RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 TRAV10A0A0B4J240 114 aa0.03□□□□□ -2.4
SRP54-207ENST00000555535 C5orf67F2Z3F1 127 aa0.03□□□□□ -2.4
SRP54-207ENST00000555535 NDUFB3O43676 98 aa0.03□□□□□ -2.4
SRP54-207ENST00000555535 PPYP01298 95 aa0.03□□□□□ -2.4
SRP54-207ENST00000555535 RPS17P08708 135 aaKnown RBP0.03□□□□□ -2.4
SRP54-207ENST00000555535 HOXA6P31267 233 aa0.03□□□□□ -2.4
SRP54-207ENST00000555535 SRP14P37108 136 aaKnown RBP0.03□□□□□ -2.4
SRP54-207ENST00000555535 SERPINB9P50453 376 aa0.03□□□□□ -2.4
SRP54-207ENST00000555535 EIF5AP63241 154 aaKnown RBP0.03□□□□□ -2.4
SRP54-207ENST00000555535 ACOT6Q3I5F7 207 aaPredicted RBP0.03□□□□□ -2.4
SRP54-207ENST00000555535 C2orf82Q6UX34 121 aa0.03□□□□□ -2.4
SRP54-207ENST00000555535 LINC00575Q6W349 94 aa0.03□□□□□ -2.4
SRP54-207ENST00000555535 EXOC3-AS1Q8N2X6 119 aa0.03□□□□□ -2.4
SRP54-207ENST00000555535 GDPD1Q8N9F7 314 aa0.03□□□□□ -2.4
SRP54-207ENST00000555535 Q8TAT8 98 aa0.03□□□□□ -2.4
SRP54-207ENST00000555535 STAG3L4Q8TBR4 150 aa0.03□□□□□ -2.4
SRP54-207ENST00000555535 CCDC42Q96M95 316 aa0.03□□□□□ -2.4
SRP54-207ENST00000555535 TP53RKQ96S44 253 aa0.03□□□□□ -2.4
SRP54-207ENST00000555535 GPER1Q99527 375 aa0.03□□□□□ -2.4
SRP54-207ENST00000555535 FAM103A1Q9BTL3 118 aaKnown RBP0.03□□□□□ -2.4
SRP54-207ENST00000555535 RNASE7Q9H1E1 156 aaKnown RBP0.03□□□□□ -2.4
SRP54-207ENST00000555535 UQCC1Q9NVA1 299 aa0.03□□□□□ -2.4
SRP54-207ENST00000555535 IDI2-AS1Q9NZ38 188 aa0.03□□□□□ -2.4
SRP54-207ENST00000555535 MRPL27Q9P0M9 148 aaKnown RBP0.03□□□□□ -2.4
SRP54-207ENST00000555535 OPTCQ9UBM4 332 aa0.03□□□□□ -2.4
SRP54-207ENST00000555535 OR52A1Q9UKL2 312 aa0.03□□□□□ -2.4
SRP54-207ENST00000555535 CHCHD2Q9Y6H1 151 aaPredicted RBP0.03□□□□□ -2.4
SRP54-207ENST00000555535 CECR2Q9BXF3 1484 aa0.03□□□□□ -2.41
SRP54-207ENST00000555535 NINQ8N4C6 2090 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 COL24A1Q17RW2 1714 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 ANK1P16157 1881 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 hADV38S2A0JD32 116 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 CLDN24A6NM45 220 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 B4DSR2 109 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 CETN3O15182 167 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 NUPR1O60356 82 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 DHFRP00374 187 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 CD3DP04234 171 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 IFNA16P05015 189 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 CD14P08571 375 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 NKX2-5P52952 324 aaPredicted RBP0.02□□□□□ -2.41
SRP54-207ENST00000555535 KRR1Q13601 381 aaKnown RBP0.02□□□□□ -2.41
SRP54-207ENST00000555535 HIST3H3Q16695 136 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 C4orf22Q6V702 233 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 TRAPPC5Q8IUR0 188 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 PDZD9Q8IXQ8 264 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 OR6V1Q8N148 313 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 CLDN22Q8N7P3 220 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 CT55Q8WUE5 264 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 SLC25A21Q9BQT8 299 aaPredicted RBP0.02□□□□□ -2.41
SRP54-207ENST00000555535 VPS29Q9UBQ0 182 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 MYH3P11055 1940 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 APCP25054 2843 aa0.02□□□□□ -2.41
SRP54-207ENST00000555535 RBBP6Q7Z6E9 1792 aaKnown RBP0.01□□□□□ -2.41
SRP54-207ENST00000555535 IGLV3-32A0A0A0MS00 114 aa0.01□□□□□ -2.41
SRP54-207ENST00000555535 JMJD7-PLA2G4BH0Y9G9 81 aa0.01□□□□□ -2.41
SRP54-207ENST00000555535 M0R233 179 aa0.01□□□□□ -2.41
SRP54-207ENST00000555535 ERC2-IT1O76042 136 aa0.01□□□□□ -2.41
SRP54-207ENST00000555535 TTRP02766 147 aa0.01□□□□□ -2.41
SRP54-207ENST00000555535 PPIBP23284 216 aaKnown RBP0.01□□□□□ -2.41
SRP54-207ENST00000555535 C12orf74Q32Q52 190 aa0.01□□□□□ -2.41
SRP54-207ENST00000555535 LYRM7Q5U5X0 104 aa0.01□□□□□ -2.41
SRP54-207ENST00000555535 OR10K1Q8NGX5 313 aa0.01□□□□□ -2.41
SRP54-207ENST00000555535 ITFG2Q969R8 447 aa0.01□□□□□ -2.41
SRP54-207ENST00000555535 RAB37Q96AX2 223 aa0.01□□□□□ -2.41
SRP54-207ENST00000555535 PRRT1Q99946 306 aa0.01□□□□□ -2.41
SRP54-207ENST00000555535 PARD6GQ9BYG4 376 aaPredicted RBP0.01□□□□□ -2.41
SRP54-207ENST00000555535 PRELID3BQ9Y3B1 194 aa0.01□□□□□ -2.41
SRP54-207ENST00000555535 TNS3Q68CZ2 1445 aa0.01□□□□□ -2.41
SRP54-207ENST00000555535 NEO1Q92859 1461 aa0.01□□□□□ -2.41
SRP54-207ENST00000555535 TANC2Q9HCD6 1990 aa0.01□□□□□ -2.41
SRP54-207ENST00000555535 TRBV30A0A0K0K1B3 111 aa0□□□□□ -2.41
SRP54-207ENST00000555535 M0R036 132 aa0□□□□□ -2.41
SRP54-207ENST00000555535 KDM6AO15550 1401 aaPredicted RBP0□□□□□ -2.41
SRP54-207ENST00000555535 PDE6DO43924 150 aa0□□□□□ -2.41
SRP54-207ENST00000555535 PIK3C2GO75747 1445 aa0□□□□□ -2.41
SRP54-207ENST00000555535 C8GP07360 202 aa0□□□□□ -2.41
SRP54-207ENST00000555535 RNASE4P34096 147 aaKnown RBP0□□□□□ -2.41
SRP54-207ENST00000555535 AFDNP55196 1824 aaKnown RBP0□□□□□ -2.41
SRP54-207ENST00000555535 PIGPP57054 158 aa0□□□□□ -2.41
SRP54-207ENST00000555535 QRFPP83859 136 aa0□□□□□ -2.41
SRP54-207ENST00000555535 CDK6Q00534 326 aa0□□□□□ -2.41
SRP54-207ENST00000555535 ITGB3BPQ13352 177 aaPredicted RBP0□□□□□ -2.41
SRP54-207ENST00000555535 SPATA45Q537H7 98 aa0□□□□□ -2.41
SRP54-207ENST00000555535 BCL2L15Q5TBC7 163 aa0□□□□□ -2.41
SRP54-207ENST00000555535 C1orf134Q5TEV5 83 aa0□□□□□ -2.41
SRP54-207ENST00000555535 Q6Q795 121 aa0□□□□□ -2.41
SRP54-207ENST00000555535 GLIPR1L1Q6UWM5 242 aa0□□□□□ -2.41
SRP54-207ENST00000555535 SPINK6Q6UWN8 80 aa0□□□□□ -2.41
SRP54-207ENST00000555535 Q6ZS92 163 aa0□□□□□ -2.41
SRP54-207ENST00000555535 ZNF833PQ6ZTB9 187 aa0□□□□□ -2.41
SRP54-207ENST00000555535 GRINAQ7Z429 371 aa0□□□□□ -2.41
SRP54-207ENST00000555535 OR51A2Q8NGJ7 313 aa0□□□□□ -2.41
SRP54-207ENST00000555535 CANT1Q8WVQ1 401 aa0□□□□□ -2.41
SRP54-207ENST00000555535 ZC2HC1AQ96GY0 325 aa0□□□□□ -2.41
SRP54-207ENST00000555535 TRIM4Q9C037 500 aa0□□□□□ -2.41
SRP54-207ENST00000555535 PBOV1Q9GZY1 135 aa0□□□□□ -2.41
SRP54-207ENST00000555535 TVP23BQ9NYZ1 205 aa0□□□□□ -2.41
SRP54-207ENST00000555535 GLTPQ9NZD2 209 aa0□□□□□ -2.41
SRP54-207ENST00000555535 LY96Q9Y6Y9 160 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms