ENST00000556310 SNRPD3P62318 126 aaKnown RBP8.48□□□□□ -1.05
SLIRP-205ENST00000556310 SELENOTP62341 195 aa8.48□□□□□ -1.05
SLIRP-205ENST00000556310 IL15RAQ13261 267 aa8.48□□□□□ -1.05
SLIRP-205ENST00000556310 PSMG4Q5JS54 123 aa8.48□□□□□ -1.05
SLIRP-205ENST00000556310 CASC10Q5T4H9 136 aa8.48□□□□□ -1.05
SLIRP-205ENST00000556310 CYP2G1PQ6ZSU1 146 aa8.48□□□□□ -1.05
SLIRP-205ENST00000556310 STHQ8IWL8 128 aa8.48□□□□□ -1.05
SLIRP-205ENST00000556310 RNF183Q96D59 192 aa8.48□□□□□ -1.05
SLIRP-205ENST00000556310 MARVELD1Q9BSK0 173 aa8.48□□□□□ -1.05
SLIRP-205ENST00000556310 GGACTQ9BVM4 153 aa8.48□□□□□ -1.05
SLIRP-205ENST00000556310 NPVFQ9HCQ7 196 aa8.48□□□□□ -1.05
SLIRP-205ENST00000556310 TENM2Q9NT68 2774 aa8.47□□□□□ -1.05
SLIRP-205ENST00000556310 DEDDO75618 318 aa8.47□□□□□ -1.05
SLIRP-205ENST00000556310 ORM2P19652 201 aa8.47□□□□□ -1.05
SLIRP-205ENST00000556310 S100A7P31151 101 aa8.47□□□□□ -1.05
SLIRP-205ENST00000556310 CAV2P51636 162 aa8.47□□□□□ -1.05
SLIRP-205ENST00000556310 ARL16Q0P5N6 197 aa8.47□□□□□ -1.05
SLIRP-205ENST00000556310 TEPPQ6URK8 271 aa8.47□□□□□ -1.05
SLIRP-205ENST00000556310 TMEM182Q6ZP80 229 aaPredicted RBP8.47□□□□□ -1.05
SLIRP-205ENST00000556310 TRPT1Q86TN4 253 aaKnown RBP8.47□□□□□ -1.05
SLIRP-205ENST00000556310 OR8I2Q8N0Y5 310 aa8.47□□□□□ -1.05
SLIRP-205ENST00000556310 TMEM147Q9BVK8 224 aa8.47□□□□□ -1.05
SLIRP-205ENST00000556310 ZNF98A6NK75 572 aa8.46□□□□□ -1.06
SLIRP-205ENST00000556310 KNCNA6PVL3 124 aa8.46□□□□□ -1.06
SLIRP-205ENST00000556310 GOSR2O14653 212 aa8.46□□□□□ -1.06
SLIRP-205ENST00000556310 CA1P00915 261 aaPredicted RBP8.46□□□□□ -1.06
SLIRP-205ENST00000556310 LINC00869P0C866 280 aa8.46□□□□□ -1.06
SLIRP-205ENST00000556310 BCAP31P51572 246 aa8.46□□□□□ -1.06
SLIRP-205ENST00000556310 PLP1P60201 277 aa8.46□□□□□ -1.06
SLIRP-205ENST00000556310 SLC38A11Q08AI6 406 aa8.46□□□□□ -1.06
SLIRP-205ENST00000556310 RAB32Q13637 225 aa8.46□□□□□ -1.06
SLIRP-205ENST00000556310 SAMD13Q5VXD3 122 aa8.46□□□□□ -1.06
SLIRP-205ENST00000556310 ZNF546Q86UE3 836 aa8.46□□□□□ -1.06
SLIRP-205ENST00000556310 OR1B1Q8NGR6 318 aa8.46□□□□□ -1.06
SLIRP-205ENST00000556310 IL17DQ8TAD2 202 aa8.46□□□□□ -1.06
SLIRP-205ENST00000556310 GATAD1Q8WUU5 269 aa8.46□□□□□ -1.06
SLIRP-205ENST00000556310 SLC25A32Q9H2D1 315 aa8.46□□□□□ -1.06
SLIRP-205ENST00000556310 LYRM2Q9NU23 88 aaPredicted RBP8.46□□□□□ -1.06
SLIRP-205ENST00000556310 H3BRN7 92 aa8.45□□□□□ -1.06
SLIRP-205ENST00000556310 SOCS3O14543 225 aa8.45□□□□□ -1.06
SLIRP-205ENST00000556310 SPP1P10451 314 aa8.45□□□□□ -1.06
SLIRP-205ENST00000556310 GALR1P47211 349 aa8.45□□□□□ -1.06
SLIRP-205ENST00000556310 PSMB3P49720 205 aa8.45□□□□□ -1.06
SLIRP-205ENST00000556310 MEOX2P50222 304 aa8.45□□□□□ -1.06
SLIRP-205ENST00000556310 RAP2BP61225 183 aa8.45□□□□□ -1.06
SLIRP-205ENST00000556310 TMEM41BQ5BJD5 291 aa8.45□□□□□ -1.06
SLIRP-205ENST00000556310 ACTL10Q5JWF8 245 aa8.45□□□□□ -1.06
SLIRP-205ENST00000556310 ZFAND6Q6FIF0 208 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms