RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 BTCP35070 178 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 SRPXP78539 464 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 DHRS2Q13268 280 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 ZFP69Q49AA0 526 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 TMEM128Q5BJH2 165 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 PSMG4Q5JS54 123 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 ACTL10Q5JWF8 245 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 ETFRF1Q6IPR1 90 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 SIGLEC15Q6ZMC9 328 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 STHQ8IWL8 128 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 RPP25LQ8N5L8 163 aaKnown RBP6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 OR1S1Q8NH92 325 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 C17orf77Q96MU5 243 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 SCGB3A2Q96PL1 93 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 CLEC5AQ9NY25 188 aa6.74□□□□□ -1.33
VIPAS39-207ENST00000555854 PKD1P98161 4303 aa6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 ELOA3CA0A087WX78 387 aaPredicted RBP6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 HELTA6NFD8 242 aa6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 INMT-MINDY4F8WBC2 141 aa6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 DEDDO75618 318 aa6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 RD3LP0DJH9 198 aa6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 SPP1P10451 314 aa6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 ANXA3P12429 323 aa6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 VAMP1P23763 118 aa6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 FAUP35544 74 aaKnown RBP6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 GDF5OSQ5U4N7 250 aa6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 TMEM217Q8N7C4 229 aa6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 THAP8Q8NA92 274 aa6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 NARS2Q96I59 477 aaKnown RBP6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 ST6GAL2Q96JF0 529 aa6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 RAB40CQ96S21 281 aa6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 MAGT1Q9H0U3 335 aa6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 NRN1Q9NPD7 142 aa6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 CACFD1Q9UGQ2 172 aa6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 CELA1Q9UNI1 258 aa6.73□□□□□ -1.33
VIPAS39-207ENST00000555854 ABCA13Q86UQ4 5058 aa6.72□□□□□ -1.33
VIPAS39-207ENST00000555854 H3BMM0 161 aa6.72□□□□□ -1.33
VIPAS39-207ENST00000555854 ATP6V1G1O75348 118 aa6.72□□□□□ -1.33
VIPAS39-207ENST00000555854 ADAP1O75689 374 aa6.72□□□□□ -1.33
VIPAS39-207ENST00000555854 IFNA4P05014 189 aa6.72□□□□□ -1.33
VIPAS39-207ENST00000555854 SLC25A6P12236 298 aa6.72□□□□□ -1.33
VIPAS39-207ENST00000555854 GPX4P36969 197 aaPredicted RBP6.72□□□□□ -1.33
VIPAS39-207ENST00000555854 GGNBP1Q5YKI7 109 aa6.72□□□□□ -1.33
VIPAS39-207ENST00000555854 OR8G2PQ6IF36 304 aa6.72□□□□□ -1.33
VIPAS39-207ENST00000555854 MORN3Q6PF18 240 aaPredicted RBP6.72□□□□□ -1.33
VIPAS39-207ENST00000555854 TMEM182Q6ZP80 229 aaPredicted RBP6.72□□□□□ -1.33
VIPAS39-207ENST00000555854 NOXA1Q86UR1 476 aa6.72□□□□□ -1.33
VIPAS39-207ENST00000555854 C11orf45Q8TAV5 145 aa6.72□□□□□ -1.33
VIPAS39-207ENST00000555854 SLC35E1Q96K37 410 aa6.72□□□□□ -1.33
VIPAS39-207ENST00000555854 HYLS1Q96M11 299 aa6.72□□□□□ -1.33
VIPAS39-207ENST00000555854 SLC25A21Q9BQT8 299 aaPredicted RBP6.72□□□□□ -1.33
VIPAS39-207ENST00000555854 PBDC1Q9BVG4 233 aa6.72□□□□□ -1.33
VIPAS39-207ENST00000555854 FBXL17Q9UF56 701 aa6.72□□□□□ -1.33
VIPAS39-207ENST00000555854 FLVCR2Q9UPI3 526 aa6.72□□□□□ -1.33
VIPAS39-207ENST00000555854 C7orf66A4D0T2 115 aa6.71□□□□□ -1.34
VIPAS39-207ENST00000555854 ZFP92A6NM28 416 aa6.71□□□□□ -1.34
VIPAS39-207ENST00000555854 H3BP45 60 aa6.71□□□□□ -1.34
VIPAS39-207ENST00000555854 C1QBP02746 253 aa6.71□□□□□ -1.34
VIPAS39-207ENST00000555854 HOXB5P09067 269 aa6.71□□□□□ -1.34
VIPAS39-207ENST00000555854 HLA-DRB4P13762 266 aa6.71□□□□□ -1.34
VIPAS39-207ENST00000555854 LYZP61626 148 aa6.71□□□□□ -1.34
VIPAS39-207ENST00000555854 RRAS2P62070 204 aaPredicted RBP6.71□□□□□ -1.34
VIPAS39-207ENST00000555854 OR2F1Q13607 317 aa6.71□□□□□ -1.34
VIPAS39-207ENST00000555854 Q6ZTC4 211 aa6.71□□□□□ -1.34
VIPAS39-207ENST00000555854 ASB13Q8WXK3 278 aa6.71□□□□□ -1.34
VIPAS39-207ENST00000555854 TRGV9Q99603 122 aa6.71□□□□□ -1.34
VIPAS39-207ENST00000555854 HRH4Q9H3N8 390 aa6.71□□□□□ -1.34
VIPAS39-207ENST00000555854 SEPSECSQ9HD40 501 aaKnown RBP6.71□□□□□ -1.34
VIPAS39-207ENST00000555854 KLK5Q9Y337 293 aaPredicted RBP6.71□□□□□ -1.34
VIPAS39-207ENST00000555854 TMED3Q9Y3Q3 217 aa6.71□□□□□ -1.34
VIPAS39-207ENST00000555854 HLA-DRB4X5D2U9 266 aa6.71□□□□□ -1.34
VIPAS39-207ENST00000555854 C9orf170A2RU37 121 aa6.7□□□□□ -1.34
VIPAS39-207ENST00000555854 PMS2P5A8MQ11 134 aa6.7□□□□□ -1.34
VIPAS39-207ENST00000555854 SYNGR2O43760 224 aa6.7□□□□□ -1.34
VIPAS39-207ENST00000555854 NDUFB6O95139 128 aa6.7□□□□□ -1.34
VIPAS39-207ENST00000555854 TCRBP04435 133 aa6.7□□□□□ -1.34
VIPAS39-207ENST00000555854 MIFP14174 115 aa6.7□□□□□ -1.34
VIPAS39-207ENST00000555854 GATA2P23769 480 aaPredicted RBP6.7□□□□□ -1.34
VIPAS39-207ENST00000555854 AP2S1P53680 142 aaPredicted RBP6.7□□□□□ -1.34
VIPAS39-207ENST00000555854 ATP5IP56385 69 aaPredicted RBP6.7□□□□□ -1.34
VIPAS39-207ENST00000555854 TMEM41BQ5BJD5 291 aa6.7□□□□□ -1.34
VIPAS39-207ENST00000555854 LGALS9CQ6DKI2 356 aa6.7□□□□□ -1.34
VIPAS39-207ENST00000555854 ACOT7LQ6ZUV0 252 aa6.7□□□□□ -1.34
VIPAS39-207ENST00000555854 ZNF709Q8N972 641 aa6.7□□□□□ -1.34
VIPAS39-207ENST00000555854 OR4D5Q8NGN0 318 aa6.7□□□□□ -1.34
VIPAS39-207ENST00000555854 C20orf173Q96LM9 149 aa6.7□□□□□ -1.34
VIPAS39-207ENST00000555854 SCRT1Q9BWW7 348 aa6.7□□□□□ -1.34
VIPAS39-207ENST00000555854 MFFQ9GZY8 342 aa6.7□□□□□ -1.34
VIPAS39-207ENST00000555854 MED28Q9H204 178 aa6.7□□□□□ -1.34
VIPAS39-207ENST00000555854 APLNQ9ULZ1 77 aa6.7□□□□□ -1.34
VIPAS39-207ENST00000555854 LRP1BQ9NZR2 4599 aa6.69□□□□□ -1.34
VIPAS39-207ENST00000555854 DNAH5Q8TE73 4624 aa6.69□□□□□ -1.34
VIPAS39-207ENST00000555854 F6UB75 175 aa6.69□□□□□ -1.34
VIPAS39-207ENST00000555854 WRBO00258 174 aa6.69□□□□□ -1.34
VIPAS39-207ENST00000555854 IL5P05113 134 aa6.69□□□□□ -1.34
VIPAS39-207ENST00000555854 HLA-DMBP28068 263 aa6.69□□□□□ -1.34
VIPAS39-207ENST00000555854 NKX2-1P43699 371 aaPredicted RBP6.69□□□□□ -1.34
VIPAS39-207ENST00000555854 UBE2MP61081 183 aaKnown RBP6.69□□□□□ -1.34
VIPAS39-207ENST00000555854 SNRPD3P62318 126 aaKnown RBP6.69□□□□□ -1.34
VIPAS39-207ENST00000555854 POLR2GP62487 172 aaKnown RBP eCLIP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms