RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 SPENQ96T58 3664 aaKnown RBP5.6□□□□□ -1.51
TDP1-213ENST00000555880 IGHV1-3A0A0C4DH29 117 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 E7EQL1 145 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 M0R2Z0 102 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 OR2J3O76001 311 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 RBP4P02753 201 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 C3orf79P0CE67 100 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 APELAP0DMC3 54 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 GP9P14770 177 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 LYZP61626 148 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 PAX2Q02962 417 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 PMCHL1Q16048 86 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 RNASEKQ6P5S7 137 aaKnown RBP5.6□□□□□ -1.51
TDP1-213ENST00000555880 PPP1R27Q86WC6 154 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 FAM19A2Q8N3H0 131 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 Q9H3A6 140 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 ZNF492Q9P255 531 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 UQCR10Q9UDW1 63 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 RNF24Q9Y225 148 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 ZNF835Q9Y2P0 537 aa5.6□□□□□ -1.51
TDP1-213ENST00000555880 POLEQ07864 2286 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 TPRP12270 2363 aaKnown RBP5.59□□□□□ -1.51
TDP1-213ENST00000555880 IGHV3-21A0A0B4J1V1 117 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 BUB1B-PAK6H3BSN5 160 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 LTAP01374 205 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 IGLV1-47P01700 117 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 TCRAP04437 139 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 CRYGBP07316 175 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 FAM87AP0C7U9 286 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 G0S2P27469 103 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 PLP1P60201 277 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 BATFQ16520 125 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 MRGPRG-AS1Q2M3A8 158 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 ASPHD1Q5U4P2 390 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 NIT1Q86X76 327 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 OR2D3Q8NGH3 330 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 TXN2Q99757 166 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 RASL11BQ9BPW5 248 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 ALKBH7Q9BT30 221 aaPredicted RBP5.59□□□□□ -1.51
TDP1-213ENST00000555880 SSBP4Q9BWG4 385 aaPredicted RBP5.59□□□□□ -1.51
TDP1-213ENST00000555880 GFRA4Q9GZZ7 299 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 C7orf69Q9H7B7 122 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 OTORQ9NRC9 128 aa5.59□□□□□ -1.51
TDP1-213ENST00000555880 CEP295Q9C0D2 2601 aa5.59□□□□□ -1.52
TDP1-213ENST00000555880 PPIAL4CA0A0B4J2A2 164 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 A0A1B0GXF2 115 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 K7EQM0 130 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 CNIH1O95406 144 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 PPIAL4GP0DN37 164 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 ZNF25P17030 456 aaPredicted RBP5.58□□□□□ -1.52
TDP1-213ENST00000555880 BTF3P20290 206 aaKnown RBP5.58□□□□□ -1.52
TDP1-213ENST00000555880 COX7A1P24310 79 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 CNTFRP26992 372 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 MMDQ15546 238 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 ZNF124Q15973 351 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 COL5A1-AS1Q5SY13 56 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 RBPMS2Q6ZRY4 209 aaKnown RBP5.58□□□□□ -1.52
TDP1-213ENST00000555880 S100A7AQ86SG5 101 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 C11orf42Q8N5U0 333 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 Q8N976 141 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 Q8NA96 180 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 SRSF12Q8WXF0 261 aaKnown RBP5.58□□□□□ -1.52
TDP1-213ENST00000555880 SGK494Q96LW2 274 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 RNF5Q99942 180 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 SRSF8Q9BRL6 282 aaKnown RBP5.58□□□□□ -1.52
TDP1-213ENST00000555880 KRTAP4-8Q9BYQ9 185 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 TMEM14CQ9P0S9 112 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 RNF114Q9Y508 228 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 APC2O95996 2303 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 ANKHD1Q8IWZ3 2542 aaKnown RBP5.58□□□□□ -1.52
TDP1-213ENST00000555880 TLN1Q9Y490 2541 aaKnown RBP5.58□□□□□ -1.52
TDP1-213ENST00000555880 C20orf202A1L168 122 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 FAM231BA6NCW3 169 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 TEX22C9J3V5 150 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 CHEK1O14757 476 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 IGLC1P0CG04 106 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 PSG1P11464 419 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 CTRLP40313 264 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 GPR6P46095 362 aaPredicted RBP5.58□□□□□ -1.52
TDP1-213ENST00000555880 HNRNPA3P51991 378 aaKnown RBP5.58□□□□□ -1.52
TDP1-213ENST00000555880 GDF5OSQ5U4N7 250 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 LEMD1Q68G75 181 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 ZNF841Q6ZN19 808 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 Q6ZN92 141 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 TCF24Q7RTU0 167 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 Q86TA4 180 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 OR8B3Q8NGG8 313 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 OR8B2Q96RD0 313 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 VKORC1Q9BQB6 163 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 MLST8Q9BVC4 326 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 SLC25A39Q9BZJ4 359 aaPredicted RBP5.58□□□□□ -1.52
TDP1-213ENST00000555880 PRSS22Q9GZN4 317 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 FBXL15Q9H469 300 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 ONECUT1Q9UBC0 465 aa5.58□□□□□ -1.52
TDP1-213ENST00000555880 DCHS1Q96JQ0 3298 aa5.57□□□□□ -1.52
TDP1-213ENST00000555880 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.57□□□□□ -1.52
TDP1-213ENST00000555880 H3BTX0 84 aa5.57□□□□□ -1.52
TDP1-213ENST00000555880 LIPFP07098 398 aa5.57□□□□□ -1.52
TDP1-213ENST00000555880 IGLC2P0DOY2 106 aa5.57□□□□□ -1.52
TDP1-213ENST00000555880 IGLC3P0DOY3 106 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms