RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 RNF24Q9Y225 148 aa13.65□□□□□ -0.22
PSEN1-212ENST00000555254 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.64□□□□□ -0.23
PSEN1-212ENST00000555254 IL4P05112 153 aa13.64□□□□□ -0.23
PSEN1-212ENST00000555254 C8orf88P0DMB2 117 aa13.64□□□□□ -0.23
PSEN1-212ENST00000555254 ARL3P36405 182 aa13.64□□□□□ -0.23
PSEN1-212ENST00000555254 KRTAP10-3P60369 221 aa13.64□□□□□ -0.23
PSEN1-212ENST00000555254 KHDC3LQ587J8 217 aa13.64□□□□□ -0.23
PSEN1-212ENST00000555254 UQCC3Q6UW78 93 aa13.64□□□□□ -0.23
PSEN1-212ENST00000555254 CCDC140Q96MF4 163 aa13.64□□□□□ -0.23
PSEN1-212ENST00000555254 EIF5A2Q9GZV4 153 aaKnown RBP13.64□□□□□ -0.23
PSEN1-212ENST00000555254 WI2-2373I1.2A0A1W2PRP0 233 aa13.63□□□□□ -0.23
PSEN1-212ENST00000555254 OR2C1O95371 312 aa13.63□□□□□ -0.23
PSEN1-212ENST00000555254 IGHV3-11P01762 117 aa13.63□□□□□ -0.23
PSEN1-212ENST00000555254 TAGLN2P37802 199 aaKnown RBP13.63□□□□□ -0.23
PSEN1-212ENST00000555254 CCL20P78556 96 aa13.63□□□□□ -0.23
PSEN1-212ENST00000555254 ZNF343Q6P1L6 599 aa13.63□□□□□ -0.23
PSEN1-212ENST00000555254 MIR17HGQ75NE6 70 aa13.63□□□□□ -0.23
PSEN1-212ENST00000555254 EIF4E3Q8N5X7 224 aaKnown RBP13.63□□□□□ -0.23
PSEN1-212ENST00000555254 KLHDC1Q8N7A1 406 aa13.63□□□□□ -0.23
PSEN1-212ENST00000555254 TMEM37Q8WXS4 190 aa13.63□□□□□ -0.23
PSEN1-212ENST00000555254 RNF125Q96EQ8 232 aa13.63□□□□□ -0.23
PSEN1-212ENST00000555254 CHRDL1Q9BU40 450 aa13.63□□□□□ -0.23
PSEN1-212ENST00000555254 SEPSECSQ9HD40 501 aaKnown RBP13.63□□□□□ -0.23
PSEN1-212ENST00000555254 TREM1Q9NP99 234 aa13.63□□□□□ -0.23
PSEN1-212ENST00000555254 GNG13Q9P2W3 67 aa13.63□□□□□ -0.23
PSEN1-212ENST00000555254 ANKRD34BA5PLL1 514 aa13.62□□□□□ -0.23
PSEN1-212ENST00000555254 BMPR1BO00238 502 aa13.62□□□□□ -0.23
PSEN1-212ENST00000555254 ATP6V1G1O75348 118 aa13.62□□□□□ -0.23
PSEN1-212ENST00000555254 STAG3L2P0CL84 134 aa13.62□□□□□ -0.23
PSEN1-212ENST00000555254 STAG3L3P0CL85 134 aa13.62□□□□□ -0.23
PSEN1-212ENST00000555254 PSMB3P49720 205 aa13.62□□□□□ -0.23
PSEN1-212ENST00000555254 GUK1Q16774 197 aa13.62□□□□□ -0.23
PSEN1-212ENST00000555254 SPATA31B1PQ5VZV4 182 aa13.62□□□□□ -0.23
PSEN1-212ENST00000555254 PATE2Q6UY27 113 aa13.62□□□□□ -0.23
PSEN1-212ENST00000555254 PQLC2Q6ZP29 291 aa13.62□□□□□ -0.23
PSEN1-212ENST00000555254 LCNL1Q6ZST4 164 aa13.62□□□□□ -0.23
PSEN1-212ENST00000555254 SSX7Q7RTT5 188 aa13.62□□□□□ -0.23
PSEN1-212ENST00000555254 LINC00305Q7Z4B0 112 aa13.62□□□□□ -0.23
PSEN1-212ENST00000555254 ZNF491Q8N8L2 437 aa13.62□□□□□ -0.23
PSEN1-212ENST00000555254 C11orf44Q8N8P7 122 aa13.62□□□□□ -0.23
PSEN1-212ENST00000555254 STXBP6Q8NFX7 210 aa13.62□□□□□ -0.23
PSEN1-212ENST00000555254 OR5AU1Q8NGC0 362 aa13.62□□□□□ -0.23
PSEN1-212ENST00000555254 FAM210AQ96ND0 272 aa13.62□□□□□ -0.23
PSEN1-212ENST00000555254 PUS1Q9Y606 427 aaKnown RBP eCLIP13.62□□□□□ -0.23
PSEN1-212ENST00000555254 RBFOX3A6NFN3 312 aa13.61□□□□□ -0.23
PSEN1-212ENST00000555254 OR7C2O60412 319 aa13.61□□□□□ -0.23
PSEN1-212ENST00000555254 GGCTO75223 188 aaKnown RBP13.61□□□□□ -0.23
PSEN1-212ENST00000555254 EIF3GO75821 320 aaKnown RBP eCLIP13.61□□□□□ -0.23
PSEN1-212ENST00000555254 RPLP1P05386 114 aaKnown RBP13.61□□□□□ -0.23
PSEN1-212ENST00000555254 ADMP35318 185 aa13.61□□□□□ -0.23
PSEN1-212ENST00000555254 PMS2P11Q13670 270 aa13.61□□□□□ -0.23
PSEN1-212ENST00000555254 HIST2H2BDQ6DRA6 164 aa13.61□□□□□ -0.23
PSEN1-212ENST00000555254 MANBALQ9NQG1 85 aa13.61□□□□□ -0.23
PSEN1-212ENST00000555254 TMEM167BQ9NRX6 74 aa13.61□□□□□ -0.23
PSEN1-212ENST00000555254 MRPL27Q9P0M9 148 aaKnown RBP13.61□□□□□ -0.23
PSEN1-212ENST00000555254 PEF1Q9UBV8 284 aaKnown RBP13.61□□□□□ -0.23
PSEN1-212ENST00000555254 RABAC1Q9UI14 185 aa13.61□□□□□ -0.23
PSEN1-212ENST00000555254 ARL14EPLP0DKL9 152 aa13.6□□□□□ -0.23
PSEN1-212ENST00000555254 S100A1P23297 94 aa13.6□□□□□ -0.23
PSEN1-212ENST00000555254 GCHFRP30047 84 aa13.6□□□□□ -0.23
PSEN1-212ENST00000555254 HAGHQ16775 308 aa13.6□□□□□ -0.23
PSEN1-212ENST00000555254 TOR2AQ5JU69 321 aa13.6□□□□□ -0.23
PSEN1-212ENST00000555254 RNF152Q8N8N0 203 aa13.6□□□□□ -0.23
PSEN1-212ENST00000555254 NARS2Q96I59 477 aaKnown RBP13.6□□□□□ -0.23
PSEN1-212ENST00000555254 UBE2E2Q96LR5 201 aa13.6□□□□□ -0.23
PSEN1-212ENST00000555254 CITED1Q99966 193 aa13.6□□□□□ -0.23
PSEN1-212ENST00000555254 MGAM2Q2M2H8 2515 aa13.59□□□□□ -0.23
PSEN1-212ENST00000555254 PPP5D1E7EU14 171 aa13.59□□□□□ -0.23
PSEN1-212ENST00000555254 C10orf99Q6UWK7 81 aa13.59□□□□□ -0.23
PSEN1-212ENST00000555254 TOMM20LQ6UXN7 152 aa13.59□□□□□ -0.23
PSEN1-212ENST00000555254 UHRF2Q96PU4 802 aa13.59□□□□□ -0.23
PSEN1-212ENST00000555254 OR5B12Q96R08 314 aa13.59□□□□□ -0.23
PSEN1-212ENST00000555254 PAXXQ9BUH6 204 aa13.59□□□□□ -0.23
PSEN1-212ENST00000555254 SLC25A39Q9BZJ4 359 aaPredicted RBP13.59□□□□□ -0.23
PSEN1-212ENST00000555254 TMPRSS5Q9H3S3 457 aa13.59□□□□□ -0.23
PSEN1-212ENST00000555254 SMDT1Q9H4I9 107 aa13.59□□□□□ -0.23
PSEN1-212ENST00000555254 TRAV5A0A0B4J249 113 aa13.58□□□□□ -0.24
PSEN1-212ENST00000555254 IGHV3-35A0A0C4DH35 117 aa13.58□□□□□ -0.24
PSEN1-212ENST00000555254 FAM106AQ4KMX7 169 aa13.58□□□□□ -0.24
PSEN1-212ENST00000555254 METTL26Q96S19 204 aa13.58□□□□□ -0.24
PSEN1-212ENST00000555254 SHANK2-AS3Q9BTD1 123 aa13.58□□□□□ -0.24
PSEN1-212ENST00000555254 OR51M1Q9H341 326 aa13.58□□□□□ -0.24
PSEN1-212ENST00000555254 VAX2Q9UIW0 290 aa13.58□□□□□ -0.24
PSEN1-212ENST00000555254 I3L521 148 aa13.57□□□□□ -0.24
PSEN1-212ENST00000555254 NDUFA4O00483 81 aa13.57□□□□□ -0.24
PSEN1-212ENST00000555254 LGALS1P09382 135 aaKnown RBP13.57□□□□□ -0.24
PSEN1-212ENST00000555254 BCL2P10415 239 aa13.57□□□□□ -0.24
PSEN1-212ENST00000555254 KIAA0141Q14154 515 aaPredicted RBP13.57□□□□□ -0.24
PSEN1-212ENST00000555254 KHDC1LQ5JSQ8 128 aa13.57□□□□□ -0.24
PSEN1-212ENST00000555254 ZNF506Q5JVG8 444 aa13.57□□□□□ -0.24
PSEN1-212ENST00000555254 MYOZ3Q8TDC0 251 aa13.57□□□□□ -0.24
PSEN1-212ENST00000555254 C20orf24Q9BUV8 137 aa13.57□□□□□ -0.24
PSEN1-212ENST00000555254 SLC25A2Q9BXI2 301 aa13.57□□□□□ -0.24
PSEN1-212ENST00000555254 LOC102723971A0A1B0GUV8 181 aa13.56□□□□□ -0.24
PSEN1-212ENST00000555254 H3BRN7 92 aa13.56□□□□□ -0.24
PSEN1-212ENST00000555254 CD28P10747 220 aa13.56□□□□□ -0.24
PSEN1-212ENST00000555254 NPPCP23582 126 aa13.56□□□□□ -0.24
PSEN1-212ENST00000555254 UBE2L3P68036 154 aaKnown RBP13.56□□□□□ -0.24
PSEN1-212ENST00000555254 USF2Q15853 346 aaPredicted RBP13.56□□□□□ -0.24
PSEN1-212ENST00000555254 RXFP4Q8TDU9 374 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms