RNA–Protein interactions for RNA: ENST00000556009.5

NPC2-208, Transcript of NPC intracellular cholesterol transporter 2, humanhuman

TSL 5

Gene NPC2, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC2-208ENST00000556009 PITX3O75364 302 aa12.8□□□□□ -0.36
NPC2-208ENST00000556009 NXPH3O95157 252 aa12.8□□□□□ -0.36
NPC2-208ENST00000556009 RND2P52198 227 aa12.8□□□□□ -0.36
NPC2-208ENST00000556009 IAH1Q2TAA2 248 aaPredicted RBP12.8□□□□□ -0.36
NPC2-208ENST00000556009 ETFRF1Q6IPR1 90 aa12.8□□□□□ -0.36
NPC2-208ENST00000556009 NOXA1Q86UR1 476 aa12.8□□□□□ -0.36
NPC2-208ENST00000556009 SLC24A4Q8NFF2 622 aa12.8□□□□□ -0.36
NPC2-208ENST00000556009 ELOA3CA0A087WX78 387 aaPredicted RBP12.79□□□□□ -0.36
NPC2-208ENST00000556009 C5orf51A6NDU8 294 aa12.79□□□□□ -0.36
NPC2-208ENST00000556009 GOSR2O14653 212 aa12.79□□□□□ -0.36
NPC2-208ENST00000556009 Q6ZTC4 211 aa12.79□□□□□ -0.36
NPC2-208ENST00000556009 TMEM170AQ8WVE7 144 aa12.79□□□□□ -0.36
NPC2-208ENST00000556009 DNAH2Q9P225 4427 aa12.78□□□□□ -0.36
NPC2-208ENST00000556009 BUB3O43684 328 aa12.78□□□□□ -0.36
NPC2-208ENST00000556009 NUTF2P61970 127 aaKnown RBP12.78□□□□□ -0.36
NPC2-208ENST00000556009 SNRPD3P62318 126 aaKnown RBP12.78□□□□□ -0.36
NPC2-208ENST00000556009 USF2Q15853 346 aaPredicted RBP12.78□□□□□ -0.36
NPC2-208ENST00000556009 PSMG4Q5JS54 123 aa12.78□□□□□ -0.36
NPC2-208ENST00000556009 GSG1LQ6UXU4 331 aa12.78□□□□□ -0.36
NPC2-208ENST00000556009 ZBTB8BQ8NAP8 495 aaPredicted RBP12.78□□□□□ -0.36
NPC2-208ENST00000556009 RNF126Q9BV68 326 aa12.78□□□□□ -0.36
NPC2-208ENST00000556009 C1QTNF4Q9BXJ3 329 aa12.78□□□□□ -0.36
NPC2-208ENST00000556009 CLEC5AQ9NY25 188 aa12.78□□□□□ -0.36
NPC2-208ENST00000556009 GSKIPQ9P0R6 139 aa12.78□□□□□ -0.36
NPC2-208ENST00000556009 HSPB7Q9UBY9 170 aa12.78□□□□□ -0.36
NPC2-208ENST00000556009 FAT2Q9NYQ8 4349 aa12.77□□□□□ -0.37
NPC2-208ENST00000556009 IGHV4-4A0A075B6R2 117 aa12.77□□□□□ -0.37
NPC2-208ENST00000556009 CEBPZOSA8MTT3 80 aa12.77□□□□□ -0.37
NPC2-208ENST00000556009 FAM90A26D6RGX4 464 aa12.77□□□□□ -0.37
NPC2-208ENST00000556009 SIX6O95475 246 aa12.77□□□□□ -0.37
NPC2-208ENST00000556009 TOMM40O96008 361 aa12.77□□□□□ -0.37
NPC2-208ENST00000556009 RD3LP0DJH9 198 aa12.77□□□□□ -0.37
NPC2-208ENST00000556009 OR4D5Q8NGN0 318 aa12.77□□□□□ -0.37
NPC2-208ENST00000556009 NPIPB3Q92617 1050 aa12.77□□□□□ -0.37
NPC2-208ENST00000556009 NRN1Q9NPD7 142 aa12.77□□□□□ -0.37
NPC2-208ENST00000556009 MGAT4CQ9UBM8 478 aa12.77□□□□□ -0.37
NPC2-208ENST00000556009 H3BMM0 161 aa12.76□□□□□ -0.37
NPC2-208ENST00000556009 IL4P05112 153 aa12.76□□□□□ -0.37
NPC2-208ENST00000556009 NPY1RP25929 384 aa12.76□□□□□ -0.37
NPC2-208ENST00000556009 C2orf50Q96LR7 162 aa12.76□□□□□ -0.37
NPC2-208ENST00000556009 MED28Q9H204 178 aa12.76□□□□□ -0.37
NPC2-208ENST00000556009 RBKSQ9H477 322 aa12.76□□□□□ -0.37
NPC2-208ENST00000556009 U3KQ87 197 aa12.76□□□□□ -0.37
NPC2-208ENST00000556009 ID3Q02535 119 aa12.75□□□□□ -0.37
NPC2-208ENST00000556009 C12orf74Q32Q52 190 aa12.75□□□□□ -0.37
NPC2-208ENST00000556009 MAGT1Q9H0U3 335 aa12.75□□□□□ -0.37
NPC2-208ENST00000556009 MED6O75586 246 aa12.74□□□□□ -0.37
NPC2-208ENST00000556009 SCGB1D2O95969 90 aa12.74□□□□□ -0.37
NPC2-208ENST00000556009 NKX2-1P43699 371 aaPredicted RBP12.74□□□□□ -0.37
NPC2-208ENST00000556009 ATP5IP56385 69 aaPredicted RBP12.74□□□□□ -0.37
NPC2-208ENST00000556009 H2BFSP57053 126 aa12.74□□□□□ -0.37
NPC2-208ENST00000556009 FCN2Q15485 313 aa12.74□□□□□ -0.37
NPC2-208ENST00000556009 SIGLEC15Q6ZMC9 328 aa12.74□□□□□ -0.37
NPC2-208ENST00000556009 Q6ZNX1 250 aa12.74□□□□□ -0.37
NPC2-208ENST00000556009 DTD1Q8TEA8 209 aa12.74□□□□□ -0.37
NPC2-208ENST00000556009 NEU1Q99519 415 aa12.74□□□□□ -0.37
NPC2-208ENST00000556009 CELA1Q9UNI1 258 aa12.74□□□□□ -0.37
NPC2-208ENST00000556009 PCLOQ9Y6V0 5065 aa12.74□□□□□ -0.37
NPC2-208ENST00000556009 DEFB131BA0A096LNP1 70 aa12.73□□□□□ -0.37
NPC2-208ENST00000556009 MBPP02686 304 aaPredicted RBP12.73□□□□□ -0.37
NPC2-208ENST00000556009 AMBPP02760 352 aa12.73□□□□□ -0.37
NPC2-208ENST00000556009 PSG1P11464 419 aa12.73□□□□□ -0.37
NPC2-208ENST00000556009 NUP62P37198 522 aaPredicted RBP12.73□□□□□ -0.37
NPC2-208ENST00000556009 RRAS2P62070 204 aaPredicted RBP12.73□□□□□ -0.37
NPC2-208ENST00000556009 POLR2GP62487 172 aaKnown RBP eCLIP12.73□□□□□ -0.37
NPC2-208ENST00000556009 LINC00336Q6ZUF6 198 aa12.73□□□□□ -0.37
NPC2-208ENST00000556009 OR11H7Q8NGC8 314 aa12.73□□□□□ -0.37
NPC2-208ENST00000556009 OR51G1Q8NGK1 321 aa12.73□□□□□ -0.37
NPC2-208ENST00000556009 ACY3Q96HD9 319 aa12.73□□□□□ -0.37
NPC2-208ENST00000556009 XCL2Q9UBD3 114 aa12.73□□□□□ -0.37
NPC2-208ENST00000556009 PFDN2Q9UHV9 154 aa12.73□□□□□ -0.37
NPC2-208ENST00000556009 SYNGR2O43760 224 aa12.72□□□□□ -0.37
NPC2-208ENST00000556009 IFNA10P01566 189 aa12.72□□□□□ -0.37
NPC2-208ENST00000556009 IAPPP10997 89 aa12.72□□□□□ -0.37
NPC2-208ENST00000556009 HLA-DRB4P13762 266 aa12.72□□□□□ -0.37
NPC2-208ENST00000556009 CXCL3P19876 107 aa12.72□□□□□ -0.37
NPC2-208ENST00000556009 IL15RAQ13261 267 aa12.72□□□□□ -0.37
NPC2-208ENST00000556009 OR8G2PQ6IF36 304 aa12.72□□□□□ -0.37
NPC2-208ENST00000556009 ZNF705AQ6ZN79 300 aaPredicted RBP12.72□□□□□ -0.37
NPC2-208ENST00000556009 CLUHP3Q96NS8 147 aa12.72□□□□□ -0.37
NPC2-208ENST00000556009 HLA-DRB4X5D2U9 266 aa12.72□□□□□ -0.37
NPC2-208ENST00000556009 SMIM9A6NGZ8 99 aa12.71□□□□□ -0.37
NPC2-208ENST00000556009 WRBO00258 174 aa12.71□□□□□ -0.37
NPC2-208ENST00000556009 GPX4P36969 197 aaPredicted RBP12.71□□□□□ -0.37
NPC2-208ENST00000556009 CYCSP99999 105 aaKnown RBP12.71□□□□□ -0.37
NPC2-208ENST00000556009 RNF125Q96EQ8 232 aa12.71□□□□□ -0.37
NPC2-208ENST00000556009 NMES1Q9C002 83 aa12.71□□□□□ -0.37
NPC2-208ENST00000556009 TMEM189A5PLL7 270 aa12.7□□□□□ -0.38
NPC2-208ENST00000556009 ZNF705FA8MVS1 300 aaPredicted RBP12.7□□□□□ -0.38
NPC2-208ENST00000556009 K7EPK0 472 aa12.7□□□□□ -0.38
NPC2-208ENST00000556009 SSSCA1O60232 199 aa12.7□□□□□ -0.38
NPC2-208ENST00000556009 ZNF705DP0CH99 300 aaPredicted RBP12.7□□□□□ -0.38
NPC2-208ENST00000556009 ZNF705BP0CI00 300 aaPredicted RBP12.7□□□□□ -0.38
NPC2-208ENST00000556009 P0DMU3 169 aa12.7□□□□□ -0.38
NPC2-208ENST00000556009 FAM231AP0DMU4 169 aa12.7□□□□□ -0.38
NPC2-208ENST00000556009 FAM231CP0DMU5 169 aa12.7□□□□□ -0.38
NPC2-208ENST00000556009 S100A10P60903 97 aa12.7□□□□□ -0.38
NPC2-208ENST00000556009 C1orf194Q5T5A4 169 aa12.7□□□□□ -0.38
NPC2-208ENST00000556009 POM121L12Q8N7R1 296 aa12.7□□□□□ -0.38
NPC2-208ENST00000556009 CIB3Q96Q77 187 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms