RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 ZNF767PQ75MW2 155 aa8.63□□□□□ -1.03
SHMT2-220ENST00000555634 REC114Q7Z4M0 266 aa8.63□□□□□ -1.03
SHMT2-220ENST00000555634 TMEM190Q8WZ59 177 aa8.63□□□□□ -1.03
SHMT2-220ENST00000555634 CITED1Q99966 193 aa8.63□□□□□ -1.03
SHMT2-220ENST00000555634 ELOVL1Q9BW60 279 aa8.63□□□□□ -1.03
SHMT2-220ENST00000555634 ACTR3CQ9C0K3 210 aaPredicted RBP8.63□□□□□ -1.03
SHMT2-220ENST00000555634 DNAJC4Q9NNZ3 241 aa8.63□□□□□ -1.03
SHMT2-220ENST00000555634 LGALS9O00182 355 aa8.62□□□□□ -1.03
SHMT2-220ENST00000555634 TRBV12-3P01733 135 aa8.62□□□□□ -1.03
SHMT2-220ENST00000555634 NPPCP23582 126 aa8.62□□□□□ -1.03
SHMT2-220ENST00000555634 MYCNOSP40205 109 aa8.62□□□□□ -1.03
SHMT2-220ENST00000555634 PLP1P60201 277 aa8.62□□□□□ -1.03
SHMT2-220ENST00000555634 FAM78BQ5VT40 261 aa8.62□□□□□ -1.03
SHMT2-220ENST00000555634 FAM122CQ6P4D5 195 aa8.62□□□□□ -1.03
SHMT2-220ENST00000555634 TOMM20LQ6UXN7 152 aa8.62□□□□□ -1.03
SHMT2-220ENST00000555634 STXBP6Q8NFX7 210 aa8.62□□□□□ -1.03
SHMT2-220ENST00000555634 FAM213BQ8TBF2 198 aa8.62□□□□□ -1.03
SHMT2-220ENST00000555634 MARC2Q969Z3 335 aa8.62□□□□□ -1.03
SHMT2-220ENST00000555634 GPR82Q96P67 336 aa8.62□□□□□ -1.03
SHMT2-220ENST00000555634 ZNF747Q9BV97 191 aa8.62□□□□□ -1.03
SHMT2-220ENST00000555634 CTXND1A0A1B0GTU2 59 aa8.61□□□□□ -1.03
SHMT2-220ENST00000555634 WI2-2373I1.2A0A1W2PRP0 233 aa8.61□□□□□ -1.03
SHMT2-220ENST00000555634 ZNF705EA8MWA4 302 aaPredicted RBP8.61□□□□□ -1.03
SHMT2-220ENST00000555634 A8MWP6 167 aa8.61□□□□□ -1.03
SHMT2-220ENST00000555634 HBE1P02100 147 aa8.61□□□□□ -1.03
SHMT2-220ENST00000555634 GATA2P23769 480 aaPredicted RBP8.61□□□□□ -1.03
SHMT2-220ENST00000555634 SYNJ2BPP57105 145 aa8.61□□□□□ -1.03
SHMT2-220ENST00000555634 BLOC1S1P78537 153 aa8.61□□□□□ -1.03
SHMT2-220ENST00000555634 LINC00305Q7Z4B0 112 aa8.61□□□□□ -1.03
SHMT2-220ENST00000555634 IQCF2Q8IXL9 164 aa8.61□□□□□ -1.03
SHMT2-220ENST00000555634 DYNLRB2Q8TF09 96 aa8.61□□□□□ -1.03
SHMT2-220ENST00000555634 RAX2Q96IS3 184 aa8.61□□□□□ -1.03
SHMT2-220ENST00000555634 ZFAND3Q9H8U3 227 aa8.61□□□□□ -1.03
SHMT2-220ENST00000555634 SLC25A22Q9H936 323 aa8.61□□□□□ -1.03
SHMT2-220ENST00000555634 TECRQ9NZ01 308 aaKnown RBP8.61□□□□□ -1.03
SHMT2-220ENST00000555634 FUT9Q9Y231 359 aa8.61□□□□□ -1.03
SHMT2-220ENST00000555634 ANK3Q12955 4377 aaKnown RBP8.6□□□□□ -1.03
SHMT2-220ENST00000555634 K7EMT4 169 aa8.6□□□□□ -1.03
SHMT2-220ENST00000555634 OVOL1O14753 267 aa8.6□□□□□ -1.03
SHMT2-220ENST00000555634 OR7C2O60412 319 aa8.6□□□□□ -1.03
SHMT2-220ENST00000555634 CD5P06127 495 aa8.6□□□□□ -1.03
SHMT2-220ENST00000555634 RPL7P18124 248 aaKnown RBP8.6□□□□□ -1.03
SHMT2-220ENST00000555634 GALR1P47211 349 aa8.6□□□□□ -1.03
SHMT2-220ENST00000555634 SULT1A2P50226 295 aa8.6□□□□□ -1.03
SHMT2-220ENST00000555634 SLURP1P55000 103 aa8.6□□□□□ -1.03
SHMT2-220ENST00000555634 FHL3Q13643 280 aa8.6□□□□□ -1.03
SHMT2-220ENST00000555634 USF2Q15853 346 aaPredicted RBP8.6□□□□□ -1.03
SHMT2-220ENST00000555634 ZNF680Q8NEM1 530 aa8.6□□□□□ -1.03
SHMT2-220ENST00000555634 OR9G4Q8NGQ1 327 aa8.6□□□□□ -1.03
SHMT2-220ENST00000555634 IGHV3OR16-8A0A075B7F1 116 aa8.59□□□□□ -1.03
SHMT2-220ENST00000555634 MAP1LC3B2A6NCE7 125 aa8.59□□□□□ -1.03
SHMT2-220ENST00000555634 HELTA6NFD8 242 aa8.59□□□□□ -1.03
SHMT2-220ENST00000555634 IFNA1P01562 189 aa8.59□□□□□ -1.03
SHMT2-220ENST00000555634 ATF4P18848 351 aaPredicted RBP8.59□□□□□ -1.03
SHMT2-220ENST00000555634 MEOX2P50222 304 aa8.59□□□□□ -1.03
SHMT2-220ENST00000555634 C1orf194Q5T5A4 169 aa8.59□□□□□ -1.03
SHMT2-220ENST00000555634 SAMD13Q5VXD3 122 aa8.59□□□□□ -1.03
SHMT2-220ENST00000555634 PQLC2Q6ZP29 291 aa8.59□□□□□ -1.03
SHMT2-220ENST00000555634 C18orf65Q6ZTR6 163 aa8.59□□□□□ -1.03
SHMT2-220ENST00000555634 BPIFA4PQ86YQ2 179 aa8.59□□□□□ -1.03
SHMT2-220ENST00000555634 OR8I2Q8N0Y5 310 aa8.59□□□□□ -1.03
SHMT2-220ENST00000555634 SAT2Q96F10 170 aaPredicted RBP8.59□□□□□ -1.03
SHMT2-220ENST00000555634 RCC1LQ96I51 464 aaKnown RBP8.59□□□□□ -1.03
SHMT2-220ENST00000555634 SHANK2-AS3Q9BTD1 123 aa8.59□□□□□ -1.03
SHMT2-220ENST00000555634 SLC25A39Q9BZJ4 359 aaPredicted RBP8.59□□□□□ -1.03
SHMT2-220ENST00000555634 GPR61Q9BZJ8 451 aa8.59□□□□□ -1.03
SHMT2-220ENST00000555634 MAP1LC3BQ9GZQ8 125 aa8.59□□□□□ -1.03
SHMT2-220ENST00000555634 MRPL27Q9P0M9 148 aaKnown RBP8.59□□□□□ -1.03
SHMT2-220ENST00000555634 CUBNO60494 3623 aa8.59□□□□□ -1.03
SHMT2-220ENST00000555634 ATRQ13535 2644 aa8.58□□□□□ -1.04
SHMT2-220ENST00000555634 IGHV7-4-1A0A0J9YVY3 117 aa8.58□□□□□ -1.04
SHMT2-220ENST00000555634 SEC14L6B5MCN3 397 aa8.58□□□□□ -1.04
SHMT2-220ENST00000555634 H3BRN7 92 aa8.58□□□□□ -1.04
SHMT2-220ENST00000555634 ZNF207O43670 478 aaKnown RBP8.58□□□□□ -1.04
SHMT2-220ENST00000555634 CXorf1O96002 111 aa8.58□□□□□ -1.04
SHMT2-220ENST00000555634 H2AFB1P0C5Y9 115 aa8.58□□□□□ -1.04
SHMT2-220ENST00000555634 C8orf88P0DMB2 117 aa8.58□□□□□ -1.04
SHMT2-220ENST00000555634 CRYBB3P26998 211 aa8.58□□□□□ -1.04
SHMT2-220ENST00000555634 PPT1P50897 306 aa8.58□□□□□ -1.04
SHMT2-220ENST00000555634 UBE2L3P68036 154 aaKnown RBP8.58□□□□□ -1.04
SHMT2-220ENST00000555634 KLF5Q13887 457 aaPredicted RBP8.58□□□□□ -1.04
SHMT2-220ENST00000555634 FAM74A1Q5RGS3 127 aa8.58□□□□□ -1.04
SHMT2-220ENST00000555634 UNQ9165/PRO28630Q6UXU0 137 aa8.58□□□□□ -1.04
SHMT2-220ENST00000555634 DUX3Q96PT4 197 aa8.58□□□□□ -1.04
SHMT2-220ENST00000555634 UHRF2Q96PU4 802 aa8.58□□□□□ -1.04
SHMT2-220ENST00000555634 MCRIP2Q9BUT9 160 aaKnown RBP8.58□□□□□ -1.04
SHMT2-220ENST00000555634 RPRMQ9NS64 109 aa8.58□□□□□ -1.04
SHMT2-220ENST00000555634 CD33P20138 364 aa8.57□□□□□ -1.04
SHMT2-220ENST00000555634 KRTAP10-3P60369 221 aa8.57□□□□□ -1.04
SHMT2-220ENST00000555634 RPL11P62913 178 aaKnown RBP8.57□□□□□ -1.04
SHMT2-220ENST00000555634 GUK1Q16774 197 aa8.57□□□□□ -1.04
SHMT2-220ENST00000555634 GCSAMLQ5JQS6 135 aa8.57□□□□□ -1.04
SHMT2-220ENST00000555634 SFT2D1Q8WV19 159 aa8.57□□□□□ -1.04
SHMT2-220ENST00000555634 TMEM37Q8WXS4 190 aa8.57□□□□□ -1.04
SHMT2-220ENST00000555634 RAB24Q969Q5 203 aa8.57□□□□□ -1.04
SHMT2-220ENST00000555634 SCRT1Q9BWW7 348 aa8.57□□□□□ -1.04
SHMT2-220ENST00000555634 TMEM167BQ9NRX6 74 aa8.57□□□□□ -1.04
SHMT2-220ENST00000555634 C2orf70A6NJV1 201 aa8.56□□□□□ -1.04
SHMT2-220ENST00000555634 ZNF98A6NK75 572 aa8.56□□□□□ -1.04
SHMT2-220ENST00000555634 ADARB2-AS1A8MUL3 147 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms