RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 HRNRQ86YZ3 2850 aaPredicted RBP2.21□□□□□ -2.06
SRP54-209ENST00000555746 NUP210LQ5VU65 1888 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 NYNRINQ9P2P1 1898 aaKnown RBP2.2□□□□□ -2.06
SRP54-209ENST00000555746 TRAV19A0A0A6YYK7 116 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 TRAV8-2A0A0B4J237 113 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 LOC102725191A0A1B0GVB3 256 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 TMEM269A0A1B0GVZ9 245 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 C5orf49A4QMS7 147 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 MEIS3P1A6NDR6 274 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 RBFOX3A6NFN3 312 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 OR4C45A6NMZ5 311 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 RIIAD1A6NNX1 92 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 ZNF850A8MQ14 1090 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.2□□□□□ -2.06
SRP54-209ENST00000555746 SLC37A4O43826 429 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 MAS1P04201 325 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 CRYBA1P05813 215 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 MMP7P09237 267 aaPredicted RBP2.2□□□□□ -2.06
SRP54-209ENST00000555746 CCL4P13236 92 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 SPNP16150 400 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 HIST1H1DP16402 221 aaKnown RBP2.2□□□□□ -2.06
SRP54-209ENST00000555746 HMGA1P17096 107 aaKnown RBP2.2□□□□□ -2.06
SRP54-209ENST00000555746 IMPA1P29218 277 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 PFN2P35080 140 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 GUCA1AP43080 201 aaPredicted RBP2.2□□□□□ -2.06
SRP54-209ENST00000555746 PPICP45877 212 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 IFITM3Q01628 133 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 HSD52Q0P140 79 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 TTC32Q5I0X7 151 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 GLYATL3Q5SZD4 288 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 BCL2L15Q5TBC7 163 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 SPATA31B1PQ5VZV4 182 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 GLIPR1L1Q6UWM5 242 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 IGFL3Q6UXB1 125 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 SCGB1D4Q6XE38 83 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 DGAT2L6Q6ZPD8 337 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 Q6ZS92 163 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 ZNF695Q8IW36 515 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 DEFB125Q8N687 156 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 ZNF433Q8N7K0 673 aaPredicted RBP2.2□□□□□ -2.06
SRP54-209ENST00000555746 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.2□□□□□ -2.06
SRP54-209ENST00000555746 OR11G2Q8NGC1 345 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 OR4K5Q8NGD3 323 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 OR51A4Q8NGJ6 313 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 OR2T4Q8NH00 348 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 TMEM54Q969K7 222 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 ADAT3Q96EY9 351 aaPredicted RBP2.2□□□□□ -2.06
SRP54-209ENST00000555746 GALNT14Q96FL9 552 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 LINC00052Q96N35 136 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 RDH12Q96NR8 316 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 DERL3Q96Q80 235 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 HSD17B10Q99714 261 aaKnown RBP2.2□□□□□ -2.06
SRP54-209ENST00000555746 TMEM222Q9H0R3 208 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 GTSF1LQ9H1H1 148 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 RERGLQ9H628 205 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 OR5AC2Q9NZP5 309 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 COMMD3Q9UBI1 195 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 CYSLTR1Q9Y271 337 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 WASHC3Q9Y3C0 194 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 AP4S1Q9Y587 144 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 YTHDF2Q9Y5A9 579 aaKnown RBP2.2□□□□□ -2.06
SRP54-209ENST00000555746 ORC6Q9Y5N6 252 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 ANKRD12Q6UB98 2062 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 TCHHQ07283 1943 aa2.2□□□□□ -2.06
SRP54-209ENST00000555746 CSMD3Q7Z407 3707 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 hCG_1818297A0A087WSY0 165 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 TMED7-TICAM2A0A0A6YYA0 188 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 TRAV26-2A0A0B4J265 109 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 IGKV6-21A0A0C4DH24 114 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 LOC100130705A0A1B0GUX0 176 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 A0A1B0GW64 132 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 A8MT66 165 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 BBIP1A8MTZ0 92 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 LINC01619G3V211 115 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 J3QT63 122 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 K7EPK0 472 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 PIN1P1O15428 100 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 CD5LO43866 347 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 DPM2O94777 84 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 MPC2O95563 127 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 ZNF682O95780 498 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 AIFM1O95831 613 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 IGKV1D-16P01601 117 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 IGHG2P01859 326 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 IGHMP01871 453 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 ATP5G1P05496 136 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 GPX1P07203 203 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 FGF6P10767 208 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 ZNF14P17017 642 aaPredicted RBP2.19□□□□□ -2.06
SRP54-209ENST00000555746 RPS4Y1P22090 263 aaKnown RBP2.19□□□□□ -2.06
SRP54-209ENST00000555746 PPP1CCP36873 323 aaKnown RBP2.19□□□□□ -2.06
SRP54-209ENST00000555746 ZNF140P52738 457 aaPredicted RBP2.19□□□□□ -2.06
SRP54-209ENST00000555746 CTBP2P56545 445 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 TAS2R19P59542 299 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 DEFA1P59665 94 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 DEFA3P59666 94 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 SNRPD2P62316 118 aaKnown RBP2.19□□□□□ -2.06
SRP54-209ENST00000555746 MEF2BQ02080 365 aaPredicted RBP2.19□□□□□ -2.06
SRP54-209ENST00000555746 ZNF92Q03936 586 aa2.19□□□□□ -2.06
SRP54-209ENST00000555746 TMEM267Q0VDI3 215 aaPredicted RBP2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms