RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 ELOA3CA0A087WX78 387 aaPredicted RBP11.16□□□□□ -0.62
SNX6-205ENST00000555648 LINC00854A0A1B0GVQ3 168 aa11.16□□□□□ -0.62
SNX6-205ENST00000555648 SMCO3A2RU48 225 aa11.16□□□□□ -0.62
SNX6-205ENST00000555648 H3BP45 60 aa11.16□□□□□ -0.62
SNX6-205ENST00000555648 ORM2P19652 201 aa11.16□□□□□ -0.62
SNX6-205ENST00000555648 SPATA31B1PQ5VZV4 182 aa11.16□□□□□ -0.62
SNX6-205ENST00000555648 Q6ZTC4 211 aa11.16□□□□□ -0.62
SNX6-205ENST00000555648 THAP8Q8NA92 274 aa11.16□□□□□ -0.62
SNX6-205ENST00000555648 C16orf92Q96LL3 132 aa11.16□□□□□ -0.62
SNX6-205ENST00000555648 WDR12Q9GZL7 423 aaKnown RBP11.16□□□□□ -0.62
SNX6-205ENST00000555648 SRRQ9GZT4 340 aa11.16□□□□□ -0.62
SNX6-205ENST00000555648 SAV1Q9H4B6 383 aaPredicted RBP11.16□□□□□ -0.62
SNX6-205ENST00000555648 DNAH1Q9P2D7 4330 aa11.16□□□□□ -0.62
SNX6-205ENST00000555648 C9orf170A2RU37 121 aa11.15□□□□□ -0.62
SNX6-205ENST00000555648 ZNF701M0R085 212 aaPredicted RBP11.15□□□□□ -0.62
SNX6-205ENST00000555648 ISLRO14498 428 aa11.15□□□□□ -0.62
SNX6-205ENST00000555648 FXYD7P58549 80 aa11.15□□□□□ -0.62
SNX6-205ENST00000555648 C4orf46Q504U0 113 aa11.15□□□□□ -0.62
SNX6-205ENST00000555648 OR1B1Q8NGR6 318 aa11.15□□□□□ -0.62
SNX6-205ENST00000555648 LYSTQ99698 3801 aa11.15□□□□□ -0.62
SNX6-205ENST00000555648 RPRMQ9NS64 109 aa11.15□□□□□ -0.62
SNX6-205ENST00000555648 PSENENQ9NZ42 101 aa11.15□□□□□ -0.62
SNX6-205ENST00000555648 SLC45A2Q9UMX9 530 aa11.15□□□□□ -0.62
SNX6-205ENST00000555648 TMEM189A5PLL7 270 aa11.14□□□□□ -0.63
SNX6-205ENST00000555648 NDUFB6O95139 128 aa11.14□□□□□ -0.63
SNX6-205ENST00000555648 EMP1P54849 157 aa11.14□□□□□ -0.63
SNX6-205ENST00000555648 PSG9Q00887 426 aa11.14□□□□□ -0.63
SNX6-205ENST00000555648 GDF5OSQ5U4N7 250 aa11.14□□□□□ -0.63
SNX6-205ENST00000555648 ACOT7LQ6ZUV0 252 aa11.14□□□□□ -0.63
SNX6-205ENST00000555648 C7orf50Q9BRJ6 194 aaKnown RBP11.14□□□□□ -0.63
SNX6-205ENST00000555648 RSG1Q9BU20 258 aa11.14□□□□□ -0.63
SNX6-205ENST00000555648 APLNQ9ULZ1 77 aa11.14□□□□□ -0.63
SNX6-205ENST00000555648 GOLT1BQ9Y3E0 138 aa11.14□□□□□ -0.63
SNX6-205ENST00000555648 IGHV4-4A0A075B6R2 117 aa11.13□□□□□ -0.63
SNX6-205ENST00000555648 IGKV1OR2-108A0A075B7D4 117 aa11.13□□□□□ -0.63
SNX6-205ENST00000555648 DEFB131BA0A096LNP1 70 aa11.13□□□□□ -0.63
SNX6-205ENST00000555648 SMIM9A6NGZ8 99 aa11.13□□□□□ -0.63
SNX6-205ENST00000555648 ZNF98A6NK75 572 aa11.13□□□□□ -0.63
SNX6-205ENST00000555648 ADAP1O75689 374 aa11.13□□□□□ -0.63
SNX6-205ENST00000555648 IL5P05113 134 aa11.13□□□□□ -0.63
SNX6-205ENST00000555648 SPART-AS1P0CW21 52 aa11.13□□□□□ -0.63
SNX6-205ENST00000555648 DEFB1P60022 68 aa11.13□□□□□ -0.63
SNX6-205ENST00000555648 RAP2BP61225 183 aa11.13□□□□□ -0.63
SNX6-205ENST00000555648 POLR2GP62487 172 aaKnown RBP eCLIP11.13□□□□□ -0.63
SNX6-205ENST00000555648 ZNF767PQ75MW2 155 aa11.13□□□□□ -0.63
SNX6-205ENST00000555648 S100A7AQ86SG5 101 aa11.13□□□□□ -0.63
SNX6-205ENST00000555648 GPR82Q96P67 336 aa11.13□□□□□ -0.63
SNX6-205ENST00000555648 RNF126Q9BV68 326 aa11.13□□□□□ -0.63
SNX6-205ENST00000555648 SLC25A32Q9H2D1 315 aa11.13□□□□□ -0.63
SNX6-205ENST00000555648 SOCS3O14543 225 aa11.12□□□□□ -0.63
SNX6-205ENST00000555648 SSSCA1O60232 199 aa11.12□□□□□ -0.63
SNX6-205ENST00000555648 SCGB1D2O95969 90 aa11.12□□□□□ -0.63
SNX6-205ENST00000555648 OR4E1P0C645 316 aa11.12□□□□□ -0.63
SNX6-205ENST00000555648 GATA2P23769 480 aaPredicted RBP11.12□□□□□ -0.63
SNX6-205ENST00000555648 ID3Q02535 119 aa11.12□□□□□ -0.63
SNX6-205ENST00000555648 FGL1Q08830 312 aa11.12□□□□□ -0.63
SNX6-205ENST00000555648 BAK1Q16611 211 aa11.12□□□□□ -0.63
SNX6-205ENST00000555648 C12orf74Q32Q52 190 aa11.12□□□□□ -0.63
SNX6-205ENST00000555648 TMEM144Q7Z5S9 345 aa11.12□□□□□ -0.63
SNX6-205ENST00000555648 OR4D5Q8NGN0 318 aa11.12□□□□□ -0.63
SNX6-205ENST00000555648 CLUHP3Q96NS8 147 aa11.12□□□□□ -0.63
SNX6-205ENST00000555648 NEU1Q99519 415 aa11.12□□□□□ -0.63
SNX6-205ENST00000555648 RBM38Q9H0Z9 239 aaKnown RBP11.12□□□□□ -0.63
SNX6-205ENST00000555648 CELA1Q9UNI1 258 aa11.12□□□□□ -0.63
SNX6-205ENST00000555648 FLVCR2Q9UPI3 526 aa11.12□□□□□ -0.63
SNX6-205ENST00000555648 RFNGQ9Y644 331 aa11.12□□□□□ -0.63
SNX6-205ENST00000555648 TEX48A0A1B0GUV7 120 aa11.11□□□□□ -0.63
SNX6-205ENST00000555648 PRSS46E5RG02 174 aa11.11□□□□□ -0.63
SNX6-205ENST00000555648 HBE1P02100 147 aa11.11□□□□□ -0.63
SNX6-205ENST00000555648 FAM78BQ5VT40 261 aa11.11□□□□□ -0.63
SNX6-205ENST00000555648 ZNF705AQ6ZN79 300 aaPredicted RBP11.11□□□□□ -0.63
SNX6-205ENST00000555648 CYP2G1PQ6ZSU1 146 aa11.11□□□□□ -0.63
SNX6-205ENST00000555648 TMEM208Q9BTX3 173 aa11.11□□□□□ -0.63
SNX6-205ENST00000555648 DOK5Q9P104 306 aa11.11□□□□□ -0.63
SNX6-205ENST00000555648 ALMS1Q8TCU4 4167 aa11.1□□□□□ -0.63
SNX6-205ENST00000555648 F6UB75 175 aa11.1□□□□□ -0.63
SNX6-205ENST00000555648 HYPMO75409 117 aa11.1□□□□□ -0.63
SNX6-205ENST00000555648 OR5G3P0C626 314 aa11.1□□□□□ -0.63
SNX6-205ENST00000555648 ANXA7P20073 488 aaKnown RBP11.1□□□□□ -0.63
SNX6-205ENST00000555648 IAH1Q2TAA2 248 aaPredicted RBP11.1□□□□□ -0.63
SNX6-205ENST00000555648 CNPY1Q3B7I2 92 aa11.1□□□□□ -0.63
SNX6-205ENST00000555648 OR10P1Q8NGE3 313 aa11.1□□□□□ -0.63
SNX6-205ENST00000555648 SMIM8Q96KF7 97 aa11.1□□□□□ -0.63
SNX6-205ENST00000555648 NDUFAF3Q9BU61 184 aa11.1□□□□□ -0.63
SNX6-205ENST00000555648 SLC35B3Q9H1N7 401 aa11.1□□□□□ -0.63
SNX6-205ENST00000555648 GSKIPQ9P0R6 139 aa11.1□□□□□ -0.63
SNX6-205ENST00000555648 MGAT4CQ9UBM8 478 aa11.1□□□□□ -0.63
SNX6-205ENST00000555648 HIGD1AQ9Y241 93 aa11.1□□□□□ -0.63
SNX6-205ENST00000555648 AGRNO00468 2067 aa11.1□□□□□ -0.63
SNX6-205ENST00000555648 A0A0J9YX75 114 aa11.09□□□□□ -0.63
SNX6-205ENST00000555648 ZNF705FA8MVS1 300 aaPredicted RBP11.09□□□□□ -0.63
SNX6-205ENST00000555648 DUSP14O95147 198 aaKnown RBP11.09□□□□□ -0.63
SNX6-205ENST00000555648 ZNF705DP0CH99 300 aaPredicted RBP11.09□□□□□ -0.63
SNX6-205ENST00000555648 ZNF705BP0CI00 300 aaPredicted RBP11.09□□□□□ -0.63
SNX6-205ENST00000555648 RPL7P18124 248 aaKnown RBP11.09□□□□□ -0.63
SNX6-205ENST00000555648 PAX9P55771 341 aa11.09□□□□□ -0.63
SNX6-205ENST00000555648 RRAS2P62070 204 aaPredicted RBP11.09□□□□□ -0.63
SNX6-205ENST00000555648 SELENOTP62341 195 aa11.09□□□□□ -0.63
SNX6-205ENST00000555648 PRR20EP86478 221 aa11.09□□□□□ -0.63
SNX6-205ENST00000555648 PRR20CP86479 221 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms