RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 OR1L8Q8NGR8 309 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 LSM10Q969L4 123 aaKnown RBP4.21□□□□□ -1.74
PRKCH-220ENST00000556164 MGLLQ99685 303 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 RNF126Q9BV68 326 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 MS4A6AQ9H2W1 248 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 SAV1Q9H4B6 383 aaPredicted RBP4.21□□□□□ -1.74
PRKCH-220ENST00000556164 TPRKBQ9Y3C4 175 aa4.21□□□□□ -1.74
PRKCH-220ENST00000556164 NACAE9PAV3 2078 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 IGLV2-18A0A075B6J9 118 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 DEFB131BA0A096LNP1 70 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 IGHV3-66A0A0C4DH42 116 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 SNAPC5O75971 98 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 IGHV3-48P01763 117 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 AMBPP02760 352 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 CD5P06127 495 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 C4BPBP20851 252 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 RAB4BP61018 213 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 FOXI1Q12951 378 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 RIGQ13278 110 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 MRPL23Q16540 153 aaKnown RBP4.2□□□□□ -1.74
PRKCH-220ENST00000556164 OGFRL1Q5TC84 451 aaPredicted RBP4.2□□□□□ -1.74
PRKCH-220ENST00000556164 C22orf42Q6IC83 251 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 ZNF773Q6PK81 442 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 ATRAIDQ6UW56 229 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 ZNF818PQ6ZRF7 136 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 ZNF767PQ75MW2 155 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 FAM24BQ8N5W8 94 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 C15orf54Q8N8G6 183 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 BEST4Q8NFU0 473 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 SLC25A46Q96AG3 418 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 DGCR14Q96DF8 476 aaKnown RBP4.2□□□□□ -1.74
PRKCH-220ENST00000556164 ZNF414Q96IQ9 312 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 OR10C1Q96KK4 312 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 GINS3Q9BRX5 216 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 VCXQ9H320 206 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 FNDC4Q9H6D8 234 aaPredicted RBP4.2□□□□□ -1.74
PRKCH-220ENST00000556164 NDUFA4L2Q9NRX3 87 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 COMMD9Q9P000 198 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 RABAC1Q9UI14 185 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 CELA1Q9UNI1 258 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 OR51B2Q9Y5P1 312 aa4.2□□□□□ -1.74
PRKCH-220ENST00000556164 FAM74A7A6NL05 159 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 ZNF705EA8MWA4 302 aaPredicted RBP4.19□□□□□ -1.74
PRKCH-220ENST00000556164 GNG7O60262 68 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 KRASP01116 189 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 IFNA10P01566 189 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 GIG44P09565 113 aaPredicted RBP4.19□□□□□ -1.74
PRKCH-220ENST00000556164 G6PCP35575 357 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 AMTP48728 403 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 C12orf74Q32Q52 190 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 LGALS9BQ3B8N2 356 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 FAM74A3Q4VXF1 159 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 MORN3Q6PF18 240 aaPredicted RBP4.19□□□□□ -1.74
PRKCH-220ENST00000556164 PRSS48Q7RTY5 328 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 TRPT1Q86TN4 253 aaKnown RBP4.19□□□□□ -1.74
PRKCH-220ENST00000556164 UBE2DNLQ8IWF7 75 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 PRR26Q8N8Z3 221 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 DUSP18Q8NEJ0 188 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 OR1P1Q8NH06 330 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 LGALS14Q8TCE9 139 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 TMEM56Q96MV1 263 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 MLST8Q9BVC4 326 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 NXF2Q9GZY0 626 aaKnown RBP4.19□□□□□ -1.74
PRKCH-220ENST00000556164 DUSP21Q9H596 190 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 CLEC5AQ9NY25 188 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 TNFRSF18Q9Y5U5 241 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 FAT2Q9NYQ8 4349 aa4.19□□□□□ -1.74
PRKCH-220ENST00000556164 DNAH2Q9P225 4427 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 A0A087WZ39 114 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 TRAV2A0A0B4J234 112 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 TRDV1A0A1B0GX56 115 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 KNCNA6PVL3 124 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 I3L2K1 104 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 NDUFS6O75380 124 aaKnown RBP4.18□□□□□ -1.74
PRKCH-220ENST00000556164 CDK2AP2O75956 126 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 MT-CO2P00403 227 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 IFNA21P01568 189 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 IFNA17P01571 189 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 ZNF688P0C7X2 276 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 LPAR6P43657 344 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 CEBPGP53567 150 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 ICAM4Q14773 271 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 SOHLH1Q5JUK2 328 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 ACTL10Q5JWF8 245 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 UBE2UQ5VVX9 321 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 TOMM20LQ6UXN7 152 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 HOGA1Q86XE5 327 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 SELENOHQ8IZQ5 122 aaKnown RBP4.18□□□□□ -1.74
PRKCH-220ENST00000556164 INO80EQ8NBZ0 244 aaPredicted RBP4.18□□□□□ -1.74
PRKCH-220ENST00000556164 NEXN-AS1Q8NBZ9 246 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 C17orf77Q96MU5 243 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 SCRT1Q9BWW7 348 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 VSIRQ9H7M9 311 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 TMEM14BQ9NUH8 114 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 NDUFB11Q9NX14 153 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 RHBDL2Q9NX52 303 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 FKBP11Q9NYL4 201 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 PRNDQ9UKY0 176 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 DNAH17Q9UFH2 4485 aa4.18□□□□□ -1.74
PRKCH-220ENST00000556164 ABCA13Q86UQ4 5058 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms